RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 PLCH2O75038 1416 aa8.36□□□□□ -1.07
CHD2-224ENST00000636410 GPATCH8Q9UKJ3 1502 aaKnown RBP8.34□□□□□ -1.07
CHD2-224ENST00000636410 SAMD9LQ8IVG5 1584 aa8.34□□□□□ -1.07
CHD2-224ENST00000636410 RICTORQ6R327 1708 aa8.34□□□□□ -1.07
CHD2-224ENST00000636410 CCNB3Q8WWL7 1395 aa8.34□□□□□ -1.07
CHD2-224ENST00000636410 ABCC1P33527 1531 aa8.34□□□□□ -1.08
CHD2-224ENST00000636410 FRMPD1Q5SYB0 1578 aa8.33□□□□□ -1.08
CHD2-224ENST00000636410 KANK4Q5T7N3 995 aaPredicted RBP8.33□□□□□ -1.08
CHD2-224ENST00000636410 PHLDB1Q86UU1 1377 aa8.33□□□□□ -1.08
CHD2-224ENST00000636410 AKNAQ7Z591 1439 aa8.32□□□□□ -1.08
CHD2-224ENST00000636410 ADGRL1O94910 1474 aa8.32□□□□□ -1.08
CHD2-224ENST00000636410 MYOM3Q5VTT5 1437 aa8.31□□□□□ -1.08
CHD2-224ENST00000636410 SYCP2Q9BX26 1530 aa8.3□□□□□ -1.08
CHD2-224ENST00000636410 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
CHD2-224ENST00000636410 CAMSAP2Q08AD1 1489 aa8.3□□□□□ -1.08
CHD2-224ENST00000636410 PLEKHH2Q8IVE3 1493 aa8.3□□□□□ -1.08
CHD2-224ENST00000636410 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
CHD2-224ENST00000636410 POGZQ7Z3K3 1410 aa8.29□□□□□ -1.08
CHD2-224ENST00000636410 MIA2Q96PC5 1412 aa8.29□□□□□ -1.08
CHD2-224ENST00000636410 ZMYM4Q5VZL5 1548 aa8.29□□□□□ -1.08
CHD2-224ENST00000636410 DENND4BO75064 1496 aaPredicted RBP8.29□□□□□ -1.08
CHD2-224ENST00000636410 KDM5CP41229 1560 aa8.29□□□□□ -1.08
CHD2-224ENST00000636410 PTPN23Q9H3S7 1636 aa8.29□□□□□ -1.08
CHD2-224ENST00000636410 CROCC2H7BZ55 1655 aa8.28□□□□□ -1.08
CHD2-224ENST00000636410 HECW2Q9P2P5 1572 aa8.28□□□□□ -1.08
CHD2-224ENST00000636410 ZNF518AQ6AHZ1 1483 aa8.28□□□□□ -1.08
CHD2-224ENST00000636410 CFDP1Q9UEE9 299 aaPredicted RBP8.28□□□□□ -1.08
CHD2-224ENST00000636410 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
CHD2-224ENST00000636410 ARHGEF5Q12774 1597 aa8.27□□□□□ -1.09
CHD2-224ENST00000636410 ARHGEF40Q8TER5 1519 aa8.27□□□□□ -1.09
CHD2-224ENST00000636410 ARHGEF12Q9NZN5 1544 aa8.27□□□□□ -1.09
CHD2-224ENST00000636410 FGD6Q6ZV73 1430 aa8.27□□□□□ -1.09
CHD2-224ENST00000636410 KIAA1107Q9UPP5 1409 aa8.27□□□□□ -1.09
CHD2-224ENST00000636410 TCOF1Q13428 1488 aaKnown RBP8.26□□□□□ -1.09
CHD2-224ENST00000636410 INO80Q9ULG1 1556 aaPredicted RBP8.26□□□□□ -1.09
CHD2-224ENST00000636410 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
CHD2-224ENST00000636410 CCDC141Q6ZP82 1450 aa8.25□□□□□ -1.09
CHD2-224ENST00000636410 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
CHD2-224ENST00000636410 MBD5Q9P267 1494 aa8.25□□□□□ -1.09
CHD2-224ENST00000636410 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
CHD2-224ENST00000636410 ZFYVE16Q7Z3T8 1539 aa8.24□□□□□ -1.09
CHD2-224ENST00000636410 TRAPPC8Q9Y2L5 1435 aa8.24□□□□□ -1.09
CHD2-224ENST00000636410 KIDINS220Q9ULH0 1771 aa8.24□□□□□ -1.09
CHD2-224ENST00000636410 ABCA6Q8N139 1617 aa8.24□□□□□ -1.09
CHD2-224ENST00000636410 ATP7AQ04656 1500 aa8.24□□□□□ -1.09
CHD2-224ENST00000636410 DIP2CQ9Y2E4 1556 aa8.23□□□□□ -1.09
CHD2-224ENST00000636410 MAST1Q9Y2H9 1570 aa8.23□□□□□ -1.09
CHD2-224ENST00000636410 RAPGEF3O95398 923 aa8.23□□□□□ -1.09
CHD2-224ENST00000636410 MLH3Q9UHC1 1453 aa8.23□□□□□ -1.09
CHD2-224ENST00000636410 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
CHD2-224ENST00000636410 ZNF644Q9H582 1327 aaPredicted RBP8.23□□□□□ -1.09
CHD2-224ENST00000636410 PPARGC1BQ86YN6 1023 aaKnown RBP8.22□□□□□ -1.09
CHD2-224ENST00000636410 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
CHD2-224ENST00000636410 REREQ9P2R6 1566 aa8.22□□□□□ -1.09
CHD2-224ENST00000636410 SHANK2Q9UPX8 1470 aa8.21□□□□□ -1.09
CHD2-224ENST00000636410 HNRNPMP52272 730 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHD2-224ENST00000636410 RRBP1Q9P2E9 1410 aaKnown RBP8.2□□□□□ -1.1
CHD2-224ENST00000636410 YEATS2Q9ULM3 1422 aa8.2□□□□□ -1.1
CHD2-224ENST00000636410 SIGLEC1Q9BZZ2 1709 aa8.2□□□□□ -1.1
CHD2-224ENST00000636410 AFAP1Q8N556 730 aa8.2□□□□□ -1.1
CHD2-224ENST00000636410 RTEL1-TNFRSF6BF6WH68 1400 aa8.2□□□□□ -1.1
CHD2-224ENST00000636410 DAPK1P53355 1430 aa8.2□□□□□ -1.1
CHD2-224ENST00000636410 RSPH4AQ5TD94 716 aa8.19□□□□□ -1.1
CHD2-224ENST00000636410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.19□□□□□ -1.1
CHD2-224ENST00000636410 C9orf84Q5VXU9 1444 aa8.19□□□□□ -1.1
CHD2-224ENST00000636410 SPAG9O60271 1321 aaKnown RBP8.18□□□□□ -1.1
CHD2-224ENST00000636410 ABCC5O15440 1437 aa8.18□□□□□ -1.1
CHD2-224ENST00000636410 ATP10AO60312 1499 aa8.18□□□□□ -1.1
CHD2-224ENST00000636410 EIF2AK4Q9P2K8 1649 aaKnown RBP8.17□□□□□ -1.1
CHD2-224ENST00000636410 BCORL1Q5H9F3 1711 aa8.17□□□□□ -1.1
CHD2-224ENST00000636410 ADGRL2O95490 1459 aa8.16□□□□□ -1.1
CHD2-224ENST00000636410 AGLP35573 1532 aa8.16□□□□□ -1.1
CHD2-224ENST00000636410 FAM50AQ14320 339 aaKnown RBP8.16□□□□□ -1.1
CHD2-224ENST00000636410 MYT1LQ9UL68 1186 aa8.16□□□□□ -1.1
CHD2-224ENST00000636410 A2MP01023 1474 aa8.15□□□□□ -1.1
CHD2-224ENST00000636410 TSPY4P0CV99 314 aa8.15□□□□□ -1.1
CHD2-224ENST00000636410 TSPY10P0CW01 314 aa8.15□□□□□ -1.1
CHD2-224ENST00000636410 GCC2Q8IWJ2 1684 aa8.14□□□□□ -1.11
CHD2-224ENST00000636410 DUOX2Q9NRD8 1548 aa8.14□□□□□ -1.11
CHD2-224ENST00000636410 FER1L4A9Z1Z3 1794 aa8.14□□□□□ -1.11
CHD2-224ENST00000636410 ADAMTSL3P82987 1691 aa8.14□□□□□ -1.11
CHD2-224ENST00000636410 RNF17Q9BXT8 1623 aaKnown RBP8.14□□□□□ -1.11
CHD2-224ENST00000636410 PTPRKQ15262 1439 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 DEPDC5O75140 1603 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 MADDQ8WXG6 1647 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 NCOA1Q15788 1441 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 ERBINQ96RT1 1412 aa8.12□□□□□ -1.11
CHD2-224ENST00000636410 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
CHD2-224ENST00000636410 RIMS1Q86UR5 1692 aaKnown RBP8.11□□□□□ -1.11
CHD2-224ENST00000636410 ROCK1Q13464 1354 aa8.11□□□□□ -1.11
CHD2-224ENST00000636410 DHX29Q7Z478 1369 aaKnown RBP8.11□□□□□ -1.11
CHD2-224ENST00000636410 KIF15Q9NS87 1388 aa8.11□□□□□ -1.11
CHD2-224ENST00000636410 MROH1Q8NDA8 1641 aa8.11□□□□□ -1.11
CHD2-224ENST00000636410 PRDM15P57071 1507 aaPredicted RBP8.1□□□□□ -1.11
CHD2-224ENST00000636410 FAM135AQ9P2D6 1515 aa8.1□□□□□ -1.11
CHD2-224ENST00000636410 MROH2AA6NES4 1674 aa8.1□□□□□ -1.11
CHD2-224ENST00000636410 UNC13BO14795 1591 aa8.1□□□□□ -1.11
CHD2-224ENST00000636410 ARID4BQ4LE39 1312 aaPredicted RBP8.09□□□□□ -1.11
CHD2-224ENST00000636410 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms