RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
MECP2-225ENST00000638041 PLEKHH2Q8IVE3 1493 aa11.12□□□□□ -0.63
MECP2-225ENST00000638041 RAPGEF3O95398 923 aa11.12□□□□□ -0.63
MECP2-225ENST00000638041 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
MECP2-225ENST00000638041 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
MECP2-225ENST00000638041 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
MECP2-225ENST00000638041 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
MECP2-225ENST00000638041 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
MECP2-225ENST00000638041 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
MECP2-225ENST00000638041 EHBP1L1Q8N3D4 1523 aa11.09□□□□□ -0.63
MECP2-225ENST00000638041 VPS8Q8N3P4 1428 aa11.08□□□□□ -0.64
MECP2-225ENST00000638041 COL17A1Q9UMD9 1497 aaPredicted RBP11.07□□□□□ -0.64
MECP2-225ENST00000638041 ZFYVE16Q7Z3T8 1539 aa11.07□□□□□ -0.64
MECP2-225ENST00000638041 ITSN2Q9NZM3 1697 aa11.06□□□□□ -0.64
MECP2-225ENST00000638041 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
MECP2-225ENST00000638041 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
MECP2-225ENST00000638041 TSPY4P0CV99 314 aa11.05□□□□□ -0.64
MECP2-225ENST00000638041 TSPY10P0CW01 314 aa11.05□□□□□ -0.64
MECP2-225ENST00000638041 PREX2Q70Z35 1606 aa11.05□□□□□ -0.64
MECP2-225ENST00000638041 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
MECP2-225ENST00000638041 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
MECP2-225ENST00000638041 ATP10AO60312 1499 aa11.04□□□□□ -0.64
MECP2-225ENST00000638041 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
MECP2-225ENST00000638041 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
MECP2-225ENST00000638041 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
MECP2-225ENST00000638041 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
MECP2-225ENST00000638041 ARHGEF40Q8TER5 1519 aa11.03□□□□□ -0.64
MECP2-225ENST00000638041 KIAA1107Q9UPP5 1409 aa11.02□□□□□ -0.64
MECP2-225ENST00000638041 PLPPR3Q6T4P5 718 aa11.02□□□□□ -0.65
MECP2-225ENST00000638041 HECW2Q9P2P5 1572 aa11□□□□□ -0.65
MECP2-225ENST00000638041 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
MECP2-225ENST00000638041 GPATCH8Q9UKJ3 1502 aaKnown RBP10.99□□□□□ -0.65
MECP2-225ENST00000638041 LRRIQ1Q96JM4 1722 aa10.99□□□□□ -0.65
MECP2-225ENST00000638041 CDC42BPBQ9Y5S2 1711 aa10.99□□□□□ -0.65
MECP2-225ENST00000638041 AFAP1Q8N556 730 aa10.99□□□□□ -0.65
MECP2-225ENST00000638041 PPP6R1Q9UPN7 881 aa10.99□□□□□ -0.65
MECP2-225ENST00000638041 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
MECP2-225ENST00000638041 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
MECP2-225ENST00000638041 MLECQ14165 292 aa10.98□□□□□ -0.65
MECP2-225ENST00000638041 ABCC1P33527 1531 aa10.98□□□□□ -0.65
MECP2-225ENST00000638041 BCORL1Q5H9F3 1711 aa10.96□□□□□ -0.65
MECP2-225ENST00000638041 KDM5CP41229 1560 aa10.96□□□□□ -0.65
MECP2-225ENST00000638041 FRMPD1Q5SYB0 1578 aa10.96□□□□□ -0.65
MECP2-225ENST00000638041 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
MECP2-225ENST00000638041 CNTLNQ9NXG0 1405 aa10.96□□□□□ -0.65
MECP2-225ENST00000638041 HNRNPMP52272 730 aaKnown RBP eCLIP10.96□□□□□ -0.65
MECP2-225ENST00000638041 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
MECP2-225ENST00000638041 MIA2Q96PC5 1412 aa10.95□□□□□ -0.66
MECP2-225ENST00000638041 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
MECP2-225ENST00000638041 RTEL1-TNFRSF6BF6WH68 1400 aa10.94□□□□□ -0.66
MECP2-225ENST00000638041 FOXD1Q16676 465 aa10.94□□□□□ -0.66
MECP2-225ENST00000638041 PTPRMP28827 1452 aa10.93□□□□□ -0.66
MECP2-225ENST00000638041 DMRT2Q9Y5R5 561 aa10.93□□□□□ -0.66
MECP2-225ENST00000638041 SYCP2Q9BX26 1530 aa10.93□□□□□ -0.66
MECP2-225ENST00000638041 YEATS2Q9ULM3 1422 aa10.92□□□□□ -0.66
MECP2-225ENST00000638041 CCDC141Q6ZP82 1450 aa10.92□□□□□ -0.66
MECP2-225ENST00000638041 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
MECP2-225ENST00000638041 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
MECP2-225ENST00000638041 SAMD9LQ8IVG5 1584 aa10.91□□□□□ -0.66
MECP2-225ENST00000638041 AGLP35573 1532 aa10.91□□□□□ -0.66
MECP2-225ENST00000638041 ATP7AQ04656 1500 aa10.91□□□□□ -0.66
MECP2-225ENST00000638041 TRAPPC8Q9Y2L5 1435 aa10.91□□□□□ -0.66
MECP2-225ENST00000638041 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
MECP2-225ENST00000638041 ADGBQ8N7X0 1667 aa10.9□□□□□ -0.66
MECP2-225ENST00000638041 RIMS1Q86UR5 1692 aaKnown RBP10.89□□□□□ -0.67
MECP2-225ENST00000638041 A2MP01023 1474 aa10.89□□□□□ -0.67
MECP2-225ENST00000638041 CAMSAP2Q08AD1 1489 aa10.89□□□□□ -0.67
MECP2-225ENST00000638041 MADDQ8WXG6 1647 aa10.89□□□□□ -0.67
MECP2-225ENST00000638041 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
MECP2-225ENST00000638041 GGT6Q6P531 493 aa10.88□□□□□ -0.67
MECP2-225ENST00000638041 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
MECP2-225ENST00000638041 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
MECP2-225ENST00000638041 ARHGEF12Q9NZN5 1544 aa10.86□□□□□ -0.67
MECP2-225ENST00000638041 FAM135AQ9P2D6 1515 aa10.86□□□□□ -0.67
MECP2-225ENST00000638041 KANK1Q14678 1352 aa10.86□□□□□ -0.67
MECP2-225ENST00000638041 DHX29Q7Z478 1369 aaKnown RBP10.86□□□□□ -0.67
MECP2-225ENST00000638041 WASHC2CQ9Y4E1 1318 aa10.85□□□□□ -0.67
MECP2-225ENST00000638041 KIDINS220Q9ULH0 1771 aa10.85□□□□□ -0.67
MECP2-225ENST00000638041 ABCA6Q8N139 1617 aa10.85□□□□□ -0.67
MECP2-225ENST00000638041 KIF3BO15066 747 aa10.85□□□□□ -0.67
MECP2-225ENST00000638041 INO80Q9ULG1 1556 aaPredicted RBP10.84□□□□□ -0.67
MECP2-225ENST00000638041 SETD1BQ9UPS6 1966 aaKnown RBP10.84□□□□□ -0.67
MECP2-225ENST00000638041 ANKRD30AQ9BXX3 1397 aa10.83□□□□□ -0.68
MECP2-225ENST00000638041 FAM50AQ14320 339 aaKnown RBP10.83□□□□□ -0.68
MECP2-225ENST00000638041 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
MECP2-225ENST00000638041 ZNF644Q9H582 1327 aaPredicted RBP10.83□□□□□ -0.68
MECP2-225ENST00000638041 MBD5Q9P267 1494 aa10.82□□□□□ -0.68
MECP2-225ENST00000638041 MROH2AA6NES4 1674 aa10.81□□□□□ -0.68
MECP2-225ENST00000638041 PREX1Q8TCU6 1659 aa10.81□□□□□ -0.68
MECP2-225ENST00000638041 NPATQ14207 1427 aa10.81□□□□□ -0.68
MECP2-225ENST00000638041 PTPN23Q9H3S7 1636 aa10.8□□□□□ -0.68
MECP2-225ENST00000638041 ZMYM3Q14202 1370 aa10.8□□□□□ -0.68
MECP2-225ENST00000638041 FGD6Q6ZV73 1430 aa10.8□□□□□ -0.68
MECP2-225ENST00000638041 SHANK2Q9UPX8 1470 aa10.8□□□□□ -0.68
MECP2-225ENST00000638041 DUOX2Q9NRD8 1548 aa10.79□□□□□ -0.68
MECP2-225ENST00000638041 MAST1Q9Y2H9 1570 aa10.79□□□□□ -0.68
MECP2-225ENST00000638041 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
MECP2-225ENST00000638041 PLXNC1O60486 1568 aa10.77□□□□□ -0.68
MECP2-225ENST00000638041 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.68
MECP2-225ENST00000638041 ERBINQ96RT1 1412 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms