RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
CLN8-210ENST00000636605 EMP3P54852 163 aa11.5□□□□□ -0.57
CLN8-210ENST00000636605 KIF3CO14782 793 aa11.49□□□□□ -0.57
CLN8-210ENST00000636605 HOXB1P14653 301 aaPredicted RBP11.48□□□□□ -0.57
CLN8-210ENST00000636605 POTEB3A0JP26 581 aa11.46□□□□□ -0.57
CLN8-210ENST00000636605 PPP1R37O75864 691 aa11.46□□□□□ -0.57
CLN8-210ENST00000636605 POTEBQ6S5H4 581 aa11.46□□□□□ -0.57
CLN8-210ENST00000636605 ZSWIM6Q9HCJ5 1215 aa11.45□□□□□ -0.58
CLN8-210ENST00000636605 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
CLN8-210ENST00000636605 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
CLN8-210ENST00000636605 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
CLN8-210ENST00000636605 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
CLN8-210ENST00000636605 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
CLN8-210ENST00000636605 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
CLN8-210ENST00000636605 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
CLN8-210ENST00000636605 GPR153Q6NV75 609 aa11.4□□□□□ -0.58
CLN8-210ENST00000636605 KRTAP3-3Q9BYR6 98 aa11.36□□□□□ -0.59
CLN8-210ENST00000636605 KRTAP3-2Q9BYR7 98 aa11.36□□□□□ -0.59
CLN8-210ENST00000636605 SLC34A2O95436 690 aa11.33□□□□□ -0.6
CLN8-210ENST00000636605 TMC2Q8TDI7 906 aa11.32□□□□□ -0.6
CLN8-210ENST00000636605 ERBB3P21860 1342 aa11.31□□□□□ -0.6
CLN8-210ENST00000636605 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
CLN8-210ENST00000636605 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
CLN8-210ENST00000636605 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
CLN8-210ENST00000636605 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
CLN8-210ENST00000636605 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLN8-210ENST00000636605 FOXK1P85037 733 aa11.26□□□□□ -0.61
CLN8-210ENST00000636605 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
CLN8-210ENST00000636605 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
CLN8-210ENST00000636605 PCDHGA4Q9Y5G9 962 aa11.24□□□□□ -0.61
CLN8-210ENST00000636605 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
CLN8-210ENST00000636605 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
CLN8-210ENST00000636605 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
CLN8-210ENST00000636605 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
CLN8-210ENST00000636605 KDM4FA0A1W2PPD8 638 aa11.2□□□□□ -0.62
CLN8-210ENST00000636605 DSG2Q14126 1118 aa11.2□□□□□ -0.62
CLN8-210ENST00000636605 PTCD2Q8WV60 388 aaKnown RBP11.2□□□□□ -0.62
CLN8-210ENST00000636605 NACADO15069 1562 aa11.2□□□□□ -0.62
CLN8-210ENST00000636605 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
CLN8-210ENST00000636605 NUDT7P0C024 238 aa11.19□□□□□ -0.62
CLN8-210ENST00000636605 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
CLN8-210ENST00000636605 DCAF8L2P0C7V8 631 aa11.18□□□□□ -0.62
CLN8-210ENST00000636605 MYO15BQ96JP2 1530 aa11.17□□□□□ -0.62
CLN8-210ENST00000636605 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
CLN8-210ENST00000636605 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
CLN8-210ENST00000636605 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
CLN8-210ENST00000636605 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
CLN8-210ENST00000636605 DCAF1Q9Y4B6 1507 aa11.1□□□□□ -0.63
CLN8-210ENST00000636605 OXER1Q8TDS5 423 aa11.1□□□□□ -0.63
CLN8-210ENST00000636605 PPP1R15BQ5SWA1 713 aa11.09□□□□□ -0.63
CLN8-210ENST00000636605 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
CLN8-210ENST00000636605 PBX2P40425 430 aa11.07□□□□□ -0.64
CLN8-210ENST00000636605 MFSD10Q14728 455 aa11.07□□□□□ -0.64
CLN8-210ENST00000636605 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
CLN8-210ENST00000636605 PSDA5PKW4 1024 aaPredicted RBP11.06□□□□□ -0.64
CLN8-210ENST00000636605 PDE4AP27815 886 aa11.06□□□□□ -0.64
CLN8-210ENST00000636605 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
CLN8-210ENST00000636605 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
CLN8-210ENST00000636605 BBXQ8WY36 941 aaPredicted RBP11.04□□□□□ -0.64
CLN8-210ENST00000636605 TBC1D12O60347 775 aa11.03□□□□□ -0.64
CLN8-210ENST00000636605 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
CLN8-210ENST00000636605 PTGER2P43116 358 aa11.01□□□□□ -0.65
CLN8-210ENST00000636605 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
CLN8-210ENST00000636605 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLN8-210ENST00000636605 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
CLN8-210ENST00000636605 RNF166Q96A37 237 aaPredicted RBP10.97□□□□□ -0.65
CLN8-210ENST00000636605 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
CLN8-210ENST00000636605 ARHGAP33O14559 1287 aa10.96□□□□□ -0.65
CLN8-210ENST00000636605 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
CLN8-210ENST00000636605 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
CLN8-210ENST00000636605 EMILIN3Q9NT22 766 aa10.95□□□□□ -0.66
CLN8-210ENST00000636605 ANO8Q9HCE9 1232 aaPredicted RBP10.94□□□□□ -0.66
CLN8-210ENST00000636605 FOSBP53539 338 aa10.91□□□□□ -0.66
CLN8-210ENST00000636605 CAMK2BQ13554 666 aa10.91□□□□□ -0.66
CLN8-210ENST00000636605 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
CLN8-210ENST00000636605 ADGRD1Q6QNK2 874 aa10.9□□□□□ -0.66
CLN8-210ENST00000636605 TK2O00142 265 aa10.89□□□□□ -0.67
CLN8-210ENST00000636605 EVI5O60447 810 aa10.89□□□□□ -0.67
CLN8-210ENST00000636605 PSEN2P49810 448 aa10.89□□□□□ -0.67
CLN8-210ENST00000636605 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
CLN8-210ENST00000636605 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
CLN8-210ENST00000636605 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
CLN8-210ENST00000636605 BCL2L12Q9HB09 334 aa10.87□□□□□ -0.67
CLN8-210ENST00000636605 HRO43593 1189 aa10.86□□□□□ -0.67
CLN8-210ENST00000636605 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
CLN8-210ENST00000636605 MAP3K9P80192 1104 aa10.84□□□□□ -0.67
CLN8-210ENST00000636605 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
CLN8-210ENST00000636605 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
CLN8-210ENST00000636605 SHROOM4Q9ULL8 1493 aa10.81□□□□□ -0.68
CLN8-210ENST00000636605 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
CLN8-210ENST00000636605 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
CLN8-210ENST00000636605 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
CLN8-210ENST00000636605 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
CLN8-210ENST00000636605 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
CLN8-210ENST00000636605 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
CLN8-210ENST00000636605 DPYSL4O14531 572 aa10.77□□□□□ -0.69
CLN8-210ENST00000636605 PTPREP23469 700 aa10.77□□□□□ -0.69
CLN8-210ENST00000636605 PAXIP1Q6ZW49 1069 aaPredicted RBP10.77□□□□□ -0.69
CLN8-210ENST00000636605 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
CLN8-210ENST00000636605 BICRAQ9NZM4 1560 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms