RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 CDC42BPBQ9Y5S2 1711 aa26.55■■□□□ 1.84
PHGDH-214ENST00000641314 ZNF644Q9H582 1327 aaPredicted RBP26.55■■□□□ 1.84
PHGDH-214ENST00000641314 CAMSAP2Q08AD1 1489 aa26.53■■□□□ 1.84
PHGDH-214ENST00000641314 ABCA9Q8IUA7 1624 aa26.52■■□□□ 1.84
PHGDH-214ENST00000641314 ARHGAP5Q13017 1502 aa26.52■■□□□ 1.84
PHGDH-214ENST00000641314 PLCH2O75038 1416 aa26.48■■□□□ 1.83
PHGDH-214ENST00000641314 SAMD9LQ8IVG5 1584 aa26.45■■□□□ 1.82
PHGDH-214ENST00000641314 DNMT1P26358 1616 aaKnown RBP26.44■■□□□ 1.82
PHGDH-214ENST00000641314 PTPRKQ15262 1439 aa26.43■■□□□ 1.82
PHGDH-214ENST00000641314 DAPK1P53355 1430 aa26.42■■□□□ 1.82
PHGDH-214ENST00000641314 ARAP3Q8WWN8 1544 aa26.4■■□□□ 1.82
PHGDH-214ENST00000641314 EFCAB2Q5VUJ9 269 aa26.4■■□□□ 1.82
PHGDH-214ENST00000641314 ABCC5O15440 1437 aa26.39■■□□□ 1.81
PHGDH-214ENST00000641314 CD109Q6YHK3 1445 aa26.37■■□□□ 1.81
PHGDH-214ENST00000641314 CHIC2Q9UKJ5 165 aa26.37■■□□□ 1.81
PHGDH-214ENST00000641314 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.811e-6■■■■□ 22.8
PHGDH-214ENST00000641314 SYCP2Q9BX26 1530 aa26.36■■□□□ 1.81
PHGDH-214ENST00000641314 PLEKHH2Q8IVE3 1493 aa26.35■■□□□ 1.81
PHGDH-214ENST00000641314 DIP2BQ9P265 1576 aa26.34■■□□□ 1.81
PHGDH-214ENST00000641314 CROCC2H7BZ55 1655 aa26.34■■□□□ 1.81
PHGDH-214ENST00000641314 FANCAO15360 1455 aa26.34■■□□□ 1.81
PHGDH-214ENST00000641314 GLI2P10070 1586 aa26.34■■□□□ 1.81
PHGDH-214ENST00000641314 ARHGEF5Q12774 1597 aa26.32■■□□□ 1.8
PHGDH-214ENST00000641314 MBD5Q9P267 1494 aa26.31■■□□□ 1.8
PHGDH-214ENST00000641314 FAM69CQ0P6D2 419 aa26.31■■□□□ 1.8
PHGDH-214ENST00000641314 ABCC1P33527 1531 aa26.31■■□□□ 1.8
PHGDH-214ENST00000641314 MAP3K4Q9Y6R4 1608 aa26.3■■□□□ 1.8
PHGDH-214ENST00000641314 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
PHGDH-214ENST00000641314 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
PHGDH-214ENST00000641314 CCDC141Q6ZP82 1450 aa26.29■■□□□ 1.8
PHGDH-214ENST00000641314 AKNAQ7Z591 1439 aa26.28■■□□□ 1.8
PHGDH-214ENST00000641314 ARHGEF12Q9NZN5 1544 aa26.27■■□□□ 1.8
PHGDH-214ENST00000641314 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
PHGDH-214ENST00000641314 ADGBQ8N7X0 1667 aa26.26■■□□□ 1.79
PHGDH-214ENST00000641314 CFAP74Q9C0B2 1584 aa26.26■■□□□ 1.79
PHGDH-214ENST00000641314 HFM1A2PYH4 1435 aa26.26■■□□□ 1.79
PHGDH-214ENST00000641314 RAB3GAP2Q9H2M9 1393 aa26.25■■□□□ 1.79
PHGDH-214ENST00000641314 SHANK2Q9UPX8 1470 aa26.25■■□□□ 1.79
PHGDH-214ENST00000641314 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
PHGDH-214ENST00000641314 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
PHGDH-214ENST00000641314 RSPH4AQ5TD94 716 aa26.24■■□□□ 1.79
PHGDH-214ENST00000641314 ROCK1Q13464 1354 aa26.24■■□□□ 1.79
PHGDH-214ENST00000641314 C9orf84Q5VXU9 1444 aa26.23■■□□□ 1.79
PHGDH-214ENST00000641314 ADGRL1O94910 1474 aa26.23■■□□□ 1.79
PHGDH-214ENST00000641314 NAIPQ13075 1403 aa26.23■■□□□ 1.79
PHGDH-214ENST00000641314 GCC2Q8IWJ2 1684 aa26.22■■□□□ 1.79
PHGDH-214ENST00000641314 KIF13AQ9H1H9 1805 aa26.21■■□□□ 1.79
PHGDH-214ENST00000641314 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
PHGDH-214ENST00000641314 TRAPPC8Q9Y2L5 1435 aa26.2■■□□□ 1.78
PHGDH-214ENST00000641314 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
PHGDH-214ENST00000641314 TSPOAP1O95153 1857 aa26.19■■□□□ 1.78
PHGDH-214ENST00000641314 ANKRD30AQ9BXX3 1397 aa26.18■■□□□ 1.78
PHGDH-214ENST00000641314 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
PHGDH-214ENST00000641314 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
PHGDH-214ENST00000641314 NEO1Q92859 1461 aa26.16■■□□□ 1.78
PHGDH-214ENST00000641314 MAST1Q9Y2H9 1570 aa26.15■■□□□ 1.78
PHGDH-214ENST00000641314 PPRC1Q5VV67 1664 aaKnown RBP26.13■■□□□ 1.77
PHGDH-214ENST00000641314 AFAP1Q8N556 730 aa26.12■■□□□ 1.77
PHGDH-214ENST00000641314 KDM6BO15054 1643 aa26.11■■□□□ 1.77
PHGDH-214ENST00000641314 HRCP23327 699 aa26.1■■□□□ 1.77
PHGDH-214ENST00000641314 SPAG9O60271 1321 aaKnown RBP26.09■■□□□ 1.77
PHGDH-214ENST00000641314 TEX14Q8IWB6 1497 aa26.09■■□□□ 1.77
PHGDH-214ENST00000641314 KIF15Q9NS87 1388 aa26.08■■□□□ 1.77
PHGDH-214ENST00000641314 ZNF518AQ6AHZ1 1483 aa26.07■■□□□ 1.76
PHGDH-214ENST00000641314 PLXNC1O60486 1568 aa26.06■■□□□ 1.76
PHGDH-214ENST00000641314 POGZQ7Z3K3 1410 aa26.06■■□□□ 1.76
PHGDH-214ENST00000641314 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
PHGDH-214ENST00000641314 DENND4BO75064 1496 aaPredicted RBP26.05■■□□□ 1.76
PHGDH-214ENST00000641314 ZFYVE16Q7Z3T8 1539 aa26.04■■□□□ 1.76
PHGDH-214ENST00000641314 MYT1LQ9UL68 1186 aa26.03■■□□□ 1.76
PHGDH-214ENST00000641314 RTEL1-TNFRSF6BF6WH68 1400 aa26.02■■□□□ 1.76
PHGDH-214ENST00000641314 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
PHGDH-214ENST00000641314 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
PHGDH-214ENST00000641314 INO80Q9ULG1 1556 aaPredicted RBP26.02■■□□□ 1.76
PHGDH-214ENST00000641314 TRHP20396 242 aaPredicted RBP25.99■■□□□ 1.75
PHGDH-214ENST00000641314 KDM5CP41229 1560 aa25.99■■□□□ 1.75
PHGDH-214ENST00000641314 RAPGEF3O95398 923 aa25.99■■□□□ 1.75
PHGDH-214ENST00000641314 TRIM52Q96A61 297 aa25.99■■□□□ 1.75
PHGDH-214ENST00000641314 RICTORQ6R327 1708 aa25.97■■□□□ 1.75
PHGDH-214ENST00000641314 DUOX2Q9NRD8 1548 aa25.96■■□□□ 1.75
PHGDH-214ENST00000641314 KIDINS220Q9ULH0 1771 aa25.95■■□□□ 1.75
PHGDH-214ENST00000641314 HECW2Q9P2P5 1572 aa25.94■■□□□ 1.74
PHGDH-214ENST00000641314 FRMPD1Q5SYB0 1578 aa25.92■■□□□ 1.74
PHGDH-214ENST00000641314 MLH3Q9UHC1 1453 aa25.91■■□□□ 1.74
PHGDH-214ENST00000641314 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
PHGDH-214ENST00000641314 ERBINQ96RT1 1412 aa25.89■■□□□ 1.73
PHGDH-214ENST00000641314 ZEB1P37275 1124 aaPredicted RBP25.86■■□□□ 1.73
PHGDH-214ENST00000641314 ABCA6Q8N139 1617 aa25.85■■□□□ 1.73
PHGDH-214ENST00000641314 ZMYM4Q5VZL5 1548 aa25.84■■□□□ 1.73
PHGDH-214ENST00000641314 CLSPNQ9HAW4 1339 aa25.83■■□□□ 1.73
PHGDH-214ENST00000641314 COL17A1Q9UMD9 1497 aaPredicted RBP25.82■■□□□ 1.72
PHGDH-214ENST00000641314 MPHOSPH9Q99550 1183 aa25.82■■□□□ 1.72
PHGDH-214ENST00000641314 DHX29Q7Z478 1369 aaKnown RBP25.81■■□□□ 1.72
PHGDH-214ENST00000641314 NUP155O75694 1391 aa25.81■■□□□ 1.72
PHGDH-214ENST00000641314 A2MP01023 1474 aa25.81■■□□□ 1.72
PHGDH-214ENST00000641314 UNC13BO14795 1591 aa25.81■■□□□ 1.72
PHGDH-214ENST00000641314 DIP2CQ9Y2E4 1556 aa25.8■■□□□ 1.72
PHGDH-214ENST00000641314 PZPP20742 1482 aa25.79■■□□□ 1.72
PHGDH-214ENST00000641314 YEATS2Q9ULM3 1422 aa25.79■■□□□ 1.72
PHGDH-214ENST00000641314 SLC4A1APQ9BWU0 796 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms