RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 MTMR7Q9Y216 660 aa4.33□□□□□ -1.72
HMHB1-202ENST00000638299 ARIH1Q9Y4X5 557 aaPredicted RBP4.33□□□□□ -1.72
HMHB1-202ENST00000638299 GPR37O15354 613 aa4.32□□□□□ -1.72
HMHB1-202ENST00000638299 FOXD4L5Q5VV16 416 aaPredicted RBP4.32□□□□□ -1.72
HMHB1-202ENST00000638299 ZNF467Q7Z7K2 595 aaPredicted RBP4.32□□□□□ -1.72
HMHB1-202ENST00000638299 EFCAB3Q8N7B9 438 aa4.32□□□□□ -1.72
HMHB1-202ENST00000638299 FOXD4L4Q8WXT5 416 aaPredicted RBP4.32□□□□□ -1.72
HMHB1-202ENST00000638299 TRAIPQ9BWF2 469 aa4.32□□□□□ -1.72
HMHB1-202ENST00000638299 CLEC11AQ9Y240 323 aa4.32□□□□□ -1.72
HMHB1-202ENST00000638299 PRR29P0C7W0 189 aa4.31□□□□□ -1.72
HMHB1-202ENST00000638299 PDE4AP27815 886 aa4.31□□□□□ -1.72
HMHB1-202ENST00000638299 TSPYL2Q9H2G4 693 aaPredicted RBP4.31□□□□□ -1.72
HMHB1-202ENST00000638299 NLRP6P59044 892 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 CAMK2BQ13554 666 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 PARP9Q8IXQ6 854 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 POM121Q96HA1 1249 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 DDRGK1Q96HY6 314 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 CRISPLD2Q9H0B8 497 aa4.3□□□□□ -1.72
HMHB1-202ENST00000638299 GZF1Q9H116 711 aaPredicted RBP4.3□□□□□ -1.72
HMHB1-202ENST00000638299 IRF5Q13568 498 aa4.29□□□□□ -1.72
HMHB1-202ENST00000638299 SPDYE1Q8NFV5 336 aaPredicted RBP4.29□□□□□ -1.72
HMHB1-202ENST00000638299 CCDC102AQ96A19 550 aa4.29□□□□□ -1.72
HMHB1-202ENST00000638299 DDX27Q96GQ7 796 aaKnown RBP4.29□□□□□ -1.72
HMHB1-202ENST00000638299 RBM25P49756 843 aaKnown RBP4.28□□□□□ -1.72
HMHB1-202ENST00000638299 MCM6Q14566 821 aa4.28□□□□□ -1.72
HMHB1-202ENST00000638299 RETREG2Q8NC44 543 aa4.28□□□□□ -1.72
HMHB1-202ENST00000638299 MS4A4AQ96JQ5 239 aa4.28□□□□□ -1.72
HMHB1-202ENST00000638299 CABP2Q9NPB3 220 aa4.28□□□□□ -1.72
HMHB1-202ENST00000638299 FECHP22830 423 aa4.27□□□□□ -1.73
HMHB1-202ENST00000638299 MFAP1P55081 439 aaKnown RBP4.27□□□□□ -1.73
HMHB1-202ENST00000638299 PROSER2Q86WR7 435 aaPredicted RBP4.27□□□□□ -1.73
HMHB1-202ENST00000638299 FNBP4Q8N3X1 1017 aaPredicted RBP4.27□□□□□ -1.73
HMHB1-202ENST00000638299 SHROOM4Q9ULL8 1493 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 DPYSL4O14531 572 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 IRF6O14896 467 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 MS4A1P11836 297 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 AMHR2Q16671 573 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 TMCO4Q5TGY1 634 aa4.26□□□□□ -1.73
HMHB1-202ENST00000638299 MINK1Q8N4C8 1332 aaPredicted RBP4.25□□□□□ -1.73
HMHB1-202ENST00000638299 SOX12O15370 315 aa4.25□□□□□ -1.73
HMHB1-202ENST00000638299 ZNF579Q8NAF0 562 aaKnown RBP4.25□□□□□ -1.73
HMHB1-202ENST00000638299 EMILIN3Q9NT22 766 aa4.25□□□□□ -1.73
HMHB1-202ENST00000638299 MAP2K5Q13163 448 aa4.24□□□□□ -1.73
HMHB1-202ENST00000638299 IFNL1Q8IU54 200 aa4.24□□□□□ -1.73
HMHB1-202ENST00000638299 CCDC97Q96F63 343 aaPredicted RBP4.24□□□□□ -1.73
HMHB1-202ENST00000638299 PCMTD1Q96MG8 357 aaPredicted RBP4.24□□□□□ -1.73
HMHB1-202ENST00000638299 REPIN1Q9BWE0 567 aaKnown RBP4.24□□□□□ -1.73
HMHB1-202ENST00000638299 GOPCQ9HD26 462 aa4.24□□□□□ -1.73
HMHB1-202ENST00000638299 SERPINA10Q9UK55 444 aa4.24□□□□□ -1.73
HMHB1-202ENST00000638299 NUTM2FA1L443 756 aa4.23□□□□□ -1.73
HMHB1-202ENST00000638299 TTLL12Q14166 644 aaPredicted RBP4.22□□□□□ -1.73
HMHB1-202ENST00000638299 PPP1R15BQ5SWA1 713 aa4.22□□□□□ -1.73
HMHB1-202ENST00000638299 CHADLQ6NUI6 762 aa4.22□□□□□ -1.73
HMHB1-202ENST00000638299 PROCA1Q8NCQ7 364 aaPredicted RBP4.22□□□□□ -1.73
HMHB1-202ENST00000638299 OXER1Q8TDS5 423 aa4.22□□□□□ -1.73
HMHB1-202ENST00000638299 PLSCR2Q9NRY7 297 aa4.22□□□□□ -1.73
HMHB1-202ENST00000638299 CCDC61Q9Y6R9 512 aa4.22□□□□□ -1.73
HMHB1-202ENST00000638299 GRXCR2A6NFK2 248 aa4.21□□□□□ -1.74
HMHB1-202ENST00000638299 PDIA6Q15084 440 aa4.21□□□□□ -1.74
HMHB1-202ENST00000638299 GIGYF2Q6Y7W6 1299 aaKnown RBP4.21□□□□□ -1.74
HMHB1-202ENST00000638299 COG6Q9Y2V7 657 aa4.21□□□□□ -1.74
HMHB1-202ENST00000638299 GNPATO15228 680 aa4.2□□□□□ -1.74
HMHB1-202ENST00000638299 REM2Q8IYK8 340 aaPredicted RBP4.2□□□□□ -1.74
HMHB1-202ENST00000638299 SPDYE16A6NNV3 312 aaPredicted RBP4.19□□□□□ -1.74
HMHB1-202ENST00000638299 MAP3K13O43283 966 aa4.19□□□□□ -1.74
HMHB1-202ENST00000638299 SH3D19Q5HYK7 790 aa4.19□□□□□ -1.74
HMHB1-202ENST00000638299 FBXW7Q969H0 707 aa4.19□□□□□ -1.74
HMHB1-202ENST00000638299 AKT1S1Q96B36 256 aa4.19□□□□□ -1.74
HMHB1-202ENST00000638299 SNRKQ9NRH2 765 aa4.19□□□□□ -1.74
HMHB1-202ENST00000638299 CARNS1A5YM72 827 aa4.18□□□□□ -1.74
HMHB1-202ENST00000638299 OSBPP22059 807 aa4.18□□□□□ -1.74
HMHB1-202ENST00000638299 PRIM1P49642 420 aaKnown RBP4.18□□□□□ -1.74
HMHB1-202ENST00000638299 DSG2Q14126 1118 aa4.18□□□□□ -1.74
HMHB1-202ENST00000638299 FBXO31Q5XUX0 539 aaPredicted RBP4.18□□□□□ -1.74
HMHB1-202ENST00000638299 ZNF330Q9Y3S2 320 aaPredicted RBP4.18□□□□□ -1.74
HMHB1-202ENST00000638299 E9PSI1 815 aa4.17□□□□□ -1.74
HMHB1-202ENST00000638299 SKIV2LQ15477 1246 aaKnown RBP4.17□□□□□ -1.74
HMHB1-202ENST00000638299 GPHNQ9NQX3 736 aaPredicted RBP4.17□□□□□ -1.74
HMHB1-202ENST00000638299 POLR3EQ9NVU0 708 aa4.17□□□□□ -1.74
HMHB1-202ENST00000638299 PITPNM1O00562 1244 aa4.16□□□□□ -1.74
HMHB1-202ENST00000638299 HIC1Q14526 733 aa4.16□□□□□ -1.74
HMHB1-202ENST00000638299 TMUB1Q9BVT8 246 aa4.16□□□□□ -1.74
HMHB1-202ENST00000638299 ATP1B4Q9UN42 357 aaPredicted RBP4.16□□□□□ -1.74
HMHB1-202ENST00000638299 POM121CA8CG34 1229 aa4.15□□□□□ -1.75
HMHB1-202ENST00000638299 FCHSD2O94868 740 aa4.15□□□□□ -1.75
HMHB1-202ENST00000638299 KIF12Q96FN5 646 aa4.15□□□□□ -1.75
HMHB1-202ENST00000638299 FARP1Q9Y4F1 1045 aaPredicted RBP4.15□□□□□ -1.75
HMHB1-202ENST00000638299 PHOX2BQ99453 314 aa4.14□□□□□ -1.75
HMHB1-202ENST00000638299 USP35Q9P2H5 1018 aa4.14□□□□□ -1.75
HMHB1-202ENST00000638299 SPDYE5A6NIY4 337 aa4.13□□□□□ -1.75
HMHB1-202ENST00000638299 SSTR3P32745 418 aaPredicted RBP4.13□□□□□ -1.75
HMHB1-202ENST00000638299 MDM2Q00987 491 aaPredicted RBP4.13□□□□□ -1.75
HMHB1-202ENST00000638299 NLRP7Q8WX94 980 aa4.13□□□□□ -1.75
HMHB1-202ENST00000638299 DDX12PQ92771 950 aa4.13□□□□□ -1.75
HMHB1-202ENST00000638299 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMHB1-202ENST00000638299 GDPD2Q9HCC8 539 aa4.13□□□□□ -1.75
HMHB1-202ENST00000638299 ACIN1Q9UKV3 1341 aaKnown RBP4.13□□□□□ -1.75
HMHB1-202ENST00000638299 UNCXA6NJT0 531 aa4.12□□□□□ -1.75
HMHB1-202ENST00000638299 PPP1R15AO75807 674 aaPredicted RBP4.12□□□□□ -1.75
HMHB1-202ENST00000638299 RFX1P22670 979 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms