RNA–Protein interactions for RNA: ENST00000637534.1

AP003399.1-201, humanhuman

BASIC

Gene AP003399.1, Length 361 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003399.1-201ENST00000637534 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
AP003399.1-201ENST00000637534 HS3ST6Q96QI5 342 aa14.29□□□□□ -0.12
AP003399.1-201ENST00000637534 HOXB1P14653 301 aaPredicted RBP14.27□□□□□ -0.13
AP003399.1-201ENST00000637534 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
AP003399.1-201ENST00000637534 HS6ST3Q8IZP7 471 aa14.23□□□□□ -0.13
AP003399.1-201ENST00000637534 PPP1R37O75864 691 aa14.2□□□□□ -0.14
AP003399.1-201ENST00000637534 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
AP003399.1-201ENST00000637534 C2orf72A6NCS6 295 aa14.17□□□□□ -0.14
AP003399.1-201ENST00000637534 KIF3CO14782 793 aa14.17□□□□□ -0.14
AP003399.1-201ENST00000637534 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
AP003399.1-201ENST00000637534 KRTAP3-3Q9BYR6 98 aa14.17□□□□□ -0.14
AP003399.1-201ENST00000637534 KRTAP3-2Q9BYR7 98 aa14.17□□□□□ -0.14
AP003399.1-201ENST00000637534 GPR153Q6NV75 609 aa14.16□□□□□ -0.14
AP003399.1-201ENST00000637534 ERBB3P21860 1342 aa14.15□□□□□ -0.14
AP003399.1-201ENST00000637534 SPNS2Q8IVW8 549 aa14.13□□□□□ -0.15
AP003399.1-201ENST00000637534 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
AP003399.1-201ENST00000637534 VARS2Q5ST30 1063 aaKnown RBP14.1□□□□□ -0.15
AP003399.1-201ENST00000637534 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
AP003399.1-201ENST00000637534 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.16
AP003399.1-201ENST00000637534 MMRN1Q13201 1228 aa14.07□□□□□ -0.16
AP003399.1-201ENST00000637534 NKX1-1Q15270 411 aaPredicted RBP14.07□□□□□ -0.16
AP003399.1-201ENST00000637534 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
AP003399.1-201ENST00000637534 SLC34A2O95436 690 aa13.97□□□□□ -0.17
AP003399.1-201ENST00000637534 ZNF687Q8N1G0 1237 aa13.97□□□□□ -0.17
AP003399.1-201ENST00000637534 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
AP003399.1-201ENST00000637534 NUDT7P0C024 238 aa13.96□□□□□ -0.17
AP003399.1-201ENST00000637534 PCDHGA4Q9Y5G9 962 aa13.96□□□□□ -0.17
AP003399.1-201ENST00000637534 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
AP003399.1-201ENST00000637534 FOXK1P85037 733 aa13.91□□□□□ -0.18
AP003399.1-201ENST00000637534 RYDENQ9NUL5 291 aaKnown RBP13.91□□□□□ -0.18
AP003399.1-201ENST00000637534 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
AP003399.1-201ENST00000637534 PLPP6Q8IY26 295 aa13.9□□□□□ -0.18
AP003399.1-201ENST00000637534 DSG2Q14126 1118 aa13.89□□□□□ -0.19
AP003399.1-201ENST00000637534 LHX6Q9UPM6 363 aa13.88□□□□□ -0.19
AP003399.1-201ENST00000637534 GTPBP6O43824 516 aaPredicted RBP13.85□□□□□ -0.19
AP003399.1-201ENST00000637534 PTCD2Q8WV60 388 aaKnown RBP13.84□□□□□ -0.19
AP003399.1-201ENST00000637534 CRISPLD2Q9H0B8 497 aa13.81□□□□□ -0.2
AP003399.1-201ENST00000637534 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
AP003399.1-201ENST00000637534 POTEEQ6S8J3 1075 aa13.77□□□□□ -0.21
AP003399.1-201ENST00000637534 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
AP003399.1-201ENST00000637534 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.21
AP003399.1-201ENST00000637534 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
AP003399.1-201ENST00000637534 AXIN2Q9Y2T1 843 aa13.75□□□□□ -0.21
AP003399.1-201ENST00000637534 PBX2P40425 430 aa13.73□□□□□ -0.21
AP003399.1-201ENST00000637534 PPP1R15BQ5SWA1 713 aa13.73□□□□□ -0.21
AP003399.1-201ENST00000637534 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
AP003399.1-201ENST00000637534 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
AP003399.1-201ENST00000637534 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP003399.1-201ENST00000637534 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
AP003399.1-201ENST00000637534 TBC1D12O60347 775 aa13.7□□□□□ -0.22
AP003399.1-201ENST00000637534 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
AP003399.1-201ENST00000637534 PDE4AP27815 886 aa13.69□□□□□ -0.22
AP003399.1-201ENST00000637534 PTGER2P43116 358 aa13.67□□□□□ -0.22
AP003399.1-201ENST00000637534 LARP6Q9BRS8 491 aaKnown RBP13.66□□□□□ -0.22
AP003399.1-201ENST00000637534 ARHGAP33O14559 1287 aa13.63□□□□□ -0.23
AP003399.1-201ENST00000637534 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
AP003399.1-201ENST00000637534 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
AP003399.1-201ENST00000637534 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
AP003399.1-201ENST00000637534 PSEN2P49810 448 aa13.6□□□□□ -0.23
AP003399.1-201ENST00000637534 MFSD10Q14728 455 aa13.6□□□□□ -0.23
AP003399.1-201ENST00000637534 DMRTA1Q5VZB9 504 aa13.59□□□□□ -0.23
AP003399.1-201ENST00000637534 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
AP003399.1-201ENST00000637534 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
AP003399.1-201ENST00000637534 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
AP003399.1-201ENST00000637534 BBXQ8WY36 941 aaPredicted RBP13.54□□□□□ -0.24
AP003399.1-201ENST00000637534 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
AP003399.1-201ENST00000637534 RTN4Q9NQC3 1192 aaKnown RBP13.53□□□□□ -0.24
AP003399.1-201ENST00000637534 EVI5O60447 810 aa13.52□□□□□ -0.25
AP003399.1-201ENST00000637534 EMILIN3Q9NT22 766 aa13.52□□□□□ -0.25
AP003399.1-201ENST00000637534 TK2O00142 265 aa13.5□□□□□ -0.25
AP003399.1-201ENST00000637534 FOSBP53539 338 aa13.5□□□□□ -0.25
AP003399.1-201ENST00000637534 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
AP003399.1-201ENST00000637534 HRO43593 1189 aa13.48□□□□□ -0.25
AP003399.1-201ENST00000637534 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
AP003399.1-201ENST00000637534 KCNH8Q96L42 1107 aa13.47□□□□□ -0.25
AP003399.1-201ENST00000637534 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
AP003399.1-201ENST00000637534 JPH4Q96JJ6 628 aa13.46□□□□□ -0.25
AP003399.1-201ENST00000637534 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
AP003399.1-201ENST00000637534 PTPREP23469 700 aa13.4□□□□□ -0.26
AP003399.1-201ENST00000637534 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
AP003399.1-201ENST00000637534 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
AP003399.1-201ENST00000637534 ADAM33Q9BZ11 813 aa13.4□□□□□ -0.26
AP003399.1-201ENST00000637534 SPRYD3Q8NCJ5 442 aa13.39□□□□□ -0.27
AP003399.1-201ENST00000637534 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
AP003399.1-201ENST00000637534 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
AP003399.1-201ENST00000637534 DPYSL4O14531 572 aa13.35□□□□□ -0.27
AP003399.1-201ENST00000637534 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
AP003399.1-201ENST00000637534 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
AP003399.1-201ENST00000637534 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
AP003399.1-201ENST00000637534 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
AP003399.1-201ENST00000637534 KCTD12Q96CX2 325 aaKnown RBP13.33□□□□□ -0.28
AP003399.1-201ENST00000637534 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
AP003399.1-201ENST00000637534 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
AP003399.1-201ENST00000637534 PHF14O94880 888 aa13.29□□□□□ -0.28
AP003399.1-201ENST00000637534 BHMG1C9JSJ3 638 aaPredicted RBP13.28□□□□□ -0.28
AP003399.1-201ENST00000637534 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
AP003399.1-201ENST00000637534 PPP1R3GB7ZBB8 358 aa13.26□□□□□ -0.29
AP003399.1-201ENST00000637534 FBXW7Q969H0 707 aa13.26□□□□□ -0.29
AP003399.1-201ENST00000637534 COL9A1P20849 921 aa13.24□□□□□ -0.29
AP003399.1-201ENST00000637534 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms