RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	PPP1R15A	O75807	674 aa	Predicted RBP	3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	SPDYE6	P0CI01	402 aa		3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	SPDYE2	Q495Y8	402 aa		3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	PABPN1	Q86U42	306 aa	Known RBP eCLIP	3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	PROSER2	Q86WR7	435 aa	Predicted RBP	3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	RETREG2	Q8NC44	543 aa		3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	FAM117A	Q9C073	453 aa		3.93	□□□□□ -1.78
GABRB3-223	ENST00000637293	ONECUT3	O60422	494 aa	Predicted RBP	3.92	□□□□□ -1.78
GABRB3-223	ENST00000637293	ZNF428	Q96B54	188 aa		3.92	□□□□□ -1.78
GABRB3-223	ENST00000637293	ZNF777	Q9ULD5	760 aa	Predicted RBP	3.92	□□□□□ -1.78
GABRB3-223	ENST00000637293	NUBP1	P53384	320 aa		3.91	□□□□□ -1.78
GABRB3-223	ENST00000637293	KCNA1	Q09470	495 aa		3.91	□□□□□ -1.78
GABRB3-223	ENST00000637293	PCMTD1	Q96MG8	357 aa	Predicted RBP	3.91	□□□□□ -1.78
GABRB3-223	ENST00000637293	SSUH2	Q9Y2M2	353 aa		3.91	□□□□□ -1.78
GABRB3-223	ENST00000637293	BRD2	P25440	801 aa	Known RBP	3.9	□□□□□ -1.79
GABRB3-223	ENST00000637293	POLR3GL	Q9BT43	218 aa		3.9	□□□□□ -1.79
GABRB3-223	ENST00000637293	ARIH1	Q9Y4X5	557 aa	Predicted RBP	3.9	□□□□□ -1.79
GABRB3-223	ENST00000637293	PLEKHG3	A1L390	1219 aa		3.89	□□□□□ -1.79
GABRB3-223	ENST00000637293	MCM6	Q14566	821 aa		3.89	□□□□□ -1.79
GABRB3-223	ENST00000637293	FAM177A1	Q8N128	213 aa	Predicted RBP	3.89	□□□□□ -1.79
GABRB3-223	ENST00000637293	BRD1	O95696	1058 aa		3.88	□□□□□ -1.79
GABRB3-223	ENST00000637293	IRF5	Q13568	498 aa		3.88	□□□□□ -1.79
GABRB3-223	ENST00000637293	CCDC27	Q2M243	656 aa		3.88	□□□□□ -1.79
GABRB3-223	ENST00000637293	MINK1	Q8N4C8	1332 aa	Predicted RBP	3.88	□□□□□ -1.79
GABRB3-223	ENST00000637293	PPM1G	O15355	546 aa	Predicted RBP	3.87	□□□□□ -1.79
GABRB3-223	ENST00000637293	RBM26	Q5T8P6	1007 aa	Known RBP	3.87	□□□□□ -1.79
GABRB3-223	ENST00000637293	CCDC125	Q86Z20	511 aa		3.87	□□□□□ -1.79
GABRB3-223	ENST00000637293	FNBP4	Q8N3X1	1017 aa	Predicted RBP	3.87	□□□□□ -1.79
GABRB3-223	ENST00000637293	PDE4A	P27815	886 aa		3.86	□□□□□ -1.79
GABRB3-223	ENST00000637293	WWC1	Q8IX03	1113 aa		3.86	□□□□□ -1.79
GABRB3-223	ENST00000637293	PLSCR2	Q9NRY7	297 aa		3.86	□□□□□ -1.79
GABRB3-223	ENST00000637293	AMHR2	Q16671	573 aa		3.85	□□□□□ -1.79
GABRB3-223	ENST00000637293	NCL	P19338	710 aa	Known RBP	3.84	□□□□□ -1.79
GABRB3-223	ENST00000637293	ZNF467	Q7Z7K2	595 aa	Predicted RBP	3.84	□□□□□ -1.79
GABRB3-223	ENST00000637293	UST	Q9Y2C2	406 aa		3.84	□□□□□ -1.79
GABRB3-223	ENST00000637293	ZNF330	Q9Y3S2	320 aa	Predicted RBP	3.84	□□□□□ -1.79
GABRB3-223	ENST00000637293	CAPN15	O75808	1086 aa		3.83	□□□□□ -1.8
GABRB3-223	ENST00000637293	MAP2K5	Q13163	448 aa		3.83	□□□□□ -1.8
GABRB3-223	ENST00000637293	SND1	Q7KZF4	910 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
GABRB3-223	ENST00000637293	PARP9	Q8IXQ6	854 aa		3.83	□□□□□ -1.8
GABRB3-223	ENST00000637293	LARP6	Q9BRS8	491 aa	Known RBP	3.83	□□□□□ -1.8
GABRB3-223	ENST00000637293	SPDYE5	A6NIY4	337 aa		3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	CSB-PGBD3	P0DP91	1061 aa		3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	PDAP1	Q13442	181 aa	Known RBP	3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	TTLL12	Q14166	644 aa	Predicted RBP	3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	MFSD10	Q14728	455 aa		3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	MFRP	Q9BY79	579 aa		3.82	□□□□□ -1.8
GABRB3-223	ENST00000637293	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	IRF6	O14896	467 aa		3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	PYGB	P11216	843 aa		3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	NLRP6	P59044	892 aa		3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	SH3D19	Q5HYK7	790 aa		3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	CCDC102A	Q96A19	550 aa		3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	DDX27	Q96GQ7	796 aa	Known RBP	3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	CALR3	Q96L12	384 aa	Known RBP	3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	SPINK5	Q9NQ38	1064 aa	Predicted RBP	3.81	□□□□□ -1.8
GABRB3-223	ENST00000637293	RBM47	A0AV96	593 aa	Known RBP	3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	SPDYE16	A6NNV3	312 aa	Predicted RBP	3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	ERCC3	P19447	782 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	MLLT3	P42568	568 aa	Predicted RBP	3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	CAMK2B	Q13554	666 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	OSCAR	Q8IYS5	282 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	ANKRD13A	Q8IZ07	590 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	UBE2Q2	Q8WVN8	375 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	POM121	Q96HA1	1249 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	PRM3	Q9NNZ6	103 aa		3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	ATP1B4	Q9UN42	357 aa	Predicted RBP	3.8	□□□□□ -1.8
GABRB3-223	ENST00000637293	SKIV2L	Q15477	1246 aa	Known RBP	3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	DHX37	Q8IY37	1157 aa	Known RBP	3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	FAM9A	Q8IZU1	332 aa	Predicted RBP	3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	BANK1	Q8NDB2	785 aa		3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	PBXIP1	Q96AQ6	731 aa		3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	DRC1	Q96MC2	740 aa		3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	IGSF5	Q9NSI5	407 aa		3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	COG6	Q9Y2V7	657 aa		3.79	□□□□□ -1.8
GABRB3-223	ENST00000637293	NCKAP5L	Q9HCH0	1330 aa		3.78	□□□□□ -1.8
GABRB3-223	ENST00000637293	SPATA32	Q96LK8	384 aa		3.78	□□□□□ -1.8
GABRB3-223	ENST00000637293	PSMD1	Q99460	953 aa		3.78	□□□□□ -1.8
GABRB3-223	ENST00000637293	IVNS1ABP	Q9Y6Y0	642 aa		3.78	□□□□□ -1.8
GABRB3-223	ENST00000637293	SOX12	O15370	315 aa		3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	PPP1R37	O75864	691 aa		3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	TSR1	Q2NL82	804 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	B4GALNT3	Q6L9W6	998 aa		3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	GIGYF2	Q6Y7W6	1299 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	CRISPLD2	Q9H0B8	497 aa		3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	CWC22	Q9HCG8	908 aa	Known RBP	3.77	□□□□□ -1.81
GABRB3-223	ENST00000637293	NUTM2F	A1L443	756 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	GNPAT	O15228	680 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	GPR37	O15354	613 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	ABCB7	O75027	752 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	TAF7L	Q5H9L4	462 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	CC2D2B	Q6DHV5	1058 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	RASEF	Q8IZ41	740 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	SREK1	Q8WXA9	508 aa	Known RBP	3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	C8orf37	Q96NL8	207 aa		3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	BCCIP	Q9P287	314 aa	Known RBP eCLIP	3.76	□□□□□ -1.81
GABRB3-223	ENST00000637293	UNCX	A6NJT0	531 aa		3.75	□□□□□ -1.81
GABRB3-223	ENST00000637293	SMARCA5	O60264	1052 aa	Predicted RBP	3.75	□□□□□ -1.81
GABRB3-223	ENST00000637293	TBC1D12	O60347	775 aa		3.75	□□□□□ -1.81
GABRB3-223	ENST00000637293	CLSTN1	O94985	981 aa		3.75	□□□□□ -1.81

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