RNA–Protein interactions for RNA: ENST00000640714.1

CNTN2-233, Transcript of contactin 2, human

TSL 2

Gene CNTN2, Length 633 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-233	ENST00000640714	POGZ	Q7Z3K3	1410 aa		11.63	□□□□□ -0.55
CNTN2-233	ENST00000640714	ARHGEF40	Q8TER5	1519 aa		11.63	□□□□□ -0.55
CNTN2-233	ENST00000640714	ZMYM4	Q5VZL5	1548 aa		11.62	□□□□□ -0.55
CNTN2-233	ENST00000640714	YEATS2	Q9ULM3	1422 aa		11.61	□□□□□ -0.55
CNTN2-233	ENST00000640714	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.6	□□□□□ -0.55
CNTN2-233	ENST00000640714	ZFYVE16	Q7Z3T8	1539 aa		11.6	□□□□□ -0.55
CNTN2-233	ENST00000640714	CDC42BPB	Q9Y5S2	1711 aa		11.6	□□□□□ -0.55
CNTN2-233	ENST00000640714	PREX2	Q70Z35	1606 aa		11.6	□□□□□ -0.55
CNTN2-233	ENST00000640714	MAGI2	Q86UL8	1455 aa		11.59	□□□□□ -0.55
CNTN2-233	ENST00000640714	MTUS2	Q5JR59	1369 aa		11.58	□□□□□ -0.56
CNTN2-233	ENST00000640714	CDC42BPA	Q5VT25	1732 aa		11.57	□□□□□ -0.56
CNTN2-233	ENST00000640714	ADAMTSL3	P82987	1691 aa		11.57	□□□□□ -0.56
CNTN2-233	ENST00000640714	AFAP1	Q8N556	730 aa		11.57	□□□□□ -0.56
CNTN2-233	ENST00000640714	BCORL1	Q5H9F3	1711 aa		11.57	□□□□□ -0.56
CNTN2-233	ENST00000640714	ZNF518A	Q6AHZ1	1483 aa		11.57	□□□□□ -0.56
CNTN2-233	ENST00000640714	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.56	□□□□□ -0.56
CNTN2-233	ENST00000640714	SIGLEC1	Q9BZZ2	1709 aa		11.56	□□□□□ -0.56
CNTN2-233	ENST00000640714	ABCC1	P33527	1531 aa		11.55	□□□□□ -0.56
CNTN2-233	ENST00000640714	ARHGEF12	Q9NZN5	1544 aa		11.55	□□□□□ -0.56
CNTN2-233	ENST00000640714	KDM5C	P41229	1560 aa		11.55	□□□□□ -0.56
CNTN2-233	ENST00000640714	TRAPPC8	Q9Y2L5	1435 aa		11.55	□□□□□ -0.56
CNTN2-233	ENST00000640714	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.55	□□□□□ -0.56
CNTN2-233	ENST00000640714	MADD	Q8WXG6	1647 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	MYT1L	Q9UL68	1186 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	ATP10A	O60312	1499 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	PTPRM	P28827	1452 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	EHBP1L1	Q8N3D4	1523 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	CCNB3	Q8WWL7	1395 aa		11.54	□□□□□ -0.56
CNTN2-233	ENST00000640714	VPS8	Q8N3P4	1428 aa		11.53	□□□□□ -0.56
CNTN2-233	ENST00000640714	ITSN2	Q9NZM3	1697 aa		11.53	□□□□□ -0.56
CNTN2-233	ENST00000640714	SAMD9L	Q8IVG5	1584 aa		11.53	□□□□□ -0.56
CNTN2-233	ENST00000640714	C9orf84	Q5VXU9	1444 aa		11.52	□□□□□ -0.56
CNTN2-233	ENST00000640714	MLEC	Q14165	292 aa		11.52	□□□□□ -0.57
CNTN2-233	ENST00000640714	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.52	□□□□□ -0.57
CNTN2-233	ENST00000640714	HECW2	Q9P2P5	1572 aa		11.52	□□□□□ -0.57
CNTN2-233	ENST00000640714	TIAM1	Q13009	1591 aa		11.51	□□□□□ -0.57
CNTN2-233	ENST00000640714	RIMS1	Q86UR5	1692 aa	Known RBP	11.51	□□□□□ -0.57
CNTN2-233	ENST00000640714	MLH3	Q9UHC1	1453 aa		11.51	□□□□□ -0.57
CNTN2-233	ENST00000640714	SYCP2	Q9BX26	1530 aa		11.5	□□□□□ -0.57
CNTN2-233	ENST00000640714	DIP2C	Q9Y2E4	1556 aa		11.5	□□□□□ -0.57
CNTN2-233	ENST00000640714	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CNTN2-233	ENST00000640714	ABCA6	Q8N139	1617 aa		11.49	□□□□□ -0.57
CNTN2-233	ENST00000640714	ZNF644	Q9H582	1327 aa	Predicted RBP	11.48	□□□□□ -0.57
CNTN2-233	ENST00000640714	NCOA2	Q15596	1464 aa		11.48	□□□□□ -0.57
CNTN2-233	ENST00000640714	PLEKHH2	Q8IVE3	1493 aa		11.48	□□□□□ -0.57
CNTN2-233	ENST00000640714	KIDINS220	Q9ULH0	1771 aa		11.47	□□□□□ -0.57
CNTN2-233	ENST00000640714	KIAA1107	Q9UPP5	1409 aa		11.47	□□□□□ -0.57
CNTN2-233	ENST00000640714	SPAG9	O60271	1321 aa	Known RBP	11.47	□□□□□ -0.57
CNTN2-233	ENST00000640714	PLPPR3	Q6T4P5	718 aa		11.47	□□□□□ -0.57
CNTN2-233	ENST00000640714	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.46	□□□□□ -0.57
CNTN2-233	ENST00000640714	RERE	Q9P2R6	1566 aa		11.46	□□□□□ -0.57
CNTN2-233	ENST00000640714	FER1L4	A9Z1Z3	1794 aa		11.46	□□□□□ -0.58
CNTN2-233	ENST00000640714	LRRC9	Q6ZRR7	1453 aa		11.45	□□□□□ -0.58
CNTN2-233	ENST00000640714	KANK4	Q5T7N3	995 aa	Predicted RBP	11.44	□□□□□ -0.58
CNTN2-233	ENST00000640714	AGL	P35573	1532 aa		11.43	□□□□□ -0.58
CNTN2-233	ENST00000640714	ATP7A	Q04656	1500 aa		11.43	□□□□□ -0.58
CNTN2-233	ENST00000640714	MAP3K1	Q13233	1512 aa		11.43	□□□□□ -0.58
CNTN2-233	ENST00000640714	MBD5	Q9P267	1494 aa		11.43	□□□□□ -0.58
CNTN2-233	ENST00000640714	INO80	Q9ULG1	1556 aa	Predicted RBP	11.42	□□□□□ -0.58
CNTN2-233	ENST00000640714	CAMSAP2	Q08AD1	1489 aa		11.42	□□□□□ -0.58
CNTN2-233	ENST00000640714	LMTK3	Q96Q04	1460 aa		11.41	□□□□□ -0.58
CNTN2-233	ENST00000640714	CEBPA	P49715	358 aa	Predicted RBP	11.41	□□□□□ -0.58
CNTN2-233	ENST00000640714	A2M	P01023	1474 aa		11.39	□□□□□ -0.59
CNTN2-233	ENST00000640714	CCDC141	Q6ZP82	1450 aa		11.38	□□□□□ -0.59
CNTN2-233	ENST00000640714	PLXNC1	O60486	1568 aa		11.37	□□□□□ -0.59
CNTN2-233	ENST00000640714	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.37	□□□□□ -0.59
CNTN2-233	ENST00000640714	HSPA2	P54652	639 aa		11.37	□□□□□ -0.59
CNTN2-233	ENST00000640714	APLP2	Q06481	763 aa		11.37	□□□□□ -0.59
CNTN2-233	ENST00000640714	ESF1	Q9H501	851 aa	Known RBP	11.37	□□□□□ -0.59
CNTN2-233	ENST00000640714	MYOM3	Q5VTT5	1437 aa		11.36	□□□□□ -0.59
CNTN2-233	ENST00000640714	ADGB	Q8N7X0	1667 aa		11.36	□□□□□ -0.59
CNTN2-233	ENST00000640714	RSPH4A	Q5TD94	716 aa		11.35	□□□□□ -0.59
CNTN2-233	ENST00000640714	ARHGEF5	Q12774	1597 aa		11.35	□□□□□ -0.59
CNTN2-233	ENST00000640714	CNTLN	Q9NXG0	1405 aa		11.35	□□□□□ -0.59
CNTN2-233	ENST00000640714	C3	P01024	1663 aa		11.34	□□□□□ -0.59
CNTN2-233	ENST00000640714	DHX29	Q7Z478	1369 aa	Known RBP	11.34	□□□□□ -0.59
CNTN2-233	ENST00000640714	GGT6	Q6P531	493 aa		11.34	□□□□□ -0.59
CNTN2-233	ENST00000640714	MIA2	Q96PC5	1412 aa		11.34	□□□□□ -0.59
CNTN2-233	ENST00000640714	PREX1	Q8TCU6	1659 aa		11.33	□□□□□ -0.6
CNTN2-233	ENST00000640714	SETD1B	Q9UPS6	1966 aa	Known RBP	11.32	□□□□□ -0.6
CNTN2-233	ENST00000640714	TSPY4	P0CV99	314 aa		11.32	□□□□□ -0.6
CNTN2-233	ENST00000640714	TSPY10	P0CW01	314 aa		11.32	□□□□□ -0.6
CNTN2-233	ENST00000640714	CLTC	Q00610	1675 aa	Known RBP	11.31	□□□□□ -0.6
CNTN2-233	ENST00000640714	UHRF1BP1	Q6BDS2	1440 aa		11.31	□□□□□ -0.6
CNTN2-233	ENST00000640714	MROH2A	A6NES4	1674 aa		11.3	□□□□□ -0.6
CNTN2-233	ENST00000640714	ZMYM3	Q14202	1370 aa		11.3	□□□□□ -0.6
CNTN2-233	ENST00000640714	KIF3B	O15066	747 aa		11.3	□□□□□ -0.6
CNTN2-233	ENST00000640714	MAST1	Q9Y2H9	1570 aa		11.29	□□□□□ -0.6
CNTN2-233	ENST00000640714	PTPN23	Q9H3S7	1636 aa		11.28	□□□□□ -0.6
CNTN2-233	ENST00000640714	FGD6	Q6ZV73	1430 aa		11.28	□□□□□ -0.6
CNTN2-233	ENST00000640714	PPP6R1	Q9UPN7	881 aa		11.28	□□□□□ -0.6
CNTN2-233	ENST00000640714	NPAT	Q14207	1427 aa		11.27	□□□□□ -0.6
CNTN2-233	ENST00000640714	ABCC5	O15440	1437 aa		11.26	□□□□□ -0.61
CNTN2-233	ENST00000640714	TCOF1	Q13428	1488 aa	Known RBP	11.26	□□□□□ -0.61
CNTN2-233	ENST00000640714	ILDR1	Q86SU0	546 aa	Predicted RBP	11.26	□□□□□ -0.61
CNTN2-233	ENST00000640714	PTPRK	Q15262	1439 aa		11.26	□□□□□ -0.61
CNTN2-233	ENST00000640714	DAPK1	P53355	1430 aa		11.25	□□□□□ -0.61
CNTN2-233	ENST00000640714	SHANK2	Q9UPX8	1470 aa		11.25	□□□□□ -0.61
CNTN2-233	ENST00000640714	KDM5D	Q9BY66	1539 aa		11.25	□□□□□ -0.61
CNTN2-233	ENST00000640714	CROCC2	H7BZ55	1655 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms