RNA–Protein interactions for RNA: ENST00000638366.1

KCNC1-205, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-205ENST00000638366 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
KCNC1-205ENST00000638366 CDC42BPBQ9Y5S2 1711 aa17.49■□□□□ 0.39
KCNC1-205ENST00000638366 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
KCNC1-205ENST00000638366 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
KCNC1-205ENST00000638366 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
KCNC1-205ENST00000638366 ABCA6Q8N139 1617 aa17.46■□□□□ 0.39
KCNC1-205ENST00000638366 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
KCNC1-205ENST00000638366 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
KCNC1-205ENST00000638366 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
KCNC1-205ENST00000638366 PLCH2O75038 1416 aa17.45■□□□□ 0.38
KCNC1-205ENST00000638366 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
KCNC1-205ENST00000638366 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
KCNC1-205ENST00000638366 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
KCNC1-205ENST00000638366 C3P01024 1663 aa17.42■□□□□ 0.38
KCNC1-205ENST00000638366 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
KCNC1-205ENST00000638366 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
KCNC1-205ENST00000638366 CDC42BPAQ5VT25 1732 aa17.41■□□□□ 0.38
KCNC1-205ENST00000638366 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
KCNC1-205ENST00000638366 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
KCNC1-205ENST00000638366 ABCC1P33527 1531 aa17.4■□□□□ 0.38
KCNC1-205ENST00000638366 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
KCNC1-205ENST00000638366 ATP10AO60312 1499 aa17.39■□□□□ 0.37
KCNC1-205ENST00000638366 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
KCNC1-205ENST00000638366 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
KCNC1-205ENST00000638366 KIDINS220Q9ULH0 1771 aa17.35■□□□□ 0.37
KCNC1-205ENST00000638366 MROH2AA6NES4 1674 aa17.34■□□□□ 0.37
KCNC1-205ENST00000638366 HSPA2P54652 639 aa17.34■□□□□ 0.37
KCNC1-205ENST00000638366 CLIP1P30622 1438 aa17.32■□□□□ 0.36
KCNC1-205ENST00000638366 AGLP35573 1532 aa17.31■□□□□ 0.36
KCNC1-205ENST00000638366 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
KCNC1-205ENST00000638366 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
KCNC1-205ENST00000638366 ZNF142P52746 1687 aaPredicted RBP17.28■□□□□ 0.36
KCNC1-205ENST00000638366 MLECQ14165 292 aa17.27■□□□□ 0.36
KCNC1-205ENST00000638366 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.35
KCNC1-205ENST00000638366 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
KCNC1-205ENST00000638366 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
KCNC1-205ENST00000638366 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
KCNC1-205ENST00000638366 INO80Q9ULG1 1556 aaPredicted RBP17.25■□□□□ 0.35
KCNC1-205ENST00000638366 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
KCNC1-205ENST00000638366 FYCO1Q9BQS8 1478 aa17.24■□□□□ 0.35
KCNC1-205ENST00000638366 PLXNC1O60486 1568 aa17.23■□□□□ 0.35
KCNC1-205ENST00000638366 MYO3AQ8NEV4 1616 aa17.23■□□□□ 0.35
KCNC1-205ENST00000638366 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
KCNC1-205ENST00000638366 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
KCNC1-205ENST00000638366 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
KCNC1-205ENST00000638366 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
KCNC1-205ENST00000638366 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
KCNC1-205ENST00000638366 CLTCQ00610 1675 aaKnown RBP17.21■□□□□ 0.35
KCNC1-205ENST00000638366 SPATA31D1Q6ZQQ2 1576 aa17.2■□□□□ 0.34
KCNC1-205ENST00000638366 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
KCNC1-205ENST00000638366 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
KCNC1-205ENST00000638366 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
KCNC1-205ENST00000638366 PTPRTO14522 1441 aa17.17■□□□□ 0.34
KCNC1-205ENST00000638366 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
KCNC1-205ENST00000638366 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
KCNC1-205ENST00000638366 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
KCNC1-205ENST00000638366 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
KCNC1-205ENST00000638366 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
KCNC1-205ENST00000638366 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
KCNC1-205ENST00000638366 ATP1B4Q9UN42 357 aaPredicted RBP17.15■□□□□ 0.34
KCNC1-205ENST00000638366 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
KCNC1-205ENST00000638366 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
KCNC1-205ENST00000638366 NPATQ14207 1427 aa17.13■□□□□ 0.33
KCNC1-205ENST00000638366 CEP170BQ9Y4F5 1589 aaPredicted RBP17.11■□□□□ 0.33
KCNC1-205ENST00000638366 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
KCNC1-205ENST00000638366 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
KCNC1-205ENST00000638366 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
KCNC1-205ENST00000638366 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
KCNC1-205ENST00000638366 PLEKHH2Q8IVE3 1493 aa17.06■□□□□ 0.32
KCNC1-205ENST00000638366 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
KCNC1-205ENST00000638366 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
KCNC1-205ENST00000638366 MYT1LQ9UL68 1186 aa17.04■□□□□ 0.32
KCNC1-205ENST00000638366 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
KCNC1-205ENST00000638366 A2MP01023 1474 aa17.03■□□□□ 0.32
KCNC1-205ENST00000638366 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
KCNC1-205ENST00000638366 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
KCNC1-205ENST00000638366 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
KCNC1-205ENST00000638366 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
KCNC1-205ENST00000638366 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
KCNC1-205ENST00000638366 ESF1Q9H501 851 aaKnown RBP16.99■□□□□ 0.31
KCNC1-205ENST00000638366 NEURL4Q96JN8 1562 aa16.98■□□□□ 0.31
KCNC1-205ENST00000638366 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
KCNC1-205ENST00000638366 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
KCNC1-205ENST00000638366 KDM5DQ9BY66 1539 aa16.96■□□□□ 0.3
KCNC1-205ENST00000638366 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
KCNC1-205ENST00000638366 ILDR2Q71H61 639 aa16.94■□□□□ 0.3
KCNC1-205ENST00000638366 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
KCNC1-205ENST00000638366 A2ML1A8K2U0 1454 aa16.93■□□□□ 0.3
KCNC1-205ENST00000638366 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
KCNC1-205ENST00000638366 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
KCNC1-205ENST00000638366 ZNF777Q9ULD5 760 aaPredicted RBP16.91■□□□□ 0.3
KCNC1-205ENST00000638366 MTUS2Q5JR59 1369 aa16.9■□□□□ 0.3
KCNC1-205ENST00000638366 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
KCNC1-205ENST00000638366 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.3
KCNC1-205ENST00000638366 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
KCNC1-205ENST00000638366 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
KCNC1-205ENST00000638366 PZPP20742 1482 aa16.89■□□□□ 0.29
KCNC1-205ENST00000638366 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
KCNC1-205ENST00000638366 CCDC141Q6ZP82 1450 aa16.89■□□□□ 0.29
KCNC1-205ENST00000638366 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms