RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 ZSWIM6Q9HCJ5 1215 aa4.91□□□□□ -1.62
SYNGAP1-220ENST00000637194 ZNF710Q8N1W2 664 aa4.9□□□□□ -1.63
SYNGAP1-220ENST00000637194 DNAJC5Q9H3Z4 198 aa4.89□□□□□ -1.63
SYNGAP1-220ENST00000637194 HS3ST6Q96QI5 342 aa4.88□□□□□ -1.63
SYNGAP1-220ENST00000637194 FAM205CA6NFA0 338 aa4.87□□□□□ -1.63
SYNGAP1-220ENST00000637194 KIF3CO14782 793 aa4.87□□□□□ -1.63
SYNGAP1-220ENST00000637194 POTEB3A0JP26 581 aa4.86□□□□□ -1.63
SYNGAP1-220ENST00000637194 GPR153Q6NV75 609 aa4.86□□□□□ -1.63
SYNGAP1-220ENST00000637194 POTEBQ6S5H4 581 aa4.86□□□□□ -1.63
SYNGAP1-220ENST00000637194 C2orf72A6NCS6 295 aa4.85□□□□□ -1.63
SYNGAP1-220ENST00000637194 CHGAP10645 457 aaKnown RBP4.85□□□□□ -1.63
SYNGAP1-220ENST00000637194 RYDENQ9NUL5 291 aaKnown RBP4.85□□□□□ -1.63
SYNGAP1-220ENST00000637194 ERBB3P21860 1342 aa4.85□□□□□ -1.63
SYNGAP1-220ENST00000637194 PPP1R37O75864 691 aa4.84□□□□□ -1.63
SYNGAP1-220ENST00000637194 TMC2Q8TDI7 906 aa4.84□□□□□ -1.63
SYNGAP1-220ENST00000637194 SLC34A2O95436 690 aa4.83□□□□□ -1.64
SYNGAP1-220ENST00000637194 SPNS2Q8IVW8 549 aa4.83□□□□□ -1.64
SYNGAP1-220ENST00000637194 KRTAP3-3Q9BYR6 98 aa4.83□□□□□ -1.64
SYNGAP1-220ENST00000637194 KRTAP3-2Q9BYR7 98 aa4.83□□□□□ -1.64
SYNGAP1-220ENST00000637194 MMRN1Q13201 1228 aa4.81□□□□□ -1.64
SYNGAP1-220ENST00000637194 NKX1-1Q15270 411 aaPredicted RBP4.81□□□□□ -1.64
SYNGAP1-220ENST00000637194 ARSIQ5FYB1 569 aa4.81□□□□□ -1.64
SYNGAP1-220ENST00000637194 VARS2Q5ST30 1063 aaKnown RBP4.81□□□□□ -1.64
SYNGAP1-220ENST00000637194 ZNF687Q8N1G0 1237 aa4.81□□□□□ -1.64
SYNGAP1-220ENST00000637194 FOXK1P85037 733 aa4.8□□□□□ -1.64
SYNGAP1-220ENST00000637194 ZNF316A6NFI3 1004 aaPredicted RBP4.79□□□□□ -1.64
SYNGAP1-220ENST00000637194 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
SYNGAP1-220ENST00000637194 PCDHGA4Q9Y5G9 962 aa4.79□□□□□ -1.64
SYNGAP1-220ENST00000637194 PTCD2Q8WV60 388 aaKnown RBP4.78□□□□□ -1.64
SYNGAP1-220ENST00000637194 KHSRPQ92945 711 aaKnown RBP eCLIP4.77□□□□□ -1.65
SYNGAP1-220ENST00000637194 GTPBP6O43824 516 aaPredicted RBP4.76□□□□□ -1.65
SYNGAP1-220ENST00000637194 NUDT7P0C024 238 aa4.76□□□□□ -1.65
SYNGAP1-220ENST00000637194 PBX2P40425 430 aa4.76□□□□□ -1.65
SYNGAP1-220ENST00000637194 PLPP6Q8IY26 295 aa4.76□□□□□ -1.65
SYNGAP1-220ENST00000637194 KDM4FA0A1W2PPD8 638 aa4.75□□□□□ -1.65
SYNGAP1-220ENST00000637194 PSDA5PKW4 1024 aaPredicted RBP4.75□□□□□ -1.65
SYNGAP1-220ENST00000637194 PTGER2P43116 358 aa4.75□□□□□ -1.65
SYNGAP1-220ENST00000637194 DSG2Q14126 1118 aa4.75□□□□□ -1.65
SYNGAP1-220ENST00000637194 CRISPLD2Q9H0B8 497 aa4.75□□□□□ -1.65
SYNGAP1-220ENST00000637194 TBC1D12O60347 775 aa4.74□□□□□ -1.65
SYNGAP1-220ENST00000637194 LHX6Q9UPM6 363 aa4.74□□□□□ -1.65
SYNGAP1-220ENST00000637194 PDE4AP27815 886 aa4.73□□□□□ -1.65
SYNGAP1-220ENST00000637194 DCAF8L2P0C7V8 631 aa4.72□□□□□ -1.65
SYNGAP1-220ENST00000637194 LSM11P83369 360 aaKnown RBP eCLIP4.72□□□□□ -1.65
SYNGAP1-220ENST00000637194 PPP1R15BQ5SWA1 713 aa4.72□□□□□ -1.65
SYNGAP1-220ENST00000637194 OXER1Q8TDS5 423 aa4.72□□□□□ -1.65
SYNGAP1-220ENST00000637194 NCKAP5LQ9HCH0 1330 aa4.72□□□□□ -1.65
SYNGAP1-220ENST00000637194 MFSD10Q14728 455 aa4.7□□□□□ -1.66
SYNGAP1-220ENST00000637194 POTEEQ6S8J3 1075 aa4.7□□□□□ -1.66
SYNGAP1-220ENST00000637194 RNF166Q96A37 237 aaPredicted RBP4.7□□□□□ -1.66
SYNGAP1-220ENST00000637194 MYT1LQ9UL68 1186 aa4.7□□□□□ -1.66
SYNGAP1-220ENST00000637194 ARHGAP33O14559 1287 aa4.69□□□□□ -1.66
SYNGAP1-220ENST00000637194 AMER1Q5JTC6 1135 aaPredicted RBP4.69□□□□□ -1.66
SYNGAP1-220ENST00000637194 PPP4R3BQ5MIZ7 849 aa4.69□□□□□ -1.66
SYNGAP1-220ENST00000637194 ANKRD13DQ6ZTN6 518 aa4.69□□□□□ -1.66
SYNGAP1-220ENST00000637194 BBXQ8WY36 941 aaPredicted RBP4.68□□□□□ -1.66
SYNGAP1-220ENST00000637194 DDX27Q96GQ7 796 aaKnown RBP4.68□□□□□ -1.66
SYNGAP1-220ENST00000637194 TK2O00142 265 aa4.67□□□□□ -1.66
SYNGAP1-220ENST00000637194 LARP6Q9BRS8 491 aaKnown RBP4.67□□□□□ -1.66
SYNGAP1-220ENST00000637194 ANO8Q9HCE9 1232 aaPredicted RBP4.67□□□□□ -1.66
SYNGAP1-220ENST00000637194 UPF1Q92900 1129 aaKnown RBP eCLIP4.66□□□□□ -1.66
SYNGAP1-220ENST00000637194 AXIN2Q9Y2T1 843 aa4.66□□□□□ -1.66
SYNGAP1-220ENST00000637194 ADGRD1Q6QNK2 874 aa4.65□□□□□ -1.67
SYNGAP1-220ENST00000637194 KCNH8Q96L42 1107 aa4.65□□□□□ -1.67
SYNGAP1-220ENST00000637194 HRO43593 1189 aa4.64□□□□□ -1.67
SYNGAP1-220ENST00000637194 EVI5O60447 810 aa4.64□□□□□ -1.67
SYNGAP1-220ENST00000637194 FOSBP53539 338 aa4.64□□□□□ -1.67
SYNGAP1-220ENST00000637194 CADPS2Q86UW7 1296 aa4.64□□□□□ -1.67
SYNGAP1-220ENST00000637194 BCL2L12Q9HB09 334 aa4.64□□□□□ -1.67
SYNGAP1-220ENST00000637194 PSEN2P49810 448 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 MAP3K9P80192 1104 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 CAMK2BQ13554 666 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 DMRTA1Q5VZB9 504 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 ZNF454Q8N9F8 522 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 JPH4Q96JJ6 628 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 SLC4A5Q9BY07 1137 aa4.63□□□□□ -1.67
SYNGAP1-220ENST00000637194 KCNK17Q96T54 332 aa4.62□□□□□ -1.67
SYNGAP1-220ENST00000637194 EMILIN3Q9NT22 766 aa4.62□□□□□ -1.67
SYNGAP1-220ENST00000637194 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.62□□□□□ -1.67
SYNGAP1-220ENST00000637194 PTPREP23469 700 aa4.61□□□□□ -1.67
SYNGAP1-220ENST00000637194 SPRYD3Q8NCJ5 442 aa4.61□□□□□ -1.67
SYNGAP1-220ENST00000637194 RTN4Q9NQC3 1192 aaKnown RBP4.61□□□□□ -1.67
SYNGAP1-220ENST00000637194 ZDHHC16Q969W1 377 aa4.6□□□□□ -1.67
SYNGAP1-220ENST00000637194 VPS9D1Q9Y2B5 631 aa4.6□□□□□ -1.67
SYNGAP1-220ENST00000637194 FBXW7Q969H0 707 aa4.59□□□□□ -1.67
SYNGAP1-220ENST00000637194 STAC3Q96MF2 364 aa4.59□□□□□ -1.67
SYNGAP1-220ENST00000637194 HCSTQ9UBK5 93 aa4.59□□□□□ -1.67
SYNGAP1-220ENST00000637194 PHF14O94880 888 aa4.58□□□□□ -1.68
SYNGAP1-220ENST00000637194 TYW1BQ6NUM6 668 aa4.58□□□□□ -1.68
SYNGAP1-220ENST00000637194 ADAM33Q9BZ11 813 aa4.58□□□□□ -1.68
SYNGAP1-220ENST00000637194 PCDHGA10Q9Y5H3 936 aa4.58□□□□□ -1.68
SYNGAP1-220ENST00000637194 PPP1R3GB7ZBB8 358 aa4.57□□□□□ -1.68
SYNGAP1-220ENST00000637194 BHMG1C9JSJ3 638 aaPredicted RBP4.57□□□□□ -1.68
SYNGAP1-220ENST00000637194 EPAS1Q99814 870 aa4.57□□□□□ -1.68
SYNGAP1-220ENST00000637194 ZBED2Q9BTP6 218 aa4.57□□□□□ -1.68
SYNGAP1-220ENST00000637194 DPYSL4O14531 572 aa4.56□□□□□ -1.68
SYNGAP1-220ENST00000637194 SPDYE16A6NNV3 312 aaPredicted RBP4.55□□□□□ -1.68
SYNGAP1-220ENST00000637194 PAXIP1Q6ZW49 1069 aaPredicted RBP4.55□□□□□ -1.68
SYNGAP1-220ENST00000637194 NBPF3Q9H094 633 aa4.55□□□□□ -1.68
SYNGAP1-220ENST00000637194 ARIH1Q9Y4X5 557 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms