RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.59□□□□□ -0.71
TRPS1-212ENST00000640765 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
TRPS1-212ENST00000640765 TPM1P09493 284 aa10.59□□□□□ -0.71
TRPS1-212ENST00000640765 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
TRPS1-212ENST00000640765 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
TRPS1-212ENST00000640765 HSP90B2PQ58FF3 399 aa10.57□□□□□ -0.72
TRPS1-212ENST00000640765 TAF3Q5VWG9 929 aa10.57□□□□□ -0.72
TRPS1-212ENST00000640765 PDE4CQ08493 712 aa10.57□□□□□ -0.72
TRPS1-212ENST00000640765 FAM13BQ9NYF5 915 aa10.56□□□□□ -0.72
TRPS1-212ENST00000640765 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
TRPS1-212ENST00000640765 KIF16BQ96L93 1317 aa10.56□□□□□ -0.72
TRPS1-212ENST00000640765 GOLGA6L19H0YKK7 550 aa10.56□□□□□ -0.72
TRPS1-212ENST00000640765 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
TRPS1-212ENST00000640765 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
TRPS1-212ENST00000640765 TIMELESSQ9UNS1 1208 aa10.55□□□□□ -0.72
TRPS1-212ENST00000640765 KNSTRNQ9Y448 316 aa10.55□□□□□ -0.72
TRPS1-212ENST00000640765 NPHP1O15259 732 aa10.54□□□□□ -0.72
TRPS1-212ENST00000640765 TPM2P07951 284 aa10.54□□□□□ -0.72
TRPS1-212ENST00000640765 B4GALNT3Q6L9W6 998 aa10.54□□□□□ -0.72
TRPS1-212ENST00000640765 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
TRPS1-212ENST00000640765 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
TRPS1-212ENST00000640765 FRAT1Q92837 279 aaPredicted RBP10.54□□□□□ -0.72
TRPS1-212ENST00000640765 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
TRPS1-212ENST00000640765 HSP90AB3PQ58FF7 597 aa10.53□□□□□ -0.72
TRPS1-212ENST00000640765 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRPS1-212ENST00000640765 ZRSR2Q15696 482 aaKnown RBP10.53□□□□□ -0.72
TRPS1-212ENST00000640765 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
TRPS1-212ENST00000640765 NACADO15069 1562 aa10.52□□□□□ -0.73
TRPS1-212ENST00000640765 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
TRPS1-212ENST00000640765 GSE1Q14687 1217 aa10.52□□□□□ -0.73
TRPS1-212ENST00000640765 USP8P40818 1118 aa10.51□□□□□ -0.73
TRPS1-212ENST00000640765 KIF3AQ9Y496 699 aa10.51□□□□□ -0.73
TRPS1-212ENST00000640765 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
TRPS1-212ENST00000640765 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
TRPS1-212ENST00000640765 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
TRPS1-212ENST00000640765 CREBRFQ8IUR6 639 aa10.51□□□□□ -0.73
TRPS1-212ENST00000640765 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
TRPS1-212ENST00000640765 RASSF8Q8NHQ8 419 aa10.5□□□□□ -0.73
TRPS1-212ENST00000640765 CAGE1Q8TC20 777 aa10.5□□□□□ -0.73
TRPS1-212ENST00000640765 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
TRPS1-212ENST00000640765 FBLN2P98095 1184 aa10.5□□□□□ -0.73
TRPS1-212ENST00000640765 DEF6Q9H4E7 631 aa10.5□□□□□ -0.73
TRPS1-212ENST00000640765 ZNF592Q92610 1267 aa10.49□□□□□ -0.73
TRPS1-212ENST00000640765 PLCD4Q9BRC7 762 aa10.49□□□□□ -0.73
TRPS1-212ENST00000640765 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
TRPS1-212ENST00000640765 ATP6V1DQ9Y5K8 247 aa10.49□□□□□ -0.73
TRPS1-212ENST00000640765 PES1O00541 588 aaKnown RBP10.49□□□□□ -0.73
TRPS1-212ENST00000640765 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 MYO6Q9UM54 1294 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 NUDCQ9Y266 331 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-212ENST00000640765 FAM43AQ8N2R8 423 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-212ENST00000640765 ARID3CA6NKF2 412 aa10.48□□□□□ -0.73
TRPS1-212ENST00000640765 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
TRPS1-212ENST00000640765 ST18O60284 1047 aa10.47□□□□□ -0.73
TRPS1-212ENST00000640765 HOMER1Q86YM7 354 aa10.47□□□□□ -0.73
TRPS1-212ENST00000640765 BECN2A8MW95 431 aa10.47□□□□□ -0.73
TRPS1-212ENST00000640765 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
TRPS1-212ENST00000640765 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
TRPS1-212ENST00000640765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRPS1-212ENST00000640765 ANKRD20A12PQ8NF67 263 aa10.45□□□□□ -0.74
TRPS1-212ENST00000640765 HIRIP3Q9BW71 556 aaPredicted RBP10.45□□□□□ -0.74
TRPS1-212ENST00000640765 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
TRPS1-212ENST00000640765 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
TRPS1-212ENST00000640765 CHMP4CQ96CF2 233 aa10.44□□□□□ -0.74
TRPS1-212ENST00000640765 IPO8O15397 1037 aaKnown RBP10.43□□□□□ -0.74
TRPS1-212ENST00000640765 HOOK1Q9UJC3 728 aaKnown RBP10.42□□□□□ -0.74
TRPS1-212ENST00000640765 CCDC173Q0VFZ6 552 aa10.42□□□□□ -0.74
TRPS1-212ENST00000640765 SF3A1Q15459 793 aaKnown RBP10.42□□□□□ -0.74
TRPS1-212ENST00000640765 MNS1Q8NEH6 495 aa10.42□□□□□ -0.74
TRPS1-212ENST00000640765 RB1CC1Q8TDY2 1594 aa10.42□□□□□ -0.74
TRPS1-212ENST00000640765 TSPYL1Q9H0U9 437 aa10.42□□□□□ -0.74
TRPS1-212ENST00000640765 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
TRPS1-212ENST00000640765 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-212ENST00000640765 CLASRPQ8N2M8 674 aaKnown RBP10.41□□□□□ -0.74
TRPS1-212ENST00000640765 GIMAP7Q8NHV1 300 aa10.4□□□□□ -0.74
TRPS1-212ENST00000640765 EEA1Q15075 1411 aa10.4□□□□□ -0.74
TRPS1-212ENST00000640765 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
TRPS1-212ENST00000640765 PMFBP1Q8TBY8 1022 aa10.4□□□□□ -0.74
TRPS1-212ENST00000640765 DDX49Q9Y6V7 483 aaKnown RBP10.4□□□□□ -0.74
TRPS1-212ENST00000640765 H3BQV1 296 aa10.39□□□□□ -0.75
TRPS1-212ENST00000640765 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
TRPS1-212ENST00000640765 GOLGA6L10A6NI86 522 aa10.38□□□□□ -0.75
TRPS1-212ENST00000640765 PLPPR3Q6T4P5 718 aa10.38□□□□□ -0.75
TRPS1-212ENST00000640765 PRKCSHP14314 528 aaPredicted RBP10.38□□□□□ -0.75
TRPS1-212ENST00000640765 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
TRPS1-212ENST00000640765 IFT57Q9NWB7 429 aa10.37□□□□□ -0.75
TRPS1-212ENST00000640765 CHIC2Q9UKJ5 165 aa10.37□□□□□ -0.75
TRPS1-212ENST00000640765 RRP9O43818 475 aaKnown RBP10.37□□□□□ -0.75
TRPS1-212ENST00000640765 ODF2Q5BJF6 829 aa10.37□□□□□ -0.75
TRPS1-212ENST00000640765 MFAP1P55081 439 aaKnown RBP10.36□□□□□ -0.75
TRPS1-212ENST00000640765 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
TRPS1-212ENST00000640765 CCP110O43303 1012 aa10.35□□□□□ -0.75
TRPS1-212ENST00000640765 ANKRD18AQ8IVF6 992 aa10.35□□□□□ -0.75
TRPS1-212ENST00000640765 RALBP1Q15311 655 aa10.35□□□□□ -0.75
TRPS1-212ENST00000640765 CCDC39Q9UFE4 941 aa10.35□□□□□ -0.75
TRPS1-212ENST00000640765 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
TRPS1-212ENST00000640765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■■ 160.6
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms