RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
CTSD-210ENST00000637381 PCF11O94913 1555 aaKnown RBP20.79■□□□□ 0.92
CTSD-210ENST00000637381 CLIP1P30622 1438 aa20.78■□□□□ 0.92
CTSD-210ENST00000637381 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
CTSD-210ENST00000637381 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
CTSD-210ENST00000637381 YEATS2Q9ULM3 1422 aa20.76■□□□□ 0.91
CTSD-210ENST00000637381 SIGLEC1Q9BZZ2 1709 aa20.75■□□□□ 0.91
CTSD-210ENST00000637381 CDC42BPBQ9Y5S2 1711 aa20.75■□□□□ 0.91
CTSD-210ENST00000637381 MADDQ8WXG6 1647 aa20.75■□□□□ 0.91
CTSD-210ENST00000637381 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
CTSD-210ENST00000637381 ARID4BQ4LE39 1312 aaPredicted RBP20.74■□□□□ 0.91
CTSD-210ENST00000637381 ARHGAP5Q13017 1502 aa20.71■□□□□ 0.91
CTSD-210ENST00000637381 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
CTSD-210ENST00000637381 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
CTSD-210ENST00000637381 KDM5CP41229 1560 aa20.69■□□□□ 0.9
CTSD-210ENST00000637381 ATP10AO60312 1499 aa20.69■□□□□ 0.9
CTSD-210ENST00000637381 RIMS1Q86UR5 1692 aaKnown RBP20.67■□□□□ 0.9
CTSD-210ENST00000637381 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
CTSD-210ENST00000637381 AFAP1Q8N556 730 aa20.64■□□□□ 0.89
CTSD-210ENST00000637381 C9orf84Q5VXU9 1444 aa20.63■□□□□ 0.89
CTSD-210ENST00000637381 ABCC1P33527 1531 aa20.63■□□□□ 0.89
CTSD-210ENST00000637381 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
CTSD-210ENST00000637381 ARHGEF12Q9NZN5 1544 aa20.62■□□□□ 0.89
CTSD-210ENST00000637381 ITSN2Q9NZM3 1697 aa20.61■□□□□ 0.89
CTSD-210ENST00000637381 REREQ9P2R6 1566 aa20.6■□□□□ 0.89
CTSD-210ENST00000637381 FER1L4A9Z1Z3 1794 aa20.59■□□□□ 0.89
CTSD-210ENST00000637381 DIP2CQ9Y2E4 1556 aa20.59■□□□□ 0.89
CTSD-210ENST00000637381 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.89
CTSD-210ENST00000637381 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.89
CTSD-210ENST00000637381 TRAPPC8Q9Y2L5 1435 aa20.58■□□□□ 0.88
CTSD-210ENST00000637381 ABCA6Q8N139 1617 aa20.55■□□□□ 0.88
CTSD-210ENST00000637381 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
CTSD-210ENST00000637381 KIDINS220Q9ULH0 1771 aa20.54■□□□□ 0.88
CTSD-210ENST00000637381 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
CTSD-210ENST00000637381 MLECQ14165 292 aa20.53■□□□□ 0.88
CTSD-210ENST00000637381 AGLP35573 1532 aa20.52■□□□□ 0.87
CTSD-210ENST00000637381 ILDR1Q86SU0 546 aaPredicted RBP20.5■□□□□ 0.87
CTSD-210ENST00000637381 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
CTSD-210ENST00000637381 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
CTSD-210ENST00000637381 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
CTSD-210ENST00000637381 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
CTSD-210ENST00000637381 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
CTSD-210ENST00000637381 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
CTSD-210ENST00000637381 CFDP1Q9UEE9 299 aaPredicted RBP20.46■□□□□ 0.87
CTSD-210ENST00000637381 ZNF777Q9ULD5 760 aaPredicted RBP20.46■□□□□ 0.87
CTSD-210ENST00000637381 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
CTSD-210ENST00000637381 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
CTSD-210ENST00000637381 TIAM1Q13009 1591 aa20.43■□□□□ 0.86
CTSD-210ENST00000637381 PREX1Q8TCU6 1659 aa20.43■□□□□ 0.86
CTSD-210ENST00000637381 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
CTSD-210ENST00000637381 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
CTSD-210ENST00000637381 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
CTSD-210ENST00000637381 SPAG9O60271 1321 aaKnown RBP20.41■□□□□ 0.86
CTSD-210ENST00000637381 INO80Q9ULG1 1556 aaPredicted RBP20.41■□□□□ 0.86
CTSD-210ENST00000637381 HSPA2P54652 639 aa20.4■□□□□ 0.86
CTSD-210ENST00000637381 C3P01024 1663 aa20.39■□□□□ 0.86
CTSD-210ENST00000637381 ATP7AQ04656 1500 aa20.39■□□□□ 0.85
CTSD-210ENST00000637381 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
CTSD-210ENST00000637381 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
CTSD-210ENST00000637381 PLXNC1O60486 1568 aa20.37■□□□□ 0.85
CTSD-210ENST00000637381 SUPT6HQ7KZ85 1726 aaKnown RBP20.36■□□□□ 0.85
CTSD-210ENST00000637381 CNTLNQ9NXG0 1405 aa20.36■□□□□ 0.85
CTSD-210ENST00000637381 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
CTSD-210ENST00000637381 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
CTSD-210ENST00000637381 MROH2AA6NES4 1674 aa20.33■□□□□ 0.85
CTSD-210ENST00000637381 ADGBQ8N7X0 1667 aa20.33■□□□□ 0.85
CTSD-210ENST00000637381 NCOA2Q15596 1464 aa20.33■□□□□ 0.85
CTSD-210ENST00000637381 A2MP01023 1474 aa20.32■□□□□ 0.84
CTSD-210ENST00000637381 RTEL1-TNFRSF6BF6WH68 1400 aa20.32■□□□□ 0.84
CTSD-210ENST00000637381 ESF1Q9H501 851 aaKnown RBP20.31■□□□□ 0.84
CTSD-210ENST00000637381 MAP3K1Q13233 1512 aa20.3■□□□□ 0.84
CTSD-210ENST00000637381 STRCQ7RTU9 1775 aa20.3■□□□□ 0.84
CTSD-210ENST00000637381 UHRF1BP1Q6BDS2 1440 aa20.29■□□□□ 0.84
CTSD-210ENST00000637381 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
CTSD-210ENST00000637381 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
CTSD-210ENST00000637381 RSPH4AQ5TD94 716 aa20.27■□□□□ 0.84
CTSD-210ENST00000637381 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
CTSD-210ENST00000637381 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
CTSD-210ENST00000637381 NPATQ14207 1427 aa20.26■□□□□ 0.83
CTSD-210ENST00000637381 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
CTSD-210ENST00000637381 CLTCQ00610 1675 aaKnown RBP20.24■□□□□ 0.83
CTSD-210ENST00000637381 CCDC141Q6ZP82 1450 aa20.24■□□□□ 0.83
CTSD-210ENST00000637381 DHX29Q7Z478 1369 aaKnown RBP20.23■□□□□ 0.83
CTSD-210ENST00000637381 ARHGEF5Q12774 1597 aa20.23■□□□□ 0.83
CTSD-210ENST00000637381 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
CTSD-210ENST00000637381 KANK4Q5T7N3 995 aaPredicted RBP20.2■□□□□ 0.82
CTSD-210ENST00000637381 GGT6Q6P531 493 aa20.19■□□□□ 0.82
CTSD-210ENST00000637381 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
CTSD-210ENST00000637381 PTPRTO14522 1441 aa20.17■□□□□ 0.82
CTSD-210ENST00000637381 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
CTSD-210ENST00000637381 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
CTSD-210ENST00000637381 ZNF142P52746 1687 aaPredicted RBP20.14■□□□□ 0.81
CTSD-210ENST00000637381 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.81
CTSD-210ENST00000637381 FAM135AQ9P2D6 1515 aa20.14■□□□□ 0.81
CTSD-210ENST00000637381 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
CTSD-210ENST00000637381 MYOM3Q5VTT5 1437 aa20.13■□□□□ 0.81
CTSD-210ENST00000637381 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
CTSD-210ENST00000637381 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
CTSD-210ENST00000637381 MYO3AQ8NEV4 1616 aa20.12■□□□□ 0.81
CTSD-210ENST00000637381 KIF3BO15066 747 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms