RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
KCNMA1-239ENST00000638531 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
KCNMA1-239ENST00000638531 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
KCNMA1-239ENST00000638531 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
KCNMA1-239ENST00000638531 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
KCNMA1-239ENST00000638531 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
KCNMA1-239ENST00000638531 POGZQ7Z3K3 1410 aa23.22■■□□□ 1.31
KCNMA1-239ENST00000638531 ABCC1P33527 1531 aa23.22■■□□□ 1.31
KCNMA1-239ENST00000638531 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
KCNMA1-239ENST00000638531 KDM4FA0A1W2PPD8 638 aa23.21■■□□□ 1.31
KCNMA1-239ENST00000638531 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
KCNMA1-239ENST00000638531 KDM5CP41229 1560 aa23.18■■□□□ 1.3
KCNMA1-239ENST00000638531 RAPGEF3O95398 923 aa23.18■■□□□ 1.3
KCNMA1-239ENST00000638531 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
KCNMA1-239ENST00000638531 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
KCNMA1-239ENST00000638531 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
KCNMA1-239ENST00000638531 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
KCNMA1-239ENST00000638531 ZFYVE16Q7Z3T8 1539 aa23.17■■□□□ 1.3
KCNMA1-239ENST00000638531 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
KCNMA1-239ENST00000638531 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
KCNMA1-239ENST00000638531 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
KCNMA1-239ENST00000638531 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
KCNMA1-239ENST00000638531 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
KCNMA1-239ENST00000638531 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
KCNMA1-239ENST00000638531 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
KCNMA1-239ENST00000638531 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.29
KCNMA1-239ENST00000638531 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
KCNMA1-239ENST00000638531 ADAMTSL3P82987 1691 aa23.08■■□□□ 1.29
KCNMA1-239ENST00000638531 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.28
KCNMA1-239ENST00000638531 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
KCNMA1-239ENST00000638531 YEATS2Q9ULM3 1422 aa23.06■■□□□ 1.28
KCNMA1-239ENST00000638531 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
KCNMA1-239ENST00000638531 ABCA6Q8N139 1617 aa23.05■■□□□ 1.28
KCNMA1-239ENST00000638531 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
KCNMA1-239ENST00000638531 DIP2CQ9Y2E4 1556 aa23.04■■□□□ 1.28
KCNMA1-239ENST00000638531 REREQ9P2R6 1566 aa23.02■■□□□ 1.28
KCNMA1-239ENST00000638531 MLH3Q9UHC1 1453 aa23.02■■□□□ 1.28
KCNMA1-239ENST00000638531 TRAPPC8Q9Y2L5 1435 aa23.01■■□□□ 1.27
KCNMA1-239ENST00000638531 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
KCNMA1-239ENST00000638531 KIAA1107Q9UPP5 1409 aa23■■□□□ 1.27
KCNMA1-239ENST00000638531 MADDQ8WXG6 1647 aa22.99■■□□□ 1.27
KCNMA1-239ENST00000638531 C9orf84Q5VXU9 1444 aa22.99■■□□□ 1.27
KCNMA1-239ENST00000638531 ATP10AO60312 1499 aa22.98■■□□□ 1.27
KCNMA1-239ENST00000638531 FER1L4A9Z1Z3 1794 aa22.97■■□□□ 1.27
KCNMA1-239ENST00000638531 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
KCNMA1-239ENST00000638531 RIMS1Q86UR5 1692 aaKnown RBP22.94■■□□□ 1.26
KCNMA1-239ENST00000638531 ATP7AQ04656 1500 aa22.94■■□□□ 1.26
KCNMA1-239ENST00000638531 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
KCNMA1-239ENST00000638531 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
KCNMA1-239ENST00000638531 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
KCNMA1-239ENST00000638531 ADGBQ8N7X0 1667 aa22.92■■□□□ 1.26
KCNMA1-239ENST00000638531 ARHGEF5Q12774 1597 aa22.91■■□□□ 1.26
KCNMA1-239ENST00000638531 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
KCNMA1-239ENST00000638531 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
KCNMA1-239ENST00000638531 AGLP35573 1532 aa22.88■■□□□ 1.25
KCNMA1-239ENST00000638531 MYOM3Q5VTT5 1437 aa22.88■■□□□ 1.25
KCNMA1-239ENST00000638531 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
KCNMA1-239ENST00000638531 PLXNC1O60486 1568 aa22.87■■□□□ 1.25
KCNMA1-239ENST00000638531 APLP2Q06481 763 aa22.86■■□□□ 1.25
KCNMA1-239ENST00000638531 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
KCNMA1-239ENST00000638531 PTPRMP28827 1452 aa22.85■■□□□ 1.25
KCNMA1-239ENST00000638531 MIA2Q96PC5 1412 aa22.84■■□□□ 1.25
KCNMA1-239ENST00000638531 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.25
KCNMA1-239ENST00000638531 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
KCNMA1-239ENST00000638531 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.25
KCNMA1-239ENST00000638531 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
KCNMA1-239ENST00000638531 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
KCNMA1-239ENST00000638531 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
KCNMA1-239ENST00000638531 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
KCNMA1-239ENST00000638531 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
KCNMA1-239ENST00000638531 MROH2AA6NES4 1674 aa22.75■■□□□ 1.23
KCNMA1-239ENST00000638531 A2MP01023 1474 aa22.75■■□□□ 1.23
KCNMA1-239ENST00000638531 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
KCNMA1-239ENST00000638531 DNMT1P26358 1616 aaKnown RBP22.74■■□□□ 1.23
KCNMA1-239ENST00000638531 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
KCNMA1-239ENST00000638531 TCOF1Q13428 1488 aaKnown RBP22.73■■□□□ 1.23
KCNMA1-239ENST00000638531 C3P01024 1663 aa22.72■■□□□ 1.23
KCNMA1-239ENST00000638531 RSPH4AQ5TD94 716 aa22.72■■□□□ 1.23
KCNMA1-239ENST00000638531 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
KCNMA1-239ENST00000638531 MLECQ14165 292 aa22.69■■□□□ 1.22
KCNMA1-239ENST00000638531 CLTCQ00610 1675 aaKnown RBP22.67■■□□□ 1.22
KCNMA1-239ENST00000638531 PREX1Q8TCU6 1659 aa22.67■■□□□ 1.22
KCNMA1-239ENST00000638531 EIF2AK4Q9P2K8 1649 aaKnown RBP22.67■■□□□ 1.22
KCNMA1-239ENST00000638531 RNF17Q9BXT8 1623 aaKnown RBP22.63■■□□□ 1.21
KCNMA1-239ENST00000638531 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
KCNMA1-239ENST00000638531 SETD1BQ9UPS6 1966 aaKnown RBP22.63■■□□□ 1.21
KCNMA1-239ENST00000638531 FAM135AQ9P2D6 1515 aa22.62■■□□□ 1.21
KCNMA1-239ENST00000638531 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
KCNMA1-239ENST00000638531 DAPK1P53355 1430 aa22.6■■□□□ 1.21
KCNMA1-239ENST00000638531 ABCC5O15440 1437 aa22.59■■□□□ 1.21
KCNMA1-239ENST00000638531 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
KCNMA1-239ENST00000638531 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
KCNMA1-239ENST00000638531 LMTK3Q96Q04 1460 aa22.59■■□□□ 1.21
KCNMA1-239ENST00000638531 ZC3H13Q5T200 1668 aaKnown RBP22.58■■□□□ 1.2
KCNMA1-239ENST00000638531 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
KCNMA1-239ENST00000638531 KDM5DQ9BY66 1539 aa22.54■■□□□ 1.2
KCNMA1-239ENST00000638531 MROH1Q8NDA8 1641 aa22.53■■□□□ 1.2
KCNMA1-239ENST00000638531 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
KCNMA1-239ENST00000638531 DEPDC5O75140 1603 aa22.52■■□□□ 1.2
KCNMA1-239ENST00000638531 ADGRL2O95490 1459 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms