RNA–Protein interactions for RNA: ENST00000638106.1

CHRNA7-235, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-235ENST00000638106 ARHGAP5Q13017 1502 aa24.26■■□□□ 1.47
CHRNA7-235ENST00000638106 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
CHRNA7-235ENST00000638106 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
CHRNA7-235ENST00000638106 POGZQ7Z3K3 1410 aa24.25■■□□□ 1.47
CHRNA7-235ENST00000638106 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
CHRNA7-235ENST00000638106 ZFYVE16Q7Z3T8 1539 aa24.22■■□□□ 1.47
CHRNA7-235ENST00000638106 BCORL1Q5H9F3 1711 aa24.21■■□□□ 1.47
CHRNA7-235ENST00000638106 ADAMTSL3P82987 1691 aa24.21■■□□□ 1.47
CHRNA7-235ENST00000638106 CDC42BPAQ5VT25 1732 aa24.2■■□□□ 1.46
CHRNA7-235ENST00000638106 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
CHRNA7-235ENST00000638106 ARID4BQ4LE39 1312 aaPredicted RBP24.18■■□□□ 1.46
CHRNA7-235ENST00000638106 YEATS2Q9ULM3 1422 aa24.14■■□□□ 1.45
CHRNA7-235ENST00000638106 KDM5CP41229 1560 aa24.13■■□□□ 1.45
CHRNA7-235ENST00000638106 MTUS2Q5JR59 1369 aa24.13■■□□□ 1.45
CHRNA7-235ENST00000638106 ABCC1P33527 1531 aa24.11■■□□□ 1.45
CHRNA7-235ENST00000638106 ITSN2Q9NZM3 1697 aa24.11■■□□□ 1.45
CHRNA7-235ENST00000638106 MADDQ8WXG6 1647 aa24.1■■□□□ 1.45
CHRNA7-235ENST00000638106 HECW2Q9P2P5 1572 aa24.09■■□□□ 1.45
CHRNA7-235ENST00000638106 ATP10AO60312 1499 aa24.09■■□□□ 1.45
CHRNA7-235ENST00000638106 PTPRMP28827 1452 aa24.08■■□□□ 1.45
CHRNA7-235ENST00000638106 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
CHRNA7-235ENST00000638106 EHBP1L1Q8N3D4 1523 aa24.08■■□□□ 1.45
CHRNA7-235ENST00000638106 GPATCH8Q9UKJ3 1502 aaKnown RBP24.08■■□□□ 1.45
CHRNA7-235ENST00000638106 AFAP1Q8N556 730 aa24.07■■□□□ 1.44
CHRNA7-235ENST00000638106 C9orf84Q5VXU9 1444 aa24.07■■□□□ 1.44
CHRNA7-235ENST00000638106 SIGLEC1Q9BZZ2 1709 aa24.06■■□□□ 1.44
CHRNA7-235ENST00000638106 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
CHRNA7-235ENST00000638106 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
CHRNA7-235ENST00000638106 RIMS1Q86UR5 1692 aaKnown RBP24.03■■□□□ 1.44
CHRNA7-235ENST00000638106 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
CHRNA7-235ENST00000638106 ARHGEF12Q9NZN5 1544 aa24.03■■□□□ 1.44
CHRNA7-235ENST00000638106 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
CHRNA7-235ENST00000638106 TRAPPC8Q9Y2L5 1435 aa24.01■■□□□ 1.43
CHRNA7-235ENST00000638106 PLEKHH2Q8IVE3 1493 aa24.01■■□□□ 1.43
CHRNA7-235ENST00000638106 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
CHRNA7-235ENST00000638106 REREQ9P2R6 1566 aa24■■□□□ 1.43
CHRNA7-235ENST00000638106 DIP2CQ9Y2E4 1556 aa24■■□□□ 1.43
CHRNA7-235ENST00000638106 CFDP1Q9UEE9 299 aaPredicted RBP24■■□□□ 1.43
CHRNA7-235ENST00000638106 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
CHRNA7-235ENST00000638106 FER1L4A9Z1Z3 1794 aa24■■□□□ 1.43
CHRNA7-235ENST00000638106 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
CHRNA7-235ENST00000638106 TIAM1Q13009 1591 aa23.97■■□□□ 1.43
CHRNA7-235ENST00000638106 SUPT6HQ7KZ85 1726 aaKnown RBP23.97■■□□□ 1.43
CHRNA7-235ENST00000638106 ABCA6Q8N139 1617 aa23.97■■□□□ 1.43
CHRNA7-235ENST00000638106 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
CHRNA7-235ENST00000638106 KIDINS220Q9ULH0 1771 aa23.97■■□□□ 1.43
CHRNA7-235ENST00000638106 MLECQ14165 292 aa23.94■■□□□ 1.42
CHRNA7-235ENST00000638106 AGLP35573 1532 aa23.91■■□□□ 1.42
CHRNA7-235ENST00000638106 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.42
CHRNA7-235ENST00000638106 MAP3K1Q13233 1512 aa23.89■■□□□ 1.42
CHRNA7-235ENST00000638106 SPAG9O60271 1321 aaKnown RBP23.89■■□□□ 1.42
CHRNA7-235ENST00000638106 NCOA2Q15596 1464 aa23.88■■□□□ 1.41
CHRNA7-235ENST00000638106 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
CHRNA7-235ENST00000638106 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
CHRNA7-235ENST00000638106 INO80Q9ULG1 1556 aaPredicted RBP23.85■■□□□ 1.41
CHRNA7-235ENST00000638106 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
CHRNA7-235ENST00000638106 ZNF644Q9H582 1327 aaPredicted RBP23.81■■□□□ 1.4
CHRNA7-235ENST00000638106 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
CHRNA7-235ENST00000638106 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
CHRNA7-235ENST00000638106 ADGBQ8N7X0 1667 aa23.79■■□□□ 1.4
CHRNA7-235ENST00000638106 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
CHRNA7-235ENST00000638106 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CHRNA7-235ENST00000638106 ESF1Q9H501 851 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-235ENST00000638106 RTEL1-TNFRSF6BF6WH68 1400 aa23.77■■□□□ 1.4
CHRNA7-235ENST00000638106 CAMSAP2Q08AD1 1489 aa23.77■■□□□ 1.4
CHRNA7-235ENST00000638106 A2MP01023 1474 aa23.76■■□□□ 1.39
CHRNA7-235ENST00000638106 PLXNC1O60486 1568 aa23.76■■□□□ 1.39
CHRNA7-235ENST00000638106 CNTLNQ9NXG0 1405 aa23.76■■□□□ 1.39
CHRNA7-235ENST00000638106 APLP2Q06481 763 aa23.75■■□□□ 1.39
CHRNA7-235ENST00000638106 PREX1Q8TCU6 1659 aa23.75■■□□□ 1.39
CHRNA7-235ENST00000638106 CCDC141Q6ZP82 1450 aa23.75■■□□□ 1.39
CHRNA7-235ENST00000638106 C3P01024 1663 aa23.73■■□□□ 1.39
CHRNA7-235ENST00000638106 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
CHRNA7-235ENST00000638106 ARHGEF5Q12774 1597 aa23.72■■□□□ 1.39
CHRNA7-235ENST00000638106 MROH2AA6NES4 1674 aa23.7■■□□□ 1.39
CHRNA7-235ENST00000638106 CEBPAP49715 358 aaPredicted RBP23.69■■□□□ 1.38
CHRNA7-235ENST00000638106 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
CHRNA7-235ENST00000638106 MIA2Q96PC5 1412 aa23.68■■□□□ 1.38
CHRNA7-235ENST00000638106 TSPY4P0CV99 314 aa23.66■■□□□ 1.38
CHRNA7-235ENST00000638106 TSPY10P0CW01 314 aa23.66■■□□□ 1.38
CHRNA7-235ENST00000638106 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
CHRNA7-235ENST00000638106 DHX29Q7Z478 1369 aaKnown RBP23.65■■□□□ 1.38
CHRNA7-235ENST00000638106 UHRF1BP1Q6BDS2 1440 aa23.64■■□□□ 1.37
CHRNA7-235ENST00000638106 HSPA2P54652 639 aa23.62■■□□□ 1.37
CHRNA7-235ENST00000638106 CLTCQ00610 1675 aaKnown RBP23.62■■□□□ 1.37
CHRNA7-235ENST00000638106 GGT6Q6P531 493 aa23.6■■□□□ 1.37
CHRNA7-235ENST00000638106 MAST1Q9Y2H9 1570 aa23.6■■□□□ 1.37
CHRNA7-235ENST00000638106 ZMYM3Q14202 1370 aa23.59■■□□□ 1.37
CHRNA7-235ENST00000638106 NPATQ14207 1427 aa23.59■■□□□ 1.37
CHRNA7-235ENST00000638106 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
CHRNA7-235ENST00000638106 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
CHRNA7-235ENST00000638106 KIF3BO15066 747 aa23.53■■□□□ 1.36
CHRNA7-235ENST00000638106 CROCC2H7BZ55 1655 aa23.5■■□□□ 1.35
CHRNA7-235ENST00000638106 STRCQ7RTU9 1775 aa23.49■■□□□ 1.35
CHRNA7-235ENST00000638106 FGD6Q6ZV73 1430 aa23.49■■□□□ 1.35
CHRNA7-235ENST00000638106 KDM5DQ9BY66 1539 aa23.49■■□□□ 1.35
CHRNA7-235ENST00000638106 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
CHRNA7-235ENST00000638106 DMRT2Q9Y5R5 561 aa23.48■■□□□ 1.35
CHRNA7-235ENST00000638106 PTPRKQ15262 1439 aa23.48■■□□□ 1.35
CHRNA7-235ENST00000638106 SHANK2Q9UPX8 1470 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms