RNA–Protein interactions for RNA: ENST00000637966.1

CACNA1A-255, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,887 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-255ENST00000637966 CAMSAP2Q08AD1 1489 aa18.47■□□□□ 0.55
CACNA1A-255ENST00000637966 PTPRKQ15262 1439 aa18.47■□□□□ 0.55
CACNA1A-255ENST00000637966 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-255ENST00000637966 MYO5CQ9NQX4 1742 aa18.46■□□□□ 0.55
CACNA1A-255ENST00000637966 PLCH2O75038 1416 aa18.45■□□□□ 0.54
CACNA1A-255ENST00000637966 ABCA9Q8IUA7 1624 aa18.42■□□□□ 0.54
CACNA1A-255ENST00000637966 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
CACNA1A-255ENST00000637966 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-255ENST00000637966 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
CACNA1A-255ENST00000637966 ABCC5O15440 1437 aa18.41■□□□□ 0.54
CACNA1A-255ENST00000637966 DAPK1P53355 1430 aa18.41■□□□□ 0.54
CACNA1A-255ENST00000637966 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
CACNA1A-255ENST00000637966 EFCAB2Q5VUJ9 269 aa18.4■□□□□ 0.54
CACNA1A-255ENST00000637966 CHIC2Q9UKJ5 165 aa18.39■□□□□ 0.54
CACNA1A-255ENST00000637966 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
CACNA1A-255ENST00000637966 ARAP3Q8WWN8 1544 aa18.38■□□□□ 0.53
CACNA1A-255ENST00000637966 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
CACNA1A-255ENST00000637966 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
CACNA1A-255ENST00000637966 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
CACNA1A-255ENST00000637966 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
CACNA1A-255ENST00000637966 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
CACNA1A-255ENST00000637966 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
CACNA1A-255ENST00000637966 PLEKHH2Q8IVE3 1493 aa18.35■□□□□ 0.53
CACNA1A-255ENST00000637966 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
CACNA1A-255ENST00000637966 ARHGEF5Q12774 1597 aa18.34■□□□□ 0.53
CACNA1A-255ENST00000637966 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
CACNA1A-255ENST00000637966 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
CACNA1A-255ENST00000637966 NAIPQ13075 1403 aa18.33■□□□□ 0.53
CACNA1A-255ENST00000637966 ROCK1Q13464 1354 aa18.33■□□□□ 0.52
CACNA1A-255ENST00000637966 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
CACNA1A-255ENST00000637966 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
CACNA1A-255ENST00000637966 TSPY4P0CV99 314 aa18.31■□□□□ 0.52
CACNA1A-255ENST00000637966 TSPY10P0CW01 314 aa18.31■□□□□ 0.52
CACNA1A-255ENST00000637966 FANCAO15360 1455 aa18.3■□□□□ 0.52
CACNA1A-255ENST00000637966 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
CACNA1A-255ENST00000637966 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
CACNA1A-255ENST00000637966 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
CACNA1A-255ENST00000637966 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
CACNA1A-255ENST00000637966 GLI2P10070 1586 aa18.28■□□□□ 0.52
CACNA1A-255ENST00000637966 NCOA1Q15788 1441 aa18.28■□□□□ 0.52
CACNA1A-255ENST00000637966 ADGRL2O95490 1459 aa18.27■□□□□ 0.52
CACNA1A-255ENST00000637966 ABCC1P33527 1531 aa18.27■□□□□ 0.52
CACNA1A-255ENST00000637966 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.52
CACNA1A-255ENST00000637966 C9orf84Q5VXU9 1444 aa18.27■□□□□ 0.52
CACNA1A-255ENST00000637966 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.51
CACNA1A-255ENST00000637966 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
CACNA1A-255ENST00000637966 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
CACNA1A-255ENST00000637966 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
CACNA1A-255ENST00000637966 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-255ENST00000637966 MAP3K4Q9Y6R4 1608 aa18.24■□□□□ 0.51
CACNA1A-255ENST00000637966 DIP2BQ9P265 1576 aa18.23■□□□□ 0.51
CACNA1A-255ENST00000637966 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
CACNA1A-255ENST00000637966 SCAPERQ9BY12 1400 aa18.22■□□□□ 0.51
CACNA1A-255ENST00000637966 ADGRL1O94910 1474 aa18.22■□□□□ 0.51
CACNA1A-255ENST00000637966 CFAP74Q9C0B2 1584 aa18.22■□□□□ 0.51
CACNA1A-255ENST00000637966 MAST1Q9Y2H9 1570 aa18.22■□□□□ 0.51
CACNA1A-255ENST00000637966 KDM6BO15054 1643 aa18.2■□□□□ 0.5
CACNA1A-255ENST00000637966 AFAP1Q8N556 730 aa18.2■□□□□ 0.5
CACNA1A-255ENST00000637966 NEO1Q92859 1461 aa18.19■□□□□ 0.5
CACNA1A-255ENST00000637966 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-255ENST00000637966 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
CACNA1A-255ENST00000637966 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
CACNA1A-255ENST00000637966 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-255ENST00000637966 RTEL1-TNFRSF6BF6WH68 1400 aa18.15■□□□□ 0.5
CACNA1A-255ENST00000637966 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
CACNA1A-255ENST00000637966 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
CACNA1A-255ENST00000637966 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.49
CACNA1A-255ENST00000637966 PLXNC1O60486 1568 aa18.13■□□□□ 0.49
CACNA1A-255ENST00000637966 TSPOAP1O95153 1857 aa18.11■□□□□ 0.49
CACNA1A-255ENST00000637966 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
CACNA1A-255ENST00000637966 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-255ENST00000637966 POGZQ7Z3K3 1410 aa18.09■□□□□ 0.49
CACNA1A-255ENST00000637966 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
CACNA1A-255ENST00000637966 DENND4BO75064 1496 aaPredicted RBP18.09■□□□□ 0.49
CACNA1A-255ENST00000637966 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
CACNA1A-255ENST00000637966 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.49
CACNA1A-255ENST00000637966 ATP7AQ04656 1500 aa18.08■□□□□ 0.48
CACNA1A-255ENST00000637966 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
CACNA1A-255ENST00000637966 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.48
CACNA1A-255ENST00000637966 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
CACNA1A-255ENST00000637966 KDM5CP41229 1560 aa18.06■□□□□ 0.48
CACNA1A-255ENST00000637966 RAPGEF3O95398 923 aa18.06■□□□□ 0.48
CACNA1A-255ENST00000637966 MLH3Q9UHC1 1453 aa18.04■□□□□ 0.48
CACNA1A-255ENST00000637966 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
CACNA1A-255ENST00000637966 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
CACNA1A-255ENST00000637966 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
CACNA1A-255ENST00000637966 NUP155O75694 1391 aa18.01■□□□□ 0.47
CACNA1A-255ENST00000637966 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-255ENST00000637966 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
CACNA1A-255ENST00000637966 PZPP20742 1482 aa18■□□□□ 0.47
CACNA1A-255ENST00000637966 DHX29Q7Z478 1369 aaKnown RBP18■□□□□ 0.47
CACNA1A-255ENST00000637966 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
CACNA1A-255ENST00000637966 SIN3AQ96ST3 1273 aa17.97■□□□□ 0.47
CACNA1A-255ENST00000637966 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-255ENST00000637966 UNC13BO14795 1591 aa17.96■□□□□ 0.47
CACNA1A-255ENST00000637966 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.47
CACNA1A-255ENST00000637966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.47
CACNA1A-255ENST00000637966 FOXD1Q16676 465 aa17.95■□□□□ 0.46
CACNA1A-255ENST00000637966 A2MP01023 1474 aa17.95■□□□□ 0.46
CACNA1A-255ENST00000637966 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms