RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 RAD21O60216 631 aa11.34□□□□□ -0.59
CLN5-217ENST00000637278 FGD1P98174 961 aa11.34□□□□□ -0.59
CLN5-217ENST00000637278 APBB1O00213 710 aa11.33□□□□□ -0.6
CLN5-217ENST00000637278 TAF7LQ5H9L4 462 aa11.33□□□□□ -0.6
CLN5-217ENST00000637278 ZBTB7CA1YPR0 619 aa11.33□□□□□ -0.6
CLN5-217ENST00000637278 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
CLN5-217ENST00000637278 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
CLN5-217ENST00000637278 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
CLN5-217ENST00000637278 KIF27Q86VH2 1401 aa11.32□□□□□ -0.6
CLN5-217ENST00000637278 IRX6P78412 446 aaPredicted RBP11.32□□□□□ -0.6
CLN5-217ENST00000637278 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
CLN5-217ENST00000637278 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
CLN5-217ENST00000637278 ZMYND15Q9H091 742 aa11.29□□□□□ -0.6
CLN5-217ENST00000637278 ERCC6L2Q5T890 1561 aa11.29□□□□□ -0.6
CLN5-217ENST00000637278 SLC24A3Q9HC58 644 aa11.29□□□□□ -0.6
CLN5-217ENST00000637278 KIAA0586Q9BVV6 1533 aa11.28□□□□□ -0.6
CLN5-217ENST00000637278 PRG4Q92954 1404 aaPredicted RBP11.27□□□□□ -0.6
CLN5-217ENST00000637278 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
CLN5-217ENST00000637278 AEBP1Q8IUX7 1158 aa11.25□□□□□ -0.61
CLN5-217ENST00000637278 GPBP1L1Q9HC44 474 aaPredicted RBP11.24□□□□□ -0.61
CLN5-217ENST00000637278 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
CLN5-217ENST00000637278 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
CLN5-217ENST00000637278 BRD2P25440 801 aaKnown RBP11.23□□□□□ -0.61
CLN5-217ENST00000637278 IGF1RP08069 1367 aa11.22□□□□□ -0.61
CLN5-217ENST00000637278 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
CLN5-217ENST00000637278 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.62
CLN5-217ENST00000637278 IQGAP2Q13576 1575 aa11.19□□□□□ -0.62
CLN5-217ENST00000637278 CARMIL2Q6F5E8 1435 aa11.19□□□□□ -0.62
CLN5-217ENST00000637278 ADCY10Q96PN6 1610 aa11.18□□□□□ -0.62
CLN5-217ENST00000637278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLN5-217ENST00000637278 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
CLN5-217ENST00000637278 HSP90B1P14625 803 aaKnown RBP11.18□□□□□ -0.62
CLN5-217ENST00000637278 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
CLN5-217ENST00000637278 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
CLN5-217ENST00000637278 DIP2BQ9P265 1576 aa11.16□□□□□ -0.62
CLN5-217ENST00000637278 CCDC82Q8N4S0 544 aa11.15□□□□□ -0.62
CLN5-217ENST00000637278 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
CLN5-217ENST00000637278 USP35Q9P2H5 1018 aa11.15□□□□□ -0.62
CLN5-217ENST00000637278 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
CLN5-217ENST00000637278 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
CLN5-217ENST00000637278 UHRF1BP1LA0JNW5 1464 aa11.14□□□□□ -0.63
CLN5-217ENST00000637278 RAPGEF2Q9Y4G8 1499 aa11.14□□□□□ -0.63
CLN5-217ENST00000637278 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
CLN5-217ENST00000637278 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
CLN5-217ENST00000637278 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
CLN5-217ENST00000637278 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
CLN5-217ENST00000637278 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
CLN5-217ENST00000637278 PTPRGP23470 1445 aa11.11□□□□□ -0.63
CLN5-217ENST00000637278 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
CLN5-217ENST00000637278 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
CLN5-217ENST00000637278 AAMPQ13685 434 aa11.1□□□□□ -0.63
CLN5-217ENST00000637278 GLI2P10070 1586 aa11.1□□□□□ -0.63
CLN5-217ENST00000637278 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
CLN5-217ENST00000637278 ZNF692Q9BU19 519 aaPredicted RBP11.09□□□□□ -0.63
CLN5-217ENST00000637278 KIAA0556O60303 1618 aa11.09□□□□□ -0.63
CLN5-217ENST00000637278 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
CLN5-217ENST00000637278 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
CLN5-217ENST00000637278 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CLN5-217ENST00000637278 DISP1Q96F81 1524 aa11.07□□□□□ -0.64
CLN5-217ENST00000637278 UACAQ9BZF9 1416 aa11.06□□□□□ -0.64
CLN5-217ENST00000637278 KDM6BO15054 1643 aa11.05□□□□□ -0.64
CLN5-217ENST00000637278 BRPF3Q9ULD4 1205 aa11.05□□□□□ -0.64
CLN5-217ENST00000637278 FAM69CQ0P6D2 419 aa11.04□□□□□ -0.64
CLN5-217ENST00000637278 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
CLN5-217ENST00000637278 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
CLN5-217ENST00000637278 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
CLN5-217ENST00000637278 RBM10P98175 930 aaKnown RBP11.02□□□□□ -0.64
CLN5-217ENST00000637278 NEUROD1Q13562 356 aa11.02□□□□□ -0.64
CLN5-217ENST00000637278 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.65
CLN5-217ENST00000637278 ZCCHC11Q5TAX3 1644 aaKnown RBP11.02□□□□□ -0.65
CLN5-217ENST00000637278 PUS7Q96PZ0 661 aaKnown RBP11.02□□□□□ -0.65
CLN5-217ENST00000637278 DEKP35659 375 aaKnown RBP11.01□□□□□ -0.65
CLN5-217ENST00000637278 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
CLN5-217ENST00000637278 TEX14Q8IWB6 1497 aa11.01□□□□□ -0.65
CLN5-217ENST00000637278 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
CLN5-217ENST00000637278 MAP3K4Q9Y6R4 1608 aa11.01□□□□□ -0.65
CLN5-217ENST00000637278 EEA1Q15075 1411 aa11□□□□□ -0.65
CLN5-217ENST00000637278 CLUAP1Q96AJ1 413 aa11□□□□□ -0.65
CLN5-217ENST00000637278 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
CLN5-217ENST00000637278 FAM177A1Q8N128 213 aaPredicted RBP10.99□□□□□ -0.65
CLN5-217ENST00000637278 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
CLN5-217ENST00000637278 PPRC1Q5VV67 1664 aaKnown RBP10.98□□□□□ -0.65
CLN5-217ENST00000637278 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
CLN5-217ENST00000637278 ABCA8O94911 1581 aa10.97□□□□□ -0.65
CLN5-217ENST00000637278 EPRSP07814 1512 aaKnown RBP10.97□□□□□ -0.65
CLN5-217ENST00000637278 CFAP43Q8NDM7 1665 aa10.97□□□□□ -0.65
CLN5-217ENST00000637278 WDR7Q9Y4E6 1490 aa10.96□□□□□ -0.65
CLN5-217ENST00000637278 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.66
CLN5-217ENST00000637278 NAP1L5Q96NT1 182 aaPredicted RBP10.95□□□□□ -0.66
CLN5-217ENST00000637278 TMED8Q6PL24 325 aaPredicted RBP10.95□□□□□ -0.66
CLN5-217ENST00000637278 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
CLN5-217ENST00000637278 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
CLN5-217ENST00000637278 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
CLN5-217ENST00000637278 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
CLN5-217ENST00000637278 MAGI3Q5TCQ9 1506 aa10.92□□□□□ -0.66
CLN5-217ENST00000637278 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
CLN5-217ENST00000637278 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
CLN5-217ENST00000637278 TMCO4Q5TGY1 634 aa10.91□□□□□ -0.66
CLN5-217ENST00000637278 ERICH6BQ5W0A0 696 aa10.91□□□□□ -0.66
CLN5-217ENST00000637278 ZNF526Q8TF50 670 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms