RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 ARHGAP5Q13017 1502 aa30.17■■■□□ 2.42
HLA-A-209ENST00000638375 PHLDB1Q86UU1 1377 aa30.15■■■□□ 2.42
HLA-A-209ENST00000638375 NEO1Q92859 1461 aa30.14■■■□□ 2.42
HLA-A-209ENST00000638375 EFCAB2Q5VUJ9 269 aa30.13■■■□□ 2.41
HLA-A-209ENST00000638375 ITSN2Q9NZM3 1697 aa30.13■■■□□ 2.41
HLA-A-209ENST00000638375 MYOM3Q5VTT5 1437 aa30.11■■■□□ 2.41
HLA-A-209ENST00000638375 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
HLA-A-209ENST00000638375 CFDP1Q9UEE9 299 aaPredicted RBP30.1■■■□□ 2.41
HLA-A-209ENST00000638375 AKNAQ7Z591 1439 aa30.1■■■□□ 2.41
HLA-A-209ENST00000638375 COL17A1Q9UMD9 1497 aaPredicted RBP30.05■■■□□ 2.4
HLA-A-209ENST00000638375 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
HLA-A-209ENST00000638375 ZNF777Q9ULD5 760 aaPredicted RBP30.04■■■□□ 2.4
HLA-A-209ENST00000638375 ADGRL1O94910 1474 aa30.02■■■□□ 2.4
HLA-A-209ENST00000638375 MIA2Q96PC5 1412 aa30.02■■■□□ 2.4
HLA-A-209ENST00000638375 ZNF644Q9H582 1327 aaPredicted RBP30.01■■■□□ 2.4
HLA-A-209ENST00000638375 ABCC1P33527 1531 aa30■■■□□ 2.39
HLA-A-209ENST00000638375 FGD6Q6ZV73 1430 aa29.99■■■□□ 2.39
HLA-A-209ENST00000638375 KDM6BO15054 1643 aa29.99■■■□□ 2.39
HLA-A-209ENST00000638375 SCAPERQ9BY12 1400 aa29.98■■■□□ 2.39
HLA-A-209ENST00000638375 ARHGEF12Q9NZN5 1544 aa29.97■■■□□ 2.39
HLA-A-209ENST00000638375 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
HLA-A-209ENST00000638375 DENND4BO75064 1496 aaPredicted RBP29.94■■■□□ 2.38
HLA-A-209ENST00000638375 SYCP2Q9BX26 1530 aa29.94■■■□□ 2.38
HLA-A-209ENST00000638375 KIAA1107Q9UPP5 1409 aa29.94■■■□□ 2.38
HLA-A-209ENST00000638375 PLEKHH2Q8IVE3 1493 aa29.93■■■□□ 2.38
HLA-A-209ENST00000638375 PTPN23Q9H3S7 1636 aa29.92■■■□□ 2.38
HLA-A-209ENST00000638375 FRMPD1Q5SYB0 1578 aa29.91■■■□□ 2.38
HLA-A-209ENST00000638375 RAPGEF3O95398 923 aa29.91■■■□□ 2.38
HLA-A-209ENST00000638375 TCOF1Q13428 1488 aaKnown RBP29.91■■■□□ 2.38
HLA-A-209ENST00000638375 POGZQ7Z3K3 1410 aa29.9■■■□□ 2.38
HLA-A-209ENST00000638375 HNRNPMP52272 730 aaKnown RBP eCLIP29.9■■■□□ 2.38
HLA-A-209ENST00000638375 TRAPPC8Q9Y2L5 1435 aa29.89■■■□□ 2.38
HLA-A-209ENST00000638375 MBD5Q9P267 1494 aa29.89■■■□□ 2.38
HLA-A-209ENST00000638375 RICTORQ6R327 1708 aa29.88■■■□□ 2.37
HLA-A-209ENST00000638375 AFAP1Q8N556 730 aa29.84■■■□□ 2.37
HLA-A-209ENST00000638375 ZNF518AQ6AHZ1 1483 aa29.84■■■□□ 2.37
HLA-A-209ENST00000638375 RRBP1Q9P2E9 1410 aaKnown RBP29.82■■■□□ 2.36
HLA-A-209ENST00000638375 KDM5CP41229 1560 aa29.81■■■□□ 2.36
HLA-A-209ENST00000638375 ARHGEF5Q12774 1597 aa29.81■■■□□ 2.36
HLA-A-209ENST00000638375 FAM50AQ14320 339 aaKnown RBP29.79■■■□□ 2.36
HLA-A-209ENST00000638375 ZMYM4Q5VZL5 1548 aa29.79■■■□□ 2.36
HLA-A-209ENST00000638375 CCDC141Q6ZP82 1450 aa29.78■■■□□ 2.36
HLA-A-209ENST00000638375 RSPH4AQ5TD94 716 aa29.74■■■□□ 2.35
HLA-A-209ENST00000638375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.73■■■□□ 2.35
HLA-A-209ENST00000638375 ABCC5O15440 1437 aa29.72■■■□□ 2.35
HLA-A-209ENST00000638375 DNMT1P26358 1616 aaKnown RBP29.72■■■□□ 2.35
HLA-A-209ENST00000638375 DAPK1P53355 1430 aa29.71■■■□□ 2.35
HLA-A-209ENST00000638375 MLH3Q9UHC1 1453 aa29.71■■■□□ 2.35
HLA-A-209ENST00000638375 HECW2Q9P2P5 1572 aa29.71■■■□□ 2.35
HLA-A-209ENST00000638375 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.34
HLA-A-209ENST00000638375 MAGI2Q86UL8 1455 aa29.69■■■□□ 2.34
HLA-A-209ENST00000638375 YEATS2Q9ULM3 1422 aa29.69■■■□□ 2.34
HLA-A-209ENST00000638375 INO80Q9ULG1 1556 aaPredicted RBP29.67■■■□□ 2.34
HLA-A-209ENST00000638375 ZFYVE16Q7Z3T8 1539 aa29.66■■■□□ 2.34
HLA-A-209ENST00000638375 KIDINS220Q9ULH0 1771 aa29.66■■■□□ 2.34
HLA-A-209ENST00000638375 ATP7AQ04656 1500 aa29.66■■■□□ 2.34
HLA-A-209ENST00000638375 CROCC2H7BZ55 1655 aa29.65■■■□□ 2.34
HLA-A-209ENST00000638375 ARHGEF40Q8TER5 1519 aa29.65■■■□□ 2.34
HLA-A-209ENST00000638375 SHANK2Q9UPX8 1470 aa29.64■■■□□ 2.34
HLA-A-209ENST00000638375 TSPY4P0CV99 314 aa29.64■■■□□ 2.34
HLA-A-209ENST00000638375 TSPY10P0CW01 314 aa29.64■■■□□ 2.34
HLA-A-209ENST00000638375 MAST1Q9Y2H9 1570 aa29.64■■■□□ 2.33
HLA-A-209ENST00000638375 RTEL1-TNFRSF6BF6WH68 1400 aa29.63■■■□□ 2.33
HLA-A-209ENST00000638375 C9orf84Q5VXU9 1444 aa29.63■■■□□ 2.33
HLA-A-209ENST00000638375 MYT1LQ9UL68 1186 aa29.63■■■□□ 2.33
HLA-A-209ENST00000638375 PTPRKQ15262 1439 aa29.62■■■□□ 2.33
HLA-A-209ENST00000638375 ABCA6Q8N139 1617 aa29.6■■■□□ 2.33
HLA-A-209ENST00000638375 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
HLA-A-209ENST00000638375 ITGAEP38570 1179 aa29.57■■■□□ 2.32
HLA-A-209ENST00000638375 CHIC2Q9UKJ5 165 aa29.56■■■□□ 2.32
HLA-A-209ENST00000638375 ATP10AO60312 1499 aa29.55■■■□□ 2.32
HLA-A-209ENST00000638375 ADGRL2O95490 1459 aa29.52■■■□□ 2.32
HLA-A-209ENST00000638375 PLXNC1O60486 1568 aa29.52■■■□□ 2.32
HLA-A-209ENST00000638375 NCOA1Q15788 1441 aa29.48■■■□□ 2.31
HLA-A-209ENST00000638375 ADGBQ8N7X0 1667 aa29.48■■■□□ 2.31
HLA-A-209ENST00000638375 REREQ9P2R6 1566 aa29.47■■■□□ 2.31
HLA-A-209ENST00000638375 ANKRD30AQ9BXX3 1397 aa29.47■■■□□ 2.31
HLA-A-209ENST00000638375 A2MP01023 1474 aa29.47■■■□□ 2.31
HLA-A-209ENST00000638375 SIGLEC1Q9BZZ2 1709 aa29.46■■■□□ 2.31
HLA-A-209ENST00000638375 KIF15Q9NS87 1388 aa29.45■■■□□ 2.31
HLA-A-209ENST00000638375 RRP7BPQ9NSQ0 103 aa29.45■■■□□ 2.31
HLA-A-209ENST00000638375 ROCK1Q13464 1354 aa29.44■■■□□ 2.3
HLA-A-209ENST00000638375 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
HLA-A-209ENST00000638375 DUOX2Q9NRD8 1548 aa29.4■■■□□ 2.3
HLA-A-209ENST00000638375 AGLP35573 1532 aa29.38■■■□□ 2.29
HLA-A-209ENST00000638375 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
HLA-A-209ENST00000638375 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
HLA-A-209ENST00000638375 NAIPQ13075 1403 aa29.29■■■□□ 2.28
HLA-A-209ENST00000638375 ANKRD50Q9ULJ7 1429 aa29.29■■■□□ 2.28
HLA-A-209ENST00000638375 TRIM26Q12899 539 aaPredicted RBP29.29■■■□□ 2.28
HLA-A-209ENST00000638375 HFM1A2PYH4 1435 aa29.28■■■□□ 2.28
HLA-A-209ENST00000638375 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
HLA-A-209ENST00000638375 KIF3BO15066 747 aa29.27■■■□□ 2.28
HLA-A-209ENST00000638375 BCORL1Q5H9F3 1711 aa29.27■■■□□ 2.28
HLA-A-209ENST00000638375 MLECQ14165 292 aa29.26■■■□□ 2.27
HLA-A-209ENST00000638375 GCC2Q8IWJ2 1684 aa29.25■■■□□ 2.27
HLA-A-209ENST00000638375 RNF17Q9BXT8 1623 aaKnown RBP29.21■■■□□ 2.27
HLA-A-209ENST00000638375 GGT6Q6P531 493 aa29.2■■■□□ 2.26
HLA-A-209ENST00000638375 MROH1Q8NDA8 1641 aa29.18■■■□□ 2.26
HLA-A-209ENST00000638375 ADAMTSL3P82987 1691 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms