RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
AP3S1-209ENST00000640413 NLRP6P59044 892 aa12.69□□□□□ -0.38
AP3S1-209ENST00000640413 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
AP3S1-209ENST00000640413 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
AP3S1-209ENST00000640413 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
AP3S1-209ENST00000640413 STK25O00506 426 aa12.65□□□□□ -0.38
AP3S1-209ENST00000640413 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
AP3S1-209ENST00000640413 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
AP3S1-209ENST00000640413 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
AP3S1-209ENST00000640413 ZSWIM6Q9HCJ5 1215 aa12.61□□□□□ -0.39
AP3S1-209ENST00000640413 RGL2O15211 777 aa12.6□□□□□ -0.39
AP3S1-209ENST00000640413 PKD2Q13563 968 aa12.6□□□□□ -0.39
AP3S1-209ENST00000640413 ARSIQ5FYB1 569 aa12.58□□□□□ -0.4
AP3S1-209ENST00000640413 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
AP3S1-209ENST00000640413 ZNF687Q8N1G0 1237 aa12.53□□□□□ -0.4
AP3S1-209ENST00000640413 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
AP3S1-209ENST00000640413 KIF3CO14782 793 aa12.5□□□□□ -0.41
AP3S1-209ENST00000640413 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.41
AP3S1-209ENST00000640413 PPP1R37O75864 691 aa12.45□□□□□ -0.42
AP3S1-209ENST00000640413 RNF166Q96A37 237 aaPredicted RBP12.43□□□□□ -0.42
AP3S1-209ENST00000640413 NUDT7P0C024 238 aa12.42□□□□□ -0.42
AP3S1-209ENST00000640413 MYT1LQ9UL68 1186 aa12.41□□□□□ -0.42
AP3S1-209ENST00000640413 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
AP3S1-209ENST00000640413 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
AP3S1-209ENST00000640413 PCDHGA4Q9Y5G9 962 aa12.37□□□□□ -0.43
AP3S1-209ENST00000640413 SLC34A2O95436 690 aa12.35□□□□□ -0.43
AP3S1-209ENST00000640413 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
AP3S1-209ENST00000640413 LSM11P83369 360 aaKnown RBP eCLIP12.32□□□□□ -0.44
AP3S1-209ENST00000640413 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
AP3S1-209ENST00000640413 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
AP3S1-209ENST00000640413 PTGER2P43116 358 aa12.28□□□□□ -0.44
AP3S1-209ENST00000640413 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
AP3S1-209ENST00000640413 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
AP3S1-209ENST00000640413 PBX2P40425 430 aa12.25□□□□□ -0.45
AP3S1-209ENST00000640413 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
AP3S1-209ENST00000640413 FOXK1P85037 733 aa12.21□□□□□ -0.45
AP3S1-209ENST00000640413 PTCD2Q8WV60 388 aaKnown RBP12.21□□□□□ -0.45
AP3S1-209ENST00000640413 KDM4FA0A1W2PPD8 638 aa12.2□□□□□ -0.46
AP3S1-209ENST00000640413 DSG2Q14126 1118 aa12.2□□□□□ -0.46
AP3S1-209ENST00000640413 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
AP3S1-209ENST00000640413 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
AP3S1-209ENST00000640413 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
AP3S1-209ENST00000640413 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
AP3S1-209ENST00000640413 PSEN2P49810 448 aa12.12□□□□□ -0.47
AP3S1-209ENST00000640413 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
AP3S1-209ENST00000640413 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
AP3S1-209ENST00000640413 TBC1D12O60347 775 aa12.1□□□□□ -0.47
AP3S1-209ENST00000640413 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
AP3S1-209ENST00000640413 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
AP3S1-209ENST00000640413 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
AP3S1-209ENST00000640413 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
AP3S1-209ENST00000640413 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
AP3S1-209ENST00000640413 TK2O00142 265 aa12.03□□□□□ -0.48
AP3S1-209ENST00000640413 RYDENQ9NUL5 291 aaKnown RBP12.03□□□□□ -0.48
AP3S1-209ENST00000640413 HRO43593 1189 aa12.02□□□□□ -0.49
AP3S1-209ENST00000640413 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
AP3S1-209ENST00000640413 HCSTQ9UBK5 93 aa12.02□□□□□ -0.49
AP3S1-209ENST00000640413 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
AP3S1-209ENST00000640413 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
AP3S1-209ENST00000640413 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
AP3S1-209ENST00000640413 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
AP3S1-209ENST00000640413 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
AP3S1-209ENST00000640413 PDE4AP27815 886 aa11.96□□□□□ -0.49
AP3S1-209ENST00000640413 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
AP3S1-209ENST00000640413 STAC3Q96MF2 364 aa11.95□□□□□ -0.5
AP3S1-209ENST00000640413 KCNH8Q96L42 1107 aa11.94□□□□□ -0.5
AP3S1-209ENST00000640413 LARP6Q9BRS8 491 aaKnown RBP11.92□□□□□ -0.5
AP3S1-209ENST00000640413 VPS9D1Q9Y2B5 631 aa11.92□□□□□ -0.5
AP3S1-209ENST00000640413 DCAF8L2P0C7V8 631 aa11.9□□□□□ -0.5
AP3S1-209ENST00000640413 FOSBP53539 338 aa11.9□□□□□ -0.5
AP3S1-209ENST00000640413 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
AP3S1-209ENST00000640413 EVI5O60447 810 aa11.88□□□□□ -0.51
AP3S1-209ENST00000640413 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
AP3S1-209ENST00000640413 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
AP3S1-209ENST00000640413 PTPREP23469 700 aa11.85□□□□□ -0.51
AP3S1-209ENST00000640413 PTPN5P54829 565 aa11.84□□□□□ -0.51
AP3S1-209ENST00000640413 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
AP3S1-209ENST00000640413 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
AP3S1-209ENST00000640413 SLC4A5Q9BY07 1137 aa11.83□□□□□ -0.52
AP3S1-209ENST00000640413 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
AP3S1-209ENST00000640413 MFSD10Q14728 455 aa11.82□□□□□ -0.52
AP3S1-209ENST00000640413 ZDHHC16Q969W1 377 aa11.82□□□□□ -0.52
AP3S1-209ENST00000640413 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
AP3S1-209ENST00000640413 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
AP3S1-209ENST00000640413 EMILIN3Q9NT22 766 aa11.81□□□□□ -0.52
AP3S1-209ENST00000640413 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
AP3S1-209ENST00000640413 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
AP3S1-209ENST00000640413 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
AP3S1-209ENST00000640413 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
AP3S1-209ENST00000640413 WNT2BQ93097 391 aa11.74□□□□□ -0.53
AP3S1-209ENST00000640413 PCDHGA10Q9Y5H3 936 aa11.74□□□□□ -0.53
AP3S1-209ENST00000640413 COL9A1P20849 921 aa11.7□□□□□ -0.54
AP3S1-209ENST00000640413 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
AP3S1-209ENST00000640413 PPP1R3GB7ZBB8 358 aa11.69□□□□□ -0.54
AP3S1-209ENST00000640413 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
AP3S1-209ENST00000640413 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
AP3S1-209ENST00000640413 PHF14O94880 888 aa11.65□□□□□ -0.54
AP3S1-209ENST00000640413 DPYSL4O14531 572 aa11.64□□□□□ -0.55
AP3S1-209ENST00000640413 FBXW7Q969H0 707 aa11.64□□□□□ -0.55
AP3S1-209ENST00000640413 RABGEF1Q9UJ41 708 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 315.6 ms