RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 ARHGAP5Q13017 1502 aa14.82□□□□□ -0.04
PAX6-246ENST00000638963 PLCH2O75038 1416 aa14.8□□□□□ -0.04
PAX6-246ENST00000638963 ZNF777Q9ULD5 760 aaPredicted RBP14.79□□□□□ -0.04
PAX6-246ENST00000638963 ZNF644Q9H582 1327 aaPredicted RBP14.79□□□□□ -0.04
PAX6-246ENST00000638963 FGD6Q6ZV73 1430 aa14.78□□□□□ -0.04
PAX6-246ENST00000638963 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
PAX6-246ENST00000638963 FANCAO15360 1455 aa14.77□□□□□ -0.04
PAX6-246ENST00000638963 SAMD9LQ8IVG5 1584 aa14.77□□□□□ -0.04
PAX6-246ENST00000638963 PTPN23Q9H3S7 1636 aa14.77□□□□□ -0.05
PAX6-246ENST00000638963 ARAP3Q8WWN8 1544 aa14.75□□□□□ -0.05
PAX6-246ENST00000638963 CAMSAP2Q08AD1 1489 aa14.75□□□□□ -0.05
PAX6-246ENST00000638963 EFCAB2Q5VUJ9 269 aa14.73□□□□□ -0.05
PAX6-246ENST00000638963 MIA2Q96PC5 1412 aa14.73□□□□□ -0.05
PAX6-246ENST00000638963 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
PAX6-246ENST00000638963 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
PAX6-246ENST00000638963 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
PAX6-246ENST00000638963 ARHGEF12Q9NZN5 1544 aa14.72□□□□□ -0.05
PAX6-246ENST00000638963 AKNAQ7Z591 1439 aa14.72□□□□□ -0.05
PAX6-246ENST00000638963 RRBP1Q9P2E9 1410 aaKnown RBP14.72□□□□□ -0.05
PAX6-246ENST00000638963 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
PAX6-246ENST00000638963 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
PAX6-246ENST00000638963 ABCC1P33527 1531 aa14.71□□□□□ -0.05
PAX6-246ENST00000638963 ADGRL1O94910 1474 aa14.7□□□□□ -0.06
PAX6-246ENST00000638963 NEO1Q92859 1461 aa14.7□□□□□ -0.06
PAX6-246ENST00000638963 HNRNPMP52272 730 aaKnown RBP eCLIP14.7□□□□□ -0.06
PAX6-246ENST00000638963 SCAPERQ9BY12 1400 aa14.68□□□□□ -0.06
PAX6-246ENST00000638963 ITGAEP38570 1179 aa14.67□□□□□ -0.06
PAX6-246ENST00000638963 TRAPPC8Q9Y2L5 1435 aa14.67□□□□□ -0.06
PAX6-246ENST00000638963 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
PAX6-246ENST00000638963 MBD5Q9P267 1494 aa14.66□□□□□ -0.06
PAX6-246ENST00000638963 FRMPD1Q5SYB0 1578 aa14.65□□□□□ -0.06
PAX6-246ENST00000638963 PLEKHH2Q8IVE3 1493 aa14.65□□□□□ -0.06
PAX6-246ENST00000638963 DNMT1P26358 1616 aaKnown RBP14.65□□□□□ -0.06
PAX6-246ENST00000638963 RAPGEF3O95398 923 aa14.64□□□□□ -0.07
PAX6-246ENST00000638963 RICTORQ6R327 1708 aa14.64□□□□□ -0.07
PAX6-246ENST00000638963 KIAA1107Q9UPP5 1409 aa14.64□□□□□ -0.07
PAX6-246ENST00000638963 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
PAX6-246ENST00000638963 ARHGEF5Q12774 1597 aa14.63□□□□□ -0.07
PAX6-246ENST00000638963 ABCC5O15440 1437 aa14.63□□□□□ -0.07
PAX6-246ENST00000638963 POGZQ7Z3K3 1410 aa14.63□□□□□ -0.07
PAX6-246ENST00000638963 AFAP1Q8N556 730 aa14.63□□□□□ -0.07
PAX6-246ENST00000638963 DENND4BO75064 1496 aaPredicted RBP14.62□□□□□ -0.07
PAX6-246ENST00000638963 DAPK1P53355 1430 aa14.62□□□□□ -0.07
PAX6-246ENST00000638963 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
PAX6-246ENST00000638963 CCDC141Q6ZP82 1450 aa14.62□□□□□ -0.07
PAX6-246ENST00000638963 KDM6BO15054 1643 aa14.62□□□□□ -0.07
PAX6-246ENST00000638963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.61□□□□□ -0.07
PAX6-246ENST00000638963 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
PAX6-246ENST00000638963 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
PAX6-246ENST00000638963 KDM5CP41229 1560 aa14.58□□□□□ -0.08
PAX6-246ENST00000638963 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.08
PAX6-246ENST00000638963 C9orf84Q5VXU9 1444 aa14.57□□□□□ -0.08
PAX6-246ENST00000638963 INO80Q9ULG1 1556 aaPredicted RBP14.57□□□□□ -0.08
PAX6-246ENST00000638963 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
PAX6-246ENST00000638963 HECW2Q9P2P5 1572 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 KIDINS220Q9ULH0 1771 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 SPAG9O60271 1321 aaKnown RBP14.55□□□□□ -0.08
PAX6-246ENST00000638963 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 MAST1Q9Y2H9 1570 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 SHANK2Q9UPX8 1470 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
PAX6-246ENST00000638963 ATP7AQ04656 1500 aa14.54□□□□□ -0.08
PAX6-246ENST00000638963 TSPY4P0CV99 314 aa14.54□□□□□ -0.08
PAX6-246ENST00000638963 TSPY10P0CW01 314 aa14.54□□□□□ -0.08
PAX6-246ENST00000638963 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
PAX6-246ENST00000638963 YEATS2Q9ULM3 1422 aa14.54□□□□□ -0.08
PAX6-246ENST00000638963 RSPH4AQ5TD94 716 aa14.53□□□□□ -0.08
PAX6-246ENST00000638963 ABCA6Q8N139 1617 aa14.53□□□□□ -0.08
PAX6-246ENST00000638963 RRP7BPQ9NSQ0 103 aa14.52□□□□□ -0.08
PAX6-246ENST00000638963 PCGF6Q9BYE7 350 aa14.51□□□□□ -0.09
PAX6-246ENST00000638963 MLH3Q9UHC1 1453 aa14.51□□□□□ -0.09
PAX6-246ENST00000638963 DIP2CQ9Y2E4 1556 aa14.5□□□□□ -0.09
PAX6-246ENST00000638963 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
PAX6-246ENST00000638963 PLXNC1O60486 1568 aa14.5□□□□□ -0.09
PAX6-246ENST00000638963 RTEL1-TNFRSF6BF6WH68 1400 aa14.49□□□□□ -0.09
PAX6-246ENST00000638963 NCOA1Q15788 1441 aa14.49□□□□□ -0.09
PAX6-246ENST00000638963 ARHGEF40Q8TER5 1519 aa14.48□□□□□ -0.09
PAX6-246ENST00000638963 ANKRD30AQ9BXX3 1397 aa14.48□□□□□ -0.09
PAX6-246ENST00000638963 KIF15Q9NS87 1388 aa14.48□□□□□ -0.09
PAX6-246ENST00000638963 SIGLEC1Q9BZZ2 1709 aa14.47□□□□□ -0.09
PAX6-246ENST00000638963 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
PAX6-246ENST00000638963 MAGI2Q86UL8 1455 aa14.46□□□□□ -0.09
PAX6-246ENST00000638963 GCC2Q8IWJ2 1684 aa14.46□□□□□ -0.09
PAX6-246ENST00000638963 NAIPQ13075 1403 aa14.45□□□□□ -0.1
PAX6-246ENST00000638963 A2MP01023 1474 aa14.44□□□□□ -0.1
PAX6-246ENST00000638963 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
PAX6-246ENST00000638963 DUOX2Q9NRD8 1548 aa14.43□□□□□ -0.1
PAX6-246ENST00000638963 ATP10AO60312 1499 aa14.43□□□□□ -0.1
PAX6-246ENST00000638963 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
PAX6-246ENST00000638963 DHX29Q7Z478 1369 aaKnown RBP14.41□□□□□ -0.1
PAX6-246ENST00000638963 SETD5Q9C0A6 1442 aa14.4□□□□□ -0.1
PAX6-246ENST00000638963 ANKRD50Q9ULJ7 1429 aa14.4□□□□□ -0.1
PAX6-246ENST00000638963 RAB3GAP2Q9H2M9 1393 aa14.38□□□□□ -0.11
PAX6-246ENST00000638963 REREQ9P2R6 1566 aa14.38□□□□□ -0.11
PAX6-246ENST00000638963 ERBINQ96RT1 1412 aa14.38□□□□□ -0.11
PAX6-246ENST00000638963 EIF2AK4Q9P2K8 1649 aaKnown RBP14.36□□□□□ -0.11
PAX6-246ENST00000638963 KIF3BO15066 747 aa14.36□□□□□ -0.11
PAX6-246ENST00000638963 ARID4BQ4LE39 1312 aaPredicted RBP14.35□□□□□ -0.11
PAX6-246ENST00000638963 MROH1Q8NDA8 1641 aa14.35□□□□□ -0.11
PAX6-246ENST00000638963 MLECQ14165 292 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms