RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 NEO1Q92859 1461 aa34.79■■■■□ 3.16
CHRNA7-231ENST00000637786 FANCAO15360 1455 aa34.78■■■■□ 3.16
CHRNA7-231ENST00000637786 PHLDB1Q86UU1 1377 aa34.77■■■■□ 3.16
CHRNA7-231ENST00000637786 ARHGAP5Q13017 1502 aa34.76■■■■□ 3.15
CHRNA7-231ENST00000637786 EFCAB2Q5VUJ9 269 aa34.73■■■■□ 3.15
CHRNA7-231ENST00000637786 MYOM3Q5VTT5 1437 aa34.69■■■■□ 3.14
CHRNA7-231ENST00000637786 CFDP1Q9UEE9 299 aaPredicted RBP34.67■■■■□ 3.14
CHRNA7-231ENST00000637786 AKNAQ7Z591 1439 aa34.66■■■■□ 3.14
CHRNA7-231ENST00000637786 MIA2Q96PC5 1412 aa34.64■■■■□ 3.14
CHRNA7-231ENST00000637786 PPARGC1BQ86YN6 1023 aaKnown RBP34.6■■■■□ 3.13
CHRNA7-231ENST00000637786 SAMD9LQ8IVG5 1584 aa34.6■■■■□ 3.13
CHRNA7-231ENST00000637786 ADGRL1O94910 1474 aa34.58■■■■□ 3.13
CHRNA7-231ENST00000637786 KDM6BO15054 1643 aa34.58■■■■□ 3.13
CHRNA7-231ENST00000637786 PLEKHH2Q8IVE3 1493 aa34.58■■■■□ 3.13
CHRNA7-231ENST00000637786 ABCC1P33527 1531 aa34.57■■■■□ 3.12
CHRNA7-231ENST00000637786 FGD6Q6ZV73 1430 aa34.54■■■■□ 3.12
CHRNA7-231ENST00000637786 KIAA1107Q9UPP5 1409 aa34.54■■■■□ 3.12
CHRNA7-231ENST00000637786 COL17A1Q9UMD9 1497 aaPredicted RBP34.53■■■■□ 3.12
CHRNA7-231ENST00000637786 ZNF777Q9ULD5 760 aaPredicted RBP34.53■■■■□ 3.12
CHRNA7-231ENST00000637786 SCAPERQ9BY12 1400 aa34.52■■■■□ 3.12
CHRNA7-231ENST00000637786 DENND4BO75064 1496 aaPredicted RBP34.52■■■■□ 3.12
CHRNA7-231ENST00000637786 CAMSAP2Q08AD1 1489 aa34.51■■■■□ 3.11
CHRNA7-231ENST00000637786 PTPN23Q9H3S7 1636 aa34.48■■■■□ 3.11
CHRNA7-231ENST00000637786 RICTORQ6R327 1708 aa34.47■■■■□ 3.11
CHRNA7-231ENST00000637786 SYCP2Q9BX26 1530 aa34.47■■■■□ 3.11
CHRNA7-231ENST00000637786 ZNF644Q9H582 1327 aaPredicted RBP34.47■■■■□ 3.11
CHRNA7-231ENST00000637786 TCOF1Q13428 1488 aaKnown RBP34.46■■■■□ 3.11
CHRNA7-231ENST00000637786 ARHGEF12Q9NZN5 1544 aa34.46■■■■□ 3.11
CHRNA7-231ENST00000637786 POGZQ7Z3K3 1410 aa34.46■■■■□ 3.11
CHRNA7-231ENST00000637786 ZNF518AQ6AHZ1 1483 aa34.43■■■■□ 3.1
CHRNA7-231ENST00000637786 FRMPD1Q5SYB0 1578 aa34.43■■■■□ 3.1
CHRNA7-231ENST00000637786 MBD5Q9P267 1494 aa34.41■■■■□ 3.1
CHRNA7-231ENST00000637786 RAPGEF3O95398 923 aa34.39■■■■□ 3.1
CHRNA7-231ENST00000637786 ARHGEF5Q12774 1597 aa34.39■■■■□ 3.1
CHRNA7-231ENST00000637786 KDM5CP41229 1560 aa34.38■■■■□ 3.09
CHRNA7-231ENST00000637786 TRAPPC8Q9Y2L5 1435 aa34.38■■■■□ 3.09
CHRNA7-231ENST00000637786 ZMYM4Q5VZL5 1548 aa34.37■■■■□ 3.09
CHRNA7-231ENST00000637786 HNRNPMP52272 730 aaKnown RBP eCLIP34.37■■■■□ 3.09
CHRNA7-231ENST00000637786 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
CHRNA7-231ENST00000637786 RRBP1Q9P2E9 1410 aaKnown RBP34.35■■■■□ 3.09
CHRNA7-231ENST00000637786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.33■■■■□ 3.09
CHRNA7-231ENST00000637786 CCDC141Q6ZP82 1450 aa34.33■■■■□ 3.09
CHRNA7-231ENST00000637786 AFAP1Q8N556 730 aa34.31■■■■□ 3.08
CHRNA7-231ENST00000637786 MAGI2Q86UL8 1455 aa34.29■■■■□ 3.08
CHRNA7-231ENST00000637786 DNMT1P26358 1616 aaKnown RBP34.27■■■■□ 3.08
CHRNA7-231ENST00000637786 MLH3Q9UHC1 1453 aa34.27■■■■□ 3.08
CHRNA7-231ENST00000637786 FAM50AQ14320 339 aaKnown RBP34.26■■■■□ 3.08
CHRNA7-231ENST00000637786 HECW2Q9P2P5 1572 aa34.26■■■■□ 3.07
CHRNA7-231ENST00000637786 CROCC2H7BZ55 1655 aa34.22■■■■□ 3.07
CHRNA7-231ENST00000637786 INO80Q9ULG1 1556 aaPredicted RBP34.21■■■■□ 3.07
CHRNA7-231ENST00000637786 SPAG9O60271 1321 aaKnown RBP34.21■■■■□ 3.07
CHRNA7-231ENST00000637786 ABCC5O15440 1437 aa34.21■■■■□ 3.07
CHRNA7-231ENST00000637786 DAPK1P53355 1430 aa34.21■■■■□ 3.07
CHRNA7-231ENST00000637786 RTEL1-TNFRSF6BF6WH68 1400 aa34.2■■■■□ 3.06
CHRNA7-231ENST00000637786 SHANK2Q9UPX8 1470 aa34.2■■■■□ 3.06
CHRNA7-231ENST00000637786 ZFYVE16Q7Z3T8 1539 aa34.2■■■■□ 3.06
CHRNA7-231ENST00000637786 MAST1Q9Y2H9 1570 aa34.19■■■■□ 3.06
CHRNA7-231ENST00000637786 KIDINS220Q9ULH0 1771 aa34.19■■■■□ 3.06
CHRNA7-231ENST00000637786 ATP7AQ04656 1500 aa34.19■■■■□ 3.06
CHRNA7-231ENST00000637786 TSPY4P0CV99 314 aa34.18■■■■□ 3.06
CHRNA7-231ENST00000637786 TSPY10P0CW01 314 aa34.18■■■■□ 3.06
CHRNA7-231ENST00000637786 ARHGEF40Q8TER5 1519 aa34.18■■■■□ 3.06
CHRNA7-231ENST00000637786 C9orf84Q5VXU9 1444 aa34.13■■■■□ 3.05
CHRNA7-231ENST00000637786 YEATS2Q9ULM3 1422 aa34.13■■■■□ 3.05
CHRNA7-231ENST00000637786 ABCA6Q8N139 1617 aa34.1■■■■□ 3.05
CHRNA7-231ENST00000637786 DIP2CQ9Y2E4 1556 aa34.1■■■■□ 3.05
CHRNA7-231ENST00000637786 MYT1LQ9UL68 1186 aa34.09■■■■□ 3.05
CHRNA7-231ENST00000637786 ATP10AO60312 1499 aa34.07■■■■□ 3.04
CHRNA7-231ENST00000637786 PLXNC1O60486 1568 aa34.06■■■■□ 3.04
CHRNA7-231ENST00000637786 ADGBQ8N7X0 1667 aa34.04■■■■□ 3.04
CHRNA7-231ENST00000637786 REREQ9P2R6 1566 aa34.04■■■■□ 3.04
CHRNA7-231ENST00000637786 ADGRL2O95490 1459 aa34.03■■■■□ 3.04
CHRNA7-231ENST00000637786 PTPRKQ15262 1439 aa34.02■■■■□ 3.04
CHRNA7-231ENST00000637786 ANKRD30AQ9BXX3 1397 aa33.98■■■■□ 3.03
CHRNA7-231ENST00000637786 NCOA1Q15788 1441 aa33.97■■■■□ 3.03
CHRNA7-231ENST00000637786 ROCK1Q13464 1354 aa33.97■■■■□ 3.03
CHRNA7-231ENST00000637786 A2MP01023 1474 aa33.95■■■■□ 3.03
CHRNA7-231ENST00000637786 ITGAEP38570 1179 aa33.95■■■■□ 3.03
CHRNA7-231ENST00000637786 CHIC2Q9UKJ5 165 aa33.95■■■■□ 3.03
CHRNA7-231ENST00000637786 AGLP35573 1532 aa33.91■■■■□ 3.02
CHRNA7-231ENST00000637786 DUOX2Q9NRD8 1548 aa33.91■■■■□ 3.02
CHRNA7-231ENST00000637786 DHX29Q7Z478 1369 aaKnown RBP33.91■■■■□ 3.02
CHRNA7-231ENST00000637786 KIF15Q9NS87 1388 aa33.91■■■■□ 3.02
CHRNA7-231ENST00000637786 SIGLEC1Q9BZZ2 1709 aa33.88■■■■□ 3.01
CHRNA7-231ENST00000637786 RRP7BPQ9NSQ0 103 aa33.86■■■■□ 3.01
CHRNA7-231ENST00000637786 BCORL1Q5H9F3 1711 aa33.83■■■■□ 3.01
CHRNA7-231ENST00000637786 ERBINQ96RT1 1412 aa33.82■■■■□ 3
CHRNA7-231ENST00000637786 EIF2AK4Q9P2K8 1649 aaKnown RBP33.82■■■■□ 3
CHRNA7-231ENST00000637786 ARID4BQ4LE39 1312 aaPredicted RBP33.78■■■■□ 3
CHRNA7-231ENST00000637786 HFM1A2PYH4 1435 aa33.76■■■□□ 2.99
CHRNA7-231ENST00000637786 GCC2Q8IWJ2 1684 aa33.75■■■□□ 2.99
CHRNA7-231ENST00000637786 ANKRD50Q9ULJ7 1429 aa33.75■■■□□ 2.99
CHRNA7-231ENST00000637786 TRIM26Q12899 539 aaPredicted RBP33.73■■■□□ 2.99
CHRNA7-231ENST00000637786 NAIPQ13075 1403 aa33.72■■■□□ 2.99
CHRNA7-231ENST00000637786 RNF17Q9BXT8 1623 aaKnown RBP33.71■■■□□ 2.99
CHRNA7-231ENST00000637786 KIF3BO15066 747 aa33.69■■■□□ 2.98
CHRNA7-231ENST00000637786 ADAMTSL3P82987 1691 aa33.65■■■□□ 2.98
CHRNA7-231ENST00000637786 DEPDC5O75140 1603 aa33.64■■■□□ 2.98
CHRNA7-231ENST00000637786 PPP6R1Q9UPN7 881 aa33.63■■■□□ 2.97
CHRNA7-231ENST00000637786 FAM135AQ9P2D6 1515 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms