RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 EMP3P54852 163 aa9.29□□□□□ -0.92
ATM-228ENST00000639240 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
ATM-228ENST00000639240 KIF3CO14782 793 aa9.27□□□□□ -0.93
ATM-228ENST00000639240 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
ATM-228ENST00000639240 HS6ST3Q8IZP7 471 aa9.27□□□□□ -0.93
ATM-228ENST00000639240 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
ATM-228ENST00000639240 NKX1-1Q15270 411 aaPredicted RBP9.25□□□□□ -0.93
ATM-228ENST00000639240 DOK7Q18PE1 504 aa9.25□□□□□ -0.93
ATM-228ENST00000639240 C2orf72A6NCS6 295 aa9.24□□□□□ -0.93
ATM-228ENST00000639240 GPR153Q6NV75 609 aa9.24□□□□□ -0.93
ATM-228ENST00000639240 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
ATM-228ENST00000639240 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
ATM-228ENST00000639240 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
ATM-228ENST00000639240 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
ATM-228ENST00000639240 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.941e-7■■■□□ 15
ATM-228ENST00000639240 DNAJC5Q9H3Z4 198 aa9.19□□□□□ -0.94
ATM-228ENST00000639240 ARSIQ5FYB1 569 aa9.18□□□□□ -0.94
ATM-228ENST00000639240 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
ATM-228ENST00000639240 ERBB3P21860 1342 aa9.15□□□□□ -0.94
ATM-228ENST00000639240 RIMBP2O15034 1052 aa9.14□□□□□ -0.95
ATM-228ENST00000639240 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
ATM-228ENST00000639240 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
ATM-228ENST00000639240 SLC34A2O95436 690 aa9.09□□□□□ -0.95
ATM-228ENST00000639240 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
ATM-228ENST00000639240 NUDT7P0C024 238 aa9.08□□□□□ -0.96
ATM-228ENST00000639240 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
ATM-228ENST00000639240 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
ATM-228ENST00000639240 ZNF687Q8N1G0 1237 aa9.07□□□□□ -0.96
ATM-228ENST00000639240 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
ATM-228ENST00000639240 KDM4FA0A1W2PPD8 638 aa9.06□□□□□ -0.96
ATM-228ENST00000639240 FOXK1P85037 733 aa9.06□□□□□ -0.96
ATM-228ENST00000639240 DSG2Q14126 1118 aa9.06□□□□□ -0.96
ATM-228ENST00000639240 AMER1Q5JTC6 1135 aaPredicted RBP9.05□□□□□ -0.96
ATM-228ENST00000639240 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
ATM-228ENST00000639240 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
ATM-228ENST00000639240 RTN4Q9NQC3 1192 aaKnown RBP9.04□□□□□ -0.96
ATM-228ENST00000639240 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
ATM-228ENST00000639240 NCKAP5LQ9HCH0 1330 aa9.03□□□□□ -0.96
ATM-228ENST00000639240 PTCD2Q8WV60 388 aaKnown RBP9.02□□□□□ -0.97
ATM-228ENST00000639240 CRISPLD2Q9H0B8 497 aa9.02□□□□□ -0.97
ATM-228ENST00000639240 DCAF8L2P0C7V8 631 aa8.99□□□□□ -0.97
ATM-228ENST00000639240 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
ATM-228ENST00000639240 AXIN2Q9Y2T1 843 aa8.96□□□□□ -0.98
ATM-228ENST00000639240 RYDENQ9NUL5 291 aaKnown RBP8.95□□□□□ -0.98
ATM-228ENST00000639240 OXER1Q8TDS5 423 aa8.94□□□□□ -0.98
ATM-228ENST00000639240 RNF166Q96A37 237 aaPredicted RBP8.94□□□□□ -0.98
ATM-228ENST00000639240 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
ATM-228ENST00000639240 LSM11P83369 360 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATM-228ENST00000639240 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
ATM-228ENST00000639240 UPF1Q92900 1129 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATM-228ENST00000639240 PDE4AP27815 886 aa8.9□□□□□ -0.98
ATM-228ENST00000639240 LARP6Q9BRS8 491 aaKnown RBP8.89□□□□□ -0.99
ATM-228ENST00000639240 MFSD10Q14728 455 aa8.88□□□□□ -0.99
ATM-228ENST00000639240 MYT1LQ9UL68 1186 aa8.87□□□□□ -0.99
ATM-228ENST00000639240 PBX2P40425 430 aa8.86□□□□□ -0.99
ATM-228ENST00000639240 PSEN2P49810 448 aa8.86□□□□□ -0.99
ATM-228ENST00000639240 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
ATM-228ENST00000639240 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
ATM-228ENST00000639240 DDX27Q96GQ7 796 aaKnown RBP8.85□□□□□ -0.99
ATM-228ENST00000639240 ARHGAP33O14559 1287 aa8.84□□□□□ -0.99
ATM-228ENST00000639240 TBC1D12O60347 775 aa8.84□□□□□ -0.99
ATM-228ENST00000639240 BBXQ8WY36 941 aaPredicted RBP8.84□□□□□ -0.99
ATM-228ENST00000639240 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
ATM-228ENST00000639240 PSDA5PKW4 1024 aaPredicted RBP8.82□□□□□ -1
ATM-228ENST00000639240 ADGRD1Q6QNK2 874 aa8.8□□□□□ -1
ATM-228ENST00000639240 HRO43593 1189 aa8.79□□□□□ -1
ATM-228ENST00000639240 EVI5O60447 810 aa8.79□□□□□ -1
ATM-228ENST00000639240 FOSBP53539 338 aa8.79□□□□□ -1
ATM-228ENST00000639240 PPP4R3BQ5MIZ7 849 aa8.79□□□□□ -1
ATM-228ENST00000639240 ZNF454Q8N9F8 522 aa8.78□□□□□ -1
ATM-228ENST00000639240 PTGER2P43116 358 aa8.77□□□□□ -1.01
ATM-228ENST00000639240 CAMK2BQ13554 666 aa8.76□□□□□ -1.01
ATM-228ENST00000639240 KCNK17Q96T54 332 aa8.76□□□□□ -1.01
ATM-228ENST00000639240 TK2O00142 265 aa8.74□□□□□ -1.01
ATM-228ENST00000639240 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
ATM-228ENST00000639240 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
ATM-228ENST00000639240 BCL2L12Q9HB09 334 aa8.74□□□□□ -1.01
ATM-228ENST00000639240 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
ATM-228ENST00000639240 JPH4Q96JJ6 628 aa8.73□□□□□ -1.01
ATM-228ENST00000639240 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
ATM-228ENST00000639240 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
ATM-228ENST00000639240 DPYSL4O14531 572 aa8.7□□□□□ -1.02
ATM-228ENST00000639240 PAXIP1Q6ZW49 1069 aaPredicted RBP8.69□□□□□ -1.02
ATM-228ENST00000639240 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
ATM-228ENST00000639240 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
ATM-228ENST00000639240 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
ATM-228ENST00000639240 BHMG1C9JSJ3 638 aaPredicted RBP8.67□□□□□ -1.02
ATM-228ENST00000639240 SLC4A5Q9BY07 1137 aa8.67□□□□□ -1.02
ATM-228ENST00000639240 COL9A1P20849 921 aa8.66□□□□□ -1.02
ATM-228ENST00000639240 PTPREP23469 700 aa8.66□□□□□ -1.02
ATM-228ENST00000639240 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.65□□□□□ -1.02
ATM-228ENST00000639240 PHF14O94880 888 aa8.63□□□□□ -1.03
ATM-228ENST00000639240 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
ATM-228ENST00000639240 PROX2Q3B8N5 592 aa8.62□□□□□ -1.03
ATM-228ENST00000639240 DDX12PQ92771 950 aa8.61□□□□□ -1.03
ATM-228ENST00000639240 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
ATM-228ENST00000639240 KCNH8Q96L42 1107 aa8.6□□□□□ -1.03
ATM-228ENST00000639240 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
ATM-228ENST00000639240 PRIM1P49642 420 aaKnown RBP8.59□□□□□ -1.03
ATM-228ENST00000639240 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms