RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 ABCC2Q92887 1545 aa9.81□□□□□ -0.84
RTTN-211ENST00000638251 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
RTTN-211ENST00000638251 ZNF644Q9H582 1327 aaPredicted RBP9.8□□□□□ -0.84
RTTN-211ENST00000638251 ABCA8O94911 1581 aa9.8□□□□□ -0.84
RTTN-211ENST00000638251 ITSN2Q9NZM3 1697 aa9.8□□□□□ -0.84
RTTN-211ENST00000638251 HFM1A2PYH4 1435 aa9.8□□□□□ -0.84
RTTN-211ENST00000638251 DAPK1P53355 1430 aa9.79□□□□□ -0.84
RTTN-211ENST00000638251 SPAG9O60271 1321 aaKnown RBP9.79□□□□□ -0.84
RTTN-211ENST00000638251 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
RTTN-211ENST00000638251 ARHGEF11O15085 1522 aa9.78□□□□□ -0.84
RTTN-211ENST00000638251 MPHOSPH9Q99550 1183 aa9.78□□□□□ -0.84
RTTN-211ENST00000638251 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
RTTN-211ENST00000638251 TCOF1Q13428 1488 aaKnown RBP9.78□□□□□ -0.84
RTTN-211ENST00000638251 KANK1Q14678 1352 aa9.77□□□□□ -0.84
RTTN-211ENST00000638251 GPATCH8Q9UKJ3 1502 aaKnown RBP9.77□□□□□ -0.85
RTTN-211ENST00000638251 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
RTTN-211ENST00000638251 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
RTTN-211ENST00000638251 SIN3AQ96ST3 1273 aa9.76□□□□□ -0.85
RTTN-211ENST00000638251 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
RTTN-211ENST00000638251 NUP155O75694 1391 aa9.75□□□□□ -0.85
RTTN-211ENST00000638251 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
RTTN-211ENST00000638251 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
RTTN-211ENST00000638251 ABCC5O15440 1437 aa9.74□□□□□ -0.85
RTTN-211ENST00000638251 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
RTTN-211ENST00000638251 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
RTTN-211ENST00000638251 AKNAQ7Z591 1439 aa9.74□□□□□ -0.85
RTTN-211ENST00000638251 CCDC141Q6ZP82 1450 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
RTTN-211ENST00000638251 PKD2Q13563 968 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 NAIPQ13075 1403 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 WDR7Q9Y4E6 1490 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 SHROOM2Q13796 1616 aa9.73□□□□□ -0.85
RTTN-211ENST00000638251 PLCH2O75038 1416 aa9.71□□□□□ -0.86
RTTN-211ENST00000638251 ASXL2Q76L83 1435 aa9.7□□□□□ -0.86
RTTN-211ENST00000638251 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
RTTN-211ENST00000638251 POLR3GLQ9BT43 218 aa9.69□□□□□ -0.86
RTTN-211ENST00000638251 KDM5BQ9UGL1 1544 aa9.69□□□□□ -0.86
RTTN-211ENST00000638251 ERCC6L2Q5T890 1561 aa9.68□□□□□ -0.86
RTTN-211ENST00000638251 CD109Q6YHK3 1445 aa9.68□□□□□ -0.86
RTTN-211ENST00000638251 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
RTTN-211ENST00000638251 DNMT1P26358 1616 aaKnown RBP9.67□□□□□ -0.86
RTTN-211ENST00000638251 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 FOXD1Q16676 465 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 PTPRKQ15262 1439 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 SHANK2Q9UPX8 1470 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 KIF3BO15066 747 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 NCOA1Q15788 1441 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 ABCC10Q5T3U5 1492 aa9.67□□□□□ -0.86
RTTN-211ENST00000638251 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
RTTN-211ENST00000638251 CHGAP10645 457 aaKnown RBP9.66□□□□□ -0.86
RTTN-211ENST00000638251 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
RTTN-211ENST00000638251 FANCAO15360 1455 aa9.66□□□□□ -0.86
RTTN-211ENST00000638251 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
RTTN-211ENST00000638251 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
RTTN-211ENST00000638251 ZCCHC11Q5TAX3 1644 aaKnown RBP9.66□□□□□ -0.86
RTTN-211ENST00000638251 ADGRL1O94910 1474 aa9.65□□□□□ -0.86
RTTN-211ENST00000638251 AFAP1Q8N556 730 aa9.65□□□□□ -0.86
RTTN-211ENST00000638251 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.87
RTTN-211ENST00000638251 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
RTTN-211ENST00000638251 STAG3Q9UJ98 1225 aa9.64□□□□□ -0.87
RTTN-211ENST00000638251 ANP32CO43423 234 aa9.64□□□□□ -0.87
RTTN-211ENST00000638251 GGT6Q6P531 493 aa9.63□□□□□ -0.87
RTTN-211ENST00000638251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
RTTN-211ENST00000638251 SYCP2Q9BX26 1530 aa9.63□□□□□ -0.87
RTTN-211ENST00000638251 RGL3Q3MIN7 710 aa9.63□□□□□ -0.87
RTTN-211ENST00000638251 ADGRL2O95490 1459 aa9.62□□□□□ -0.87
RTTN-211ENST00000638251 MYO5CQ9NQX4 1742 aa9.62□□□□□ -0.87
RTTN-211ENST00000638251 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
RTTN-211ENST00000638251 ARID4BQ4LE39 1312 aaPredicted RBP9.62□□□□□ -0.87
RTTN-211ENST00000638251 ARHGEF5Q12774 1597 aa9.62□□□□□ -0.87
RTTN-211ENST00000638251 YTHDC1Q96MU7 727 aaKnown RBP9.61□□□□□ -0.87
RTTN-211ENST00000638251 PREX2Q70Z35 1606 aa9.61□□□□□ -0.87
RTTN-211ENST00000638251 L3MBTL2Q969R5 705 aa9.61□□□□□ -0.87
RTTN-211ENST00000638251 DCAF11Q8TEB1 546 aa9.6□□□□□ -0.87
RTTN-211ENST00000638251 ADGBQ8N7X0 1667 aa9.6□□□□□ -0.87
RTTN-211ENST00000638251 WASHC2CQ9Y4E1 1318 aa9.6□□□□□ -0.87
RTTN-211ENST00000638251 DUOX2Q9NRD8 1548 aa9.59□□□□□ -0.87
RTTN-211ENST00000638251 GCC2Q8IWJ2 1684 aa9.59□□□□□ -0.87
RTTN-211ENST00000638251 CARD11Q9BXL7 1154 aa9.59□□□□□ -0.87
RTTN-211ENST00000638251 TTC37Q6PGP7 1564 aa9.58□□□□□ -0.88
RTTN-211ENST00000638251 RTEL1-TNFRSF6BF6WH68 1400 aa9.58□□□□□ -0.88
RTTN-211ENST00000638251 ERBINQ96RT1 1412 aa9.58□□□□□ -0.88
RTTN-211ENST00000638251 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
RTTN-211ENST00000638251 CFAP74Q9C0B2 1584 aa9.58□□□□□ -0.88
RTTN-211ENST00000638251 DDX10Q13206 875 aaKnown RBP9.58□□□□□ -0.88
RTTN-211ENST00000638251 ZNF518AQ6AHZ1 1483 aa9.57□□□□□ -0.88
RTTN-211ENST00000638251 TEX14Q8IWB6 1497 aa9.57□□□□□ -0.88
RTTN-211ENST00000638251 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
RTTN-211ENST00000638251 CDC42BPAQ5VT25 1732 aa9.56□□□□□ -0.88
RTTN-211ENST00000638251 SAMD9LQ8IVG5 1584 aa9.56□□□□□ -0.88
RTTN-211ENST00000638251 MAPKBP1O60336 1514 aa9.56□□□□□ -0.88
RTTN-211ENST00000638251 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
RTTN-211ENST00000638251 BCANQ96GW7 911 aa9.55□□□□□ -0.88
RTTN-211ENST00000638251 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
RTTN-211ENST00000638251 MBD5Q9P267 1494 aa9.55□□□□□ -0.88
RTTN-211ENST00000638251 ANKRD30BQ9BXX2 1392 aa9.55□□□□□ -0.88
RTTN-211ENST00000638251 DHX29Q7Z478 1369 aaKnown RBP9.54□□□□□ -0.88
RTTN-211ENST00000638251 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
RTTN-211ENST00000638251 MLECQ14165 292 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 513.9 ms