RNA–Protein interactions for RNA: ENST00000641028.1

CASC19-206, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-206ENST00000641028 RYDENQ9NUL5 291 aaKnown RBP10.53□□□□□ -0.72
CASC19-206ENST00000641028 STK24Q9Y6E0 443 aa10.53□□□□□ -0.72
CASC19-206ENST00000641028 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
CASC19-206ENST00000641028 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
CASC19-206ENST00000641028 ZNF710Q8N1W2 664 aa10.5□□□□□ -0.73
CASC19-206ENST00000641028 GTPBP6O43824 516 aaPredicted RBP10.48□□□□□ -0.73
CASC19-206ENST00000641028 PSEN1P49768 467 aa10.48□□□□□ -0.73
CASC19-206ENST00000641028 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
CASC19-206ENST00000641028 POTEB3A0JP26 581 aa10.46□□□□□ -0.74
CASC19-206ENST00000641028 POTEBQ6S5H4 581 aa10.46□□□□□ -0.74
CASC19-206ENST00000641028 ERBB3P21860 1342 aa10.44□□□□□ -0.74
CASC19-206ENST00000641028 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
CASC19-206ENST00000641028 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
CASC19-206ENST00000641028 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
CASC19-206ENST00000641028 KDM2AQ9Y2K7 1162 aa10.44□□□□□ -0.74
CASC19-206ENST00000641028 BOLA1Q9Y3E2 137 aa10.42□□□□□ -0.74
CASC19-206ENST00000641028 HOXB1P14653 301 aaPredicted RBP10.41□□□□□ -0.74
CASC19-206ENST00000641028 BCANQ96GW7 911 aa10.4□□□□□ -0.75
CASC19-206ENST00000641028 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
CASC19-206ENST00000641028 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
CASC19-206ENST00000641028 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
CASC19-206ENST00000641028 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
CASC19-206ENST00000641028 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
CASC19-206ENST00000641028 PTGER2P43116 358 aa10.33□□□□□ -0.76
CASC19-206ENST00000641028 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
CASC19-206ENST00000641028 NISCHQ9Y2I1 1504 aa10.31□□□□□ -0.76
CASC19-206ENST00000641028 SOX12O15370 315 aa10.31□□□□□ -0.76
CASC19-206ENST00000641028 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
CASC19-206ENST00000641028 NLRP6P59044 892 aa10.28□□□□□ -0.76
CASC19-206ENST00000641028 ZSWIM6Q9HCJ5 1215 aa10.28□□□□□ -0.76
CASC19-206ENST00000641028 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
CASC19-206ENST00000641028 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
CASC19-206ENST00000641028 FBXO22Q8NEZ5 403 aa10.23□□□□□ -0.77
CASC19-206ENST00000641028 PHF8Q9UPP1 1060 aa10.19□□□□□ -0.78
CASC19-206ENST00000641028 ANKRD13DQ6ZTN6 518 aa10.17□□□□□ -0.78
CASC19-206ENST00000641028 NBR1Q14596 966 aa10.16□□□□□ -0.78
CASC19-206ENST00000641028 PPP1R37O75864 691 aa10.15□□□□□ -0.79
CASC19-206ENST00000641028 P3H3Q8IVL6 736 aa10.15□□□□□ -0.79
CASC19-206ENST00000641028 WDR70Q9NW82 654 aa10.15□□□□□ -0.79
CASC19-206ENST00000641028 CADPS2Q86UW7 1296 aa10.14□□□□□ -0.79
CASC19-206ENST00000641028 MICALL2Q8IY33 904 aa10.14□□□□□ -0.79
CASC19-206ENST00000641028 GPR153Q6NV75 609 aa10.13□□□□□ -0.79
CASC19-206ENST00000641028 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
CASC19-206ENST00000641028 LSM11P83369 360 aaKnown RBP eCLIP10.08□□□□□ -0.8
CASC19-206ENST00000641028 ZNF316A6NFI3 1004 aaPredicted RBP10.07□□□□□ -0.8
CASC19-206ENST00000641028 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
CASC19-206ENST00000641028 TMEM92Q6UXU6 159 aa10.06□□□□□ -0.8
CASC19-206ENST00000641028 PBX2P40425 430 aa10.05□□□□□ -0.8
CASC19-206ENST00000641028 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
CASC19-206ENST00000641028 PDE4AP27815 886 aa10.03□□□□□ -0.8
CASC19-206ENST00000641028 HCSTQ9UBK5 93 aa10.02□□□□□ -0.81
CASC19-206ENST00000641028 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
CASC19-206ENST00000641028 NCKAP5LQ9HCH0 1330 aa9.99□□□□□ -0.81
CASC19-206ENST00000641028 MFSD10Q14728 455 aa9.99□□□□□ -0.81
CASC19-206ENST00000641028 E2F4Q16254 413 aa9.99□□□□□ -0.81
CASC19-206ENST00000641028 CRISPLD2Q9H0B8 497 aa9.99□□□□□ -0.81
CASC19-206ENST00000641028 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
CASC19-206ENST00000641028 ARHGEF1Q92888 912 aaKnown RBP9.98□□□□□ -0.81
CASC19-206ENST00000641028 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
CASC19-206ENST00000641028 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
CASC19-206ENST00000641028 PRKCSHP14314 528 aaPredicted RBP9.94□□□□□ -0.82
CASC19-206ENST00000641028 KHSRPQ92945 711 aaKnown RBP eCLIP9.94□□□□□ -0.82
CASC19-206ENST00000641028 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
CASC19-206ENST00000641028 NUDT7P0C024 238 aa9.9□□□□□ -0.82
CASC19-206ENST00000641028 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
CASC19-206ENST00000641028 TULP1O00294 542 aaPredicted RBP9.89□□□□□ -0.83
CASC19-206ENST00000641028 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
CASC19-206ENST00000641028 PSDA5PKW4 1024 aaPredicted RBP9.88□□□□□ -0.83
CASC19-206ENST00000641028 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
CASC19-206ENST00000641028 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
CASC19-206ENST00000641028 PPP1R15BQ5SWA1 713 aa9.86□□□□□ -0.83
CASC19-206ENST00000641028 ADGRD1Q6QNK2 874 aa9.86□□□□□ -0.83
CASC19-206ENST00000641028 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CASC19-206ENST00000641028 STAC3Q96MF2 364 aa9.86□□□□□ -0.83
CASC19-206ENST00000641028 ARHGAP33O14559 1287 aa9.84□□□□□ -0.83
CASC19-206ENST00000641028 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
CASC19-206ENST00000641028 FOXK1P85037 733 aa9.82□□□□□ -0.84
CASC19-206ENST00000641028 C2orf72A6NCS6 295 aa9.82□□□□□ -0.84
CASC19-206ENST00000641028 SLC34A2O95436 690 aa9.82□□□□□ -0.84
CASC19-206ENST00000641028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.81□□□□□ -0.84
CASC19-206ENST00000641028 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
CASC19-206ENST00000641028 TK2O00142 265 aa9.8□□□□□ -0.84
CASC19-206ENST00000641028 DSG2Q14126 1118 aa9.8□□□□□ -0.84
CASC19-206ENST00000641028 KIF3CO14782 793 aa9.79□□□□□ -0.84
CASC19-206ENST00000641028 SMYD5Q6GMV2 418 aa9.79□□□□□ -0.84
CASC19-206ENST00000641028 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
CASC19-206ENST00000641028 SEMA3EO15041 775 aa9.78□□□□□ -0.84
CASC19-206ENST00000641028 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
CASC19-206ENST00000641028 KCNH8Q96L42 1107 aa9.78□□□□□ -0.84
CASC19-206ENST00000641028 RGS20O76081 388 aa9.75□□□□□ -0.85
CASC19-206ENST00000641028 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
CASC19-206ENST00000641028 KCTD12Q96CX2 325 aaKnown RBP9.75□□□□□ -0.85
CASC19-206ENST00000641028 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
CASC19-206ENST00000641028 IRX2Q9BZI1 471 aaPredicted RBP9.73□□□□□ -0.85
CASC19-206ENST00000641028 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
CASC19-206ENST00000641028 PDIA6Q15084 440 aa9.71□□□□□ -0.86
CASC19-206ENST00000641028 PPP4R3BQ5MIZ7 849 aa9.71□□□□□ -0.86
CASC19-206ENST00000641028 DPYSL4O14531 572 aa9.7□□□□□ -0.86
CASC19-206ENST00000641028 HRO43593 1189 aa9.7□□□□□ -0.86
CASC19-206ENST00000641028 PSEN2P49810 448 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms