RNA–Protein interactions for RNA: ENST00000640726.1

SLC35A3-223, Transcript of solute carrier family 35 member A3, human

TSL 5

Gene SLC35A3, Length 1,636 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC35A3-223	ENST00000640726	TSPOAP1	O95153	1857 aa		33.15	■■■□□ 2.9
SLC35A3-223	ENST00000640726	ARHGAP5	Q13017	1502 aa		33.14	■■■□□ 2.9
SLC35A3-223	ENST00000640726	MIA2	Q96PC5	1412 aa		33.12	■■■□□ 2.89
SLC35A3-223	ENST00000640726	EFCAB2	Q5VUJ9	269 aa		33.12	■■■□□ 2.89
SLC35A3-223	ENST00000640726	FGD6	Q6ZV73	1430 aa		33.09	■■■□□ 2.89
SLC35A3-223	ENST00000640726	FANCA	O15360	1455 aa		33.09	■■■□□ 2.89
SLC35A3-223	ENST00000640726	PPRC1	Q5VV67	1664 aa	Known RBP	33.09	■■■□□ 2.89
SLC35A3-223	ENST00000640726	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.06	■■■□□ 2.88
SLC35A3-223	ENST00000640726	TEX14	Q8IWB6	1497 aa		33.06	■■■□□ 2.88
SLC35A3-223	ENST00000640726	CFAP74	Q9C0B2	1584 aa		33.03	■■■□□ 2.88
SLC35A3-223	ENST00000640726	NEO1	Q92859	1461 aa		33.02	■■■□□ 2.88
SLC35A3-223	ENST00000640726	PTPN23	Q9H3S7	1636 aa		33	■■■□□ 2.87
SLC35A3-223	ENST00000640726	RRBP1	Q9P2E9	1410 aa	Known RBP	33	■■■□□ 2.87
SLC35A3-223	ENST00000640726	ZNF644	Q9H582	1327 aa	Predicted RBP	33	■■■□□ 2.87
SLC35A3-223	ENST00000640726	SAMD9L	Q8IVG5	1584 aa		32.99	■■■□□ 2.87
SLC35A3-223	ENST00000640726	AKNA	Q7Z591	1439 aa		32.99	■■■□□ 2.87
SLC35A3-223	ENST00000640726	CAMSAP2	Q08AD1	1489 aa		32.97	■■■□□ 2.87
SLC35A3-223	ENST00000640726	TCOF1	Q13428	1488 aa	Known RBP	32.97	■■■□□ 2.87
SLC35A3-223	ENST00000640726	PLEKHH2	Q8IVE3	1493 aa		32.96	■■■□□ 2.87
SLC35A3-223	ENST00000640726	FAM50A	Q14320	339 aa	Known RBP	32.94	■■■□□ 2.86
SLC35A3-223	ENST00000640726	ADGRL1	O94910	1474 aa		32.93	■■■□□ 2.86
SLC35A3-223	ENST00000640726	KIAA1107	Q9UPP5	1409 aa		32.92	■■■□□ 2.86
SLC35A3-223	ENST00000640726	ABCC1	P33527	1531 aa		32.91	■■■□□ 2.86
SLC35A3-223	ENST00000640726	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
SLC35A3-223	ENST00000640726	SCAPER	Q9BY12	1400 aa		32.88	■■■□□ 2.85
SLC35A3-223	ENST00000640726	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.88	■■■□□ 2.85	1e-6	■■■■□ 22.8
SLC35A3-223	ENST00000640726	SYCP2	Q9BX26	1530 aa		32.87	■■■□□ 2.85
SLC35A3-223	ENST00000640726	ARHGEF12	Q9NZN5	1544 aa		32.86	■■■□□ 2.85
SLC35A3-223	ENST00000640726	MBD5	Q9P267	1494 aa		32.84	■■■□□ 2.85
SLC35A3-223	ENST00000640726	RSPH4A	Q5TD94	716 aa		32.83	■■■□□ 2.85
SLC35A3-223	ENST00000640726	ARHGEF5	Q12774	1597 aa		32.81	■■■□□ 2.84
SLC35A3-223	ENST00000640726	DENND4B	O75064	1496 aa	Predicted RBP	32.8	■■■□□ 2.84
SLC35A3-223	ENST00000640726	TRAPPC8	Q9Y2L5	1435 aa		32.78	■■■□□ 2.84
SLC35A3-223	ENST00000640726	DNMT1	P26358	1616 aa	Known RBP	32.76	■■■□□ 2.84
SLC35A3-223	ENST00000640726	CCDC141	Q6ZP82	1450 aa		32.76	■■■□□ 2.83
SLC35A3-223	ENST00000640726	POGZ	Q7Z3K3	1410 aa		32.76	■■■□□ 2.83
SLC35A3-223	ENST00000640726	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.75	■■■□□ 2.83
SLC35A3-223	ENST00000640726	TRIM26	Q12899	539 aa	Predicted RBP	32.75	■■■□□ 2.83
SLC35A3-223	ENST00000640726	AFAP1	Q8N556	730 aa		32.75	■■■□□ 2.83
SLC35A3-223	ENST00000640726	ZNF518A	Q6AHZ1	1483 aa		32.74	■■■□□ 2.83
SLC35A3-223	ENST00000640726	ABCC5	O15440	1437 aa		32.74	■■■□□ 2.83
SLC35A3-223	ENST00000640726	RAPGEF3	O95398	923 aa		32.74	■■■□□ 2.83
SLC35A3-223	ENST00000640726	DAPK1	P53355	1430 aa		32.74	■■■□□ 2.83
SLC35A3-223	ENST00000640726	RICTOR	Q6R327	1708 aa		32.72	■■■□□ 2.83
SLC35A3-223	ENST00000640726	TSPY4	P0CV99	314 aa		32.71	■■■□□ 2.83
SLC35A3-223	ENST00000640726	TSPY10	P0CW01	314 aa		32.71	■■■□□ 2.83
SLC35A3-223	ENST00000640726	ITGAE	P38570	1179 aa		32.7	■■■□□ 2.83
SLC35A3-223	ENST00000640726	KDM6B	O15054	1643 aa		32.69	■■■□□ 2.82
SLC35A3-223	ENST00000640726	CROCC2	H7BZ55	1655 aa		32.67	■■■□□ 2.82
SLC35A3-223	ENST00000640726	KDM5C	P41229	1560 aa		32.67	■■■□□ 2.82
SLC35A3-223	ENST00000640726	FRMPD1	Q5SYB0	1578 aa		32.67	■■■□□ 2.82
SLC35A3-223	ENST00000640726	SPAG9	O60271	1321 aa	Known RBP	32.65	■■■□□ 2.82
SLC35A3-223	ENST00000640726	PTPRK	Q15262	1439 aa		32.64	■■■□□ 2.82
SLC35A3-223	ENST00000640726	SHANK2	Q9UPX8	1470 aa		32.64	■■■□□ 2.82
SLC35A3-223	ENST00000640726	C9orf84	Q5VXU9	1444 aa		32.62	■■■□□ 2.81
SLC35A3-223	ENST00000640726	MAST1	Q9Y2H9	1570 aa		32.6	■■■□□ 2.81
SLC35A3-223	ENST00000640726	CHIC2	Q9UKJ5	165 aa		32.6	■■■□□ 2.81
SLC35A3-223	ENST00000640726	ZMYM4	Q5VZL5	1548 aa		32.6	■■■□□ 2.81
SLC35A3-223	ENST00000640726	MLH3	Q9UHC1	1453 aa		32.6	■■■□□ 2.81
SLC35A3-223	ENST00000640726	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.6	■■■□□ 2.81
SLC35A3-223	ENST00000640726	MYT1L	Q9UL68	1186 aa		32.58	■■■□□ 2.81
SLC35A3-223	ENST00000640726	HECW2	Q9P2P5	1572 aa		32.57	■■■□□ 2.8
SLC35A3-223	ENST00000640726	INO80	Q9ULG1	1556 aa	Predicted RBP	32.56	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ATP7A	Q04656	1500 aa		32.55	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ZFYVE16	Q7Z3T8	1539 aa		32.55	■■■□□ 2.8
SLC35A3-223	ENST00000640726	MAGI2	Q86UL8	1455 aa		32.55	■■■□□ 2.8
SLC35A3-223	ENST00000640726	KIDINS220	Q9ULH0	1771 aa		32.54	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ADGB	Q8N7X0	1667 aa		32.53	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ANKRD30A	Q9BXX3	1397 aa		32.52	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ADGRL2	O95490	1459 aa		32.52	■■■□□ 2.8
SLC35A3-223	ENST00000640726	ROCK1	Q13464	1354 aa		32.51	■■■□□ 2.8
SLC35A3-223	ENST00000640726	NCOA1	Q15788	1441 aa		32.5	■■■□□ 2.79
SLC35A3-223	ENST00000640726	PLXNC1	O60486	1568 aa		32.47	■■■□□ 2.79
SLC35A3-223	ENST00000640726	YEATS2	Q9ULM3	1422 aa		32.45	■■■□□ 2.79
SLC35A3-223	ENST00000640726	RRP7BP	Q9NSQ0	103 aa		32.45	■■■□□ 2.79
SLC35A3-223	ENST00000640726	ABCA6	Q8N139	1617 aa		32.42	■■■□□ 2.78
SLC35A3-223	ENST00000640726	PCGF6	Q9BYE7	350 aa		32.42	■■■□□ 2.78
SLC35A3-223	ENST00000640726	KIF15	Q9NS87	1388 aa		32.42	■■■□□ 2.78
SLC35A3-223	ENST00000640726	DIP2C	Q9Y2E4	1556 aa		32.41	■■■□□ 2.78
SLC35A3-223	ENST00000640726	ARHGEF40	Q8TER5	1519 aa		32.39	■■■□□ 2.78
SLC35A3-223	ENST00000640726	HFM1	A2PYH4	1435 aa		32.38	■■■□□ 2.77
SLC35A3-223	ENST00000640726	ATP10A	O60312	1499 aa		32.37	■■■□□ 2.77
SLC35A3-223	ENST00000640726	DUOX2	Q9NRD8	1548 aa		32.36	■■■□□ 2.77
SLC35A3-223	ENST00000640726	NAIP	Q13075	1403 aa		32.36	■■■□□ 2.77
SLC35A3-223	ENST00000640726	DHX29	Q7Z478	1369 aa	Known RBP	32.34	■■■□□ 2.77
SLC35A3-223	ENST00000640726	A2M	P01023	1474 aa		32.34	■■■□□ 2.77
SLC35A3-223	ENST00000640726	GCC2	Q8IWJ2	1684 aa		32.32	■■■□□ 2.76
SLC35A3-223	ENST00000640726	ANKRD50	Q9ULJ7	1429 aa		32.31	■■■□□ 2.76
SLC35A3-223	ENST00000640726	RERE	Q9P2R6	1566 aa		32.29	■■■□□ 2.76
SLC35A3-223	ENST00000640726	ERBIN	Q96RT1	1412 aa		32.28	■■■□□ 2.76
SLC35A3-223	ENST00000640726	SETD5	Q9C0A6	1442 aa		32.28	■■■□□ 2.76
SLC35A3-223	ENST00000640726	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.2	■■■□□ 2.75
SLC35A3-223	ENST00000640726	AGL	P35573	1532 aa		32.19	■■■□□ 2.74
SLC35A3-223	ENST00000640726	KIF3B	O15066	747 aa		32.18	■■■□□ 2.74
SLC35A3-223	ENST00000640726	RAB3GAP2	Q9H2M9	1393 aa		32.18	■■■□□ 2.74
SLC35A3-223	ENST00000640726	SIGLEC1	Q9BZZ2	1709 aa		32.17	■■■□□ 2.74
SLC35A3-223	ENST00000640726	BCORL1	Q5H9F3	1711 aa		32.16	■■■□□ 2.74
SLC35A3-223	ENST00000640726	HRC	P23327	699 aa		32.14	■■■□□ 2.74
SLC35A3-223	ENST00000640726	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.13	■■■□□ 2.73
SLC35A3-223	ENST00000640726	ACIN1	Q9UKV3	1341 aa	Known RBP	32.1	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms