RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 A6NJR5 290 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 TRAK2O60296 914 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 PAK3O75914 559 aaPredicted RBP2.91□□□□□ -1.94
GABRB3-220ENST00000636512 PDE4CQ08493 712 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 CCDC82Q8N4S0 544 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 EFCAB3Q8N7B9 438 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 FAM117AQ9C073 453 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 SERPINA10Q9UK55 444 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 PHF8Q9UPP1 1060 aa2.91□□□□□ -1.94
GABRB3-220ENST00000636512 MINK1Q8N4C8 1332 aaPredicted RBP2.91□□□□□ -1.94
GABRB3-220ENST00000636512 SPDYE16A6NNV3 312 aaPredicted RBP2.9□□□□□ -1.95
GABRB3-220ENST00000636512 MFSD10Q14728 455 aa2.9□□□□□ -1.95
GABRB3-220ENST00000636512 C1orf115Q9H7X2 142 aa2.9□□□□□ -1.95
GABRB3-220ENST00000636512 GOPCQ9HD26 462 aa2.9□□□□□ -1.95
GABRB3-220ENST00000636512 ACIN1Q9UKV3 1341 aaKnown RBP2.9□□□□□ -1.95
GABRB3-220ENST00000636512 NUTM2FA1L443 756 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 MLLT3P42568 568 aaPredicted RBP2.89□□□□□ -1.95
GABRB3-220ENST00000636512 TTLL12Q14166 644 aaPredicted RBP2.89□□□□□ -1.95
GABRB3-220ENST00000636512 TMCO4Q5TGY1 634 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 FBXO22Q8NEZ5 403 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 TRAIPQ9BWF2 469 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 SHROOM4Q9ULL8 1493 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 NCKAP5LQ9HCH0 1330 aa2.89□□□□□ -1.95
GABRB3-220ENST00000636512 PATL2C9JE40 543 aaKnown RBP2.88□□□□□ -1.95
GABRB3-220ENST00000636512 MAP2K5Q13163 448 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 CAMK2BQ13554 666 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 WWC1Q8IX03 1113 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 CLUAP1Q96AJ1 413 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 CRISPLD2Q9H0B8 497 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 MYT1LQ9UL68 1186 aa2.88□□□□□ -1.95
GABRB3-220ENST00000636512 ZNF777Q9ULD5 760 aaPredicted RBP2.88□□□□□ -1.95
GABRB3-220ENST00000636512 PPP1R15BQ5SWA1 713 aa2.87□□□□□ -1.95
GABRB3-220ENST00000636512 PROSER2Q86WR7 435 aaPredicted RBP2.87□□□□□ -1.95
GABRB3-220ENST00000636512 NECTIN2Q92692 538 aa2.87□□□□□ -1.95
GABRB3-220ENST00000636512 CCDC102AQ96A19 550 aa2.87□□□□□ -1.95
GABRB3-220ENST00000636512 PLEKHG3A1L390 1219 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 GRXCR2A6NFK2 248 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 DPYSL4O14531 572 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 IRF6O14896 467 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 GNPATO15228 680 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 FCHSD2O94868 740 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 HMGB1P09429 215 aaKnown RBP2.86□□□□□ -1.95
GABRB3-220ENST00000636512 HIC1Q14526 733 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 AMHR2Q16671 573 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 REM2Q8IYK8 340 aaPredicted RBP2.86□□□□□ -1.95
GABRB3-220ENST00000636512 FBXW7Q969H0 707 aa2.86□□□□□ -1.95
GABRB3-220ENST00000636512 MAP3K9P80192 1104 aa2.85□□□□□ -1.95
GABRB3-220ENST00000636512 PARP9Q8IXQ6 854 aa2.85□□□□□ -1.95
GABRB3-220ENST00000636512 GZF1Q9H116 711 aaPredicted RBP2.85□□□□□ -1.95
GABRB3-220ENST00000636512 PRM3Q9NNZ6 103 aa2.85□□□□□ -1.95
GABRB3-220ENST00000636512 E9PSI1 815 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 RBM25P49756 843 aaKnown RBP2.84□□□□□ -1.95
GABRB3-220ENST00000636512 MFAP1P55081 439 aaKnown RBP2.84□□□□□ -1.95
GABRB3-220ENST00000636512 MCM6Q14566 821 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 PDIA6Q15084 440 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 IFNL1Q8IU54 200 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 TMC2Q8TDI7 906 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 GPHNQ9NQX3 736 aaPredicted RBP2.84□□□□□ -1.95
GABRB3-220ENST00000636512 ZNF330Q9Y3S2 320 aaPredicted RBP2.84□□□□□ -1.95
GABRB3-220ENST00000636512 FARP1Q9Y4F1 1045 aaPredicted RBP2.84□□□□□ -1.95
GABRB3-220ENST00000636512 CCDC61Q9Y6R9 512 aa2.84□□□□□ -1.95
GABRB3-220ENST00000636512 G3V3G9 751 aa2.83□□□□□ -1.96
GABRB3-220ENST00000636512 MAP3K13O43283 966 aa2.83□□□□□ -1.96
GABRB3-220ENST00000636512 ONECUT3O60422 494 aaPredicted RBP2.83□□□□□ -1.96
GABRB3-220ENST00000636512 PPP1R15AO75807 674 aaPredicted RBP2.83□□□□□ -1.96
GABRB3-220ENST00000636512 SKIV2LQ15477 1246 aaKnown RBP2.83□□□□□ -1.96
GABRB3-220ENST00000636512 SH3D19Q5HYK7 790 aa2.83□□□□□ -1.96
GABRB3-220ENST00000636512 CHADLQ6NUI6 762 aa2.83□□□□□ -1.96
GABRB3-220ENST00000636512 GIGYF2Q6Y7W6 1299 aaKnown RBP2.83□□□□□ -1.96
GABRB3-220ENST00000636512 MTMR7Q9Y216 660 aa2.83□□□□□ -1.96
GABRB3-220ENST00000636512 TBC1D12O60347 775 aa2.82□□□□□ -1.96
GABRB3-220ENST00000636512 CLCN1P35523 988 aa2.82□□□□□ -1.96
GABRB3-220ENST00000636512 RETREG2Q8NC44 543 aa2.82□□□□□ -1.96
GABRB3-220ENST00000636512 SPDYE5A6NIY4 337 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 PITPNM1O00562 1244 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 MS4A1P11836 297 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 DIXDC1Q155Q3 683 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 RGS22Q8NE09 1264 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 KIF12Q96FN5 646 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 MS4A4AQ96JQ5 239 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 CALR3Q96L12 384 aaKnown RBP2.81□□□□□ -1.96
GABRB3-220ENST00000636512 EMILIN3Q9NT22 766 aa2.81□□□□□ -1.96
GABRB3-220ENST00000636512 GPR37O15354 613 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 CSB-PGBD3P0DP91 1061 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 SSTR3P32745 418 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 CACNB1Q02641 598 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 KCNA1Q09470 495 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 DSG2Q14126 1118 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 FOXD4L5Q5VV16 416 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 FNBP4Q8N3X1 1017 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 BANK1Q8NDB2 785 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 FOXD4L4Q8WXT5 416 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 POM121Q96HA1 1249 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 TMEM106CQ9BVX2 250 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 GPCPD1Q9NPB8 672 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 PLSCR2Q9NRY7 297 aa2.8□□□□□ -1.96
GABRB3-220ENST00000636512 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.8□□□□□ -1.96
GABRB3-220ENST00000636512 BRD1O95696 1058 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 FOXK1P85037 733 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 TMEM259Q4ZIN3 620 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms