RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
RTTN-217ENST00000640393 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
RTTN-217ENST00000640393 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
RTTN-217ENST00000640393 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
RTTN-217ENST00000640393 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
RTTN-217ENST00000640393 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
RTTN-217ENST00000640393 C2orf72A6NCS6 295 aa13.45□□□□□ -0.26
RTTN-217ENST00000640393 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
RTTN-217ENST00000640393 POTEJP0CG39 1038 aa13.42□□□□□ -0.26
RTTN-217ENST00000640393 DSG2Q14126 1118 aa13.42□□□□□ -0.26
RTTN-217ENST00000640393 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
RTTN-217ENST00000640393 E2F4Q16254 413 aa13.41□□□□□ -0.26
RTTN-217ENST00000640393 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
RTTN-217ENST00000640393 MFSD10Q14728 455 aa13.4□□□□□ -0.26
RTTN-217ENST00000640393 KCNV2Q8TDN2 545 aa13.39□□□□□ -0.27
RTTN-217ENST00000640393 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
RTTN-217ENST00000640393 BCANQ96GW7 911 aa13.37□□□□□ -0.27
RTTN-217ENST00000640393 KIF3CO14782 793 aa13.35□□□□□ -0.27
RTTN-217ENST00000640393 FOXK1P85037 733 aa13.34□□□□□ -0.27
RTTN-217ENST00000640393 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
RTTN-217ENST00000640393 NBR1Q14596 966 aa13.33□□□□□ -0.27
RTTN-217ENST00000640393 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
RTTN-217ENST00000640393 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
RTTN-217ENST00000640393 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
RTTN-217ENST00000640393 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
RTTN-217ENST00000640393 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
RTTN-217ENST00000640393 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
RTTN-217ENST00000640393 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
RTTN-217ENST00000640393 DPYSL4O14531 572 aa13.23□□□□□ -0.29
RTTN-217ENST00000640393 LHX8Q68G74 356 aa13.23□□□□□ -0.29
RTTN-217ENST00000640393 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
RTTN-217ENST00000640393 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
RTTN-217ENST00000640393 SEMA3EO15041 775 aa13.17□□□□□ -0.3
RTTN-217ENST00000640393 OXER1Q8TDS5 423 aa13.12□□□□□ -0.31
RTTN-217ENST00000640393 TBC1D12O60347 775 aa13.1□□□□□ -0.31
RTTN-217ENST00000640393 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
RTTN-217ENST00000640393 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
RTTN-217ENST00000640393 EVI5O60447 810 aa13.07□□□□□ -0.32
RTTN-217ENST00000640393 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
RTTN-217ENST00000640393 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
RTTN-217ENST00000640393 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
RTTN-217ENST00000640393 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
RTTN-217ENST00000640393 SLC34A2O95436 690 aa13.06□□□□□ -0.32
RTTN-217ENST00000640393 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
RTTN-217ENST00000640393 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
RTTN-217ENST00000640393 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
RTTN-217ENST00000640393 SPDYE16A6NNV3 312 aaPredicted RBP13.05□□□□□ -0.32
RTTN-217ENST00000640393 GRXCR2A6NFK2 248 aa13.04□□□□□ -0.32
RTTN-217ENST00000640393 TESPA1A2RU30 521 aaPredicted RBP13.03□□□□□ -0.32
RTTN-217ENST00000640393 PDIA6Q15084 440 aa13.03□□□□□ -0.32
RTTN-217ENST00000640393 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
RTTN-217ENST00000640393 DDX12PQ92771 950 aa13.02□□□□□ -0.33
RTTN-217ENST00000640393 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
RTTN-217ENST00000640393 SNPHO15079 494 aa13□□□□□ -0.33
RTTN-217ENST00000640393 NUDT7P0C024 238 aa12.99□□□□□ -0.33
RTTN-217ENST00000640393 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
RTTN-217ENST00000640393 SMYD5Q6GMV2 418 aa12.98□□□□□ -0.33
RTTN-217ENST00000640393 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
RTTN-217ENST00000640393 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
RTTN-217ENST00000640393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
RTTN-217ENST00000640393 LMOD2Q6P5Q4 547 aa12.96□□□□□ -0.33
RTTN-217ENST00000640393 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
RTTN-217ENST00000640393 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
RTTN-217ENST00000640393 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
RTTN-217ENST00000640393 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
RTTN-217ENST00000640393 ZSWIM6Q9HCJ5 1215 aa12.91□□□□□ -0.34
RTTN-217ENST00000640393 PTGER2P43116 358 aa12.88□□□□□ -0.35
RTTN-217ENST00000640393 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
RTTN-217ENST00000640393 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
RTTN-217ENST00000640393 KDM4FA0A1W2PPD8 638 aa12.86□□□□□ -0.35
RTTN-217ENST00000640393 OSBPP22059 807 aa12.86□□□□□ -0.35
RTTN-217ENST00000640393 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
RTTN-217ENST00000640393 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
RTTN-217ENST00000640393 NUTM2FA1L443 756 aa12.84□□□□□ -0.35
RTTN-217ENST00000640393 ST18O60284 1047 aa12.84□□□□□ -0.35
RTTN-217ENST00000640393 PCDHGA10Q9Y5H3 936 aa12.84□□□□□ -0.35
RTTN-217ENST00000640393 PHF14O94880 888 aa12.82□□□□□ -0.36
RTTN-217ENST00000640393 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
RTTN-217ENST00000640393 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
RTTN-217ENST00000640393 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
RTTN-217ENST00000640393 MAP3K7O43318 606 aa12.8□□□□□ -0.36
RTTN-217ENST00000640393 FOSBP53539 338 aa12.79□□□□□ -0.36
RTTN-217ENST00000640393 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
RTTN-217ENST00000640393 EPAS1Q99814 870 aa12.79□□□□□ -0.36
RTTN-217ENST00000640393 TYW1BQ6NUM6 668 aa12.78□□□□□ -0.36
RTTN-217ENST00000640393 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
RTTN-217ENST00000640393 ERBB3P21860 1342 aa12.76□□□□□ -0.37
RTTN-217ENST00000640393 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
RTTN-217ENST00000640393 EMP3P54852 163 aa12.75□□□□□ -0.37
RTTN-217ENST00000640393 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
RTTN-217ENST00000640393 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
RTTN-217ENST00000640393 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
RTTN-217ENST00000640393 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
RTTN-217ENST00000640393 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
RTTN-217ENST00000640393 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
RTTN-217ENST00000640393 CDHR5Q9HBB8 845 aa12.72□□□□□ -0.37
RTTN-217ENST00000640393 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.37
RTTN-217ENST00000640393 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
RTTN-217ENST00000640393 KRI1Q8N9T8 703 aaKnown RBP12.69□□□□□ -0.38
RTTN-217ENST00000640393 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms