RNA–Protein interactions for RNA: ENST00000636232.1

LGI1-220, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,167 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-220ENST00000636232 OTUD5Q96G74 571 aa7.36□□□□□ -1.23
LGI1-220ENST00000636232 SCUBE2Q9NQ36 999 aa7.36□□□□□ -1.23
LGI1-220ENST00000636232 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.36□□□□□ -1.23
LGI1-220ENST00000636232 TSHZ2Q9NRE2 1034 aa7.35□□□□□ -1.23
LGI1-220ENST00000636232 CADPS2Q86UW7 1296 aa7.35□□□□□ -1.23
LGI1-220ENST00000636232 TMEM92Q6UXU6 159 aa7.34□□□□□ -1.23
LGI1-220ENST00000636232 NACADO15069 1562 aa7.34□□□□□ -1.23
LGI1-220ENST00000636232 HAP1P54257 671 aaPredicted RBP7.32□□□□□ -1.24
LGI1-220ENST00000636232 SLAIN1Q8ND83 568 aa7.31□□□□□ -1.24
LGI1-220ENST00000636232 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
LGI1-220ENST00000636232 NCKAP5LQ9HCH0 1330 aa7.3□□□□□ -1.24
LGI1-220ENST00000636232 C2orf72A6NCS6 295 aa7.3□□□□□ -1.24
LGI1-220ENST00000636232 KIF3CO14782 793 aa7.3□□□□□ -1.24
LGI1-220ENST00000636232 CRISPLD2Q9H0B8 497 aa7.3□□□□□ -1.24
LGI1-220ENST00000636232 BICRAQ9NZM4 1560 aa7.29□□□□□ -1.24
LGI1-220ENST00000636232 TMC2Q8TDI7 906 aa7.29□□□□□ -1.24
LGI1-220ENST00000636232 GPHNQ9NQX3 736 aaPredicted RBP7.28□□□□□ -1.24
LGI1-220ENST00000636232 PDE4AP27815 886 aa7.27□□□□□ -1.24
LGI1-220ENST00000636232 LARP6Q9BRS8 491 aaKnown RBP7.26□□□□□ -1.25
LGI1-220ENST00000636232 CECR2Q9BXF3 1484 aa7.26□□□□□ -1.25
LGI1-220ENST00000636232 FOXK1P85037 733 aa7.25□□□□□ -1.25
LGI1-220ENST00000636232 DSG2Q14126 1118 aa7.25□□□□□ -1.25
LGI1-220ENST00000636232 MFSD10Q14728 455 aa7.25□□□□□ -1.25
LGI1-220ENST00000636232 DDX27Q96GQ7 796 aaKnown RBP7.23□□□□□ -1.25
LGI1-220ENST00000636232 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
LGI1-220ENST00000636232 PPP1R15BQ5SWA1 713 aa7.22□□□□□ -1.25
LGI1-220ENST00000636232 PLPP6Q8IY26 295 aa7.22□□□□□ -1.25
LGI1-220ENST00000636232 KDM2AQ9Y2K7 1162 aa7.22□□□□□ -1.25
LGI1-220ENST00000636232 VSIG10Q8N0Z9 540 aa7.2□□□□□ -1.26
LGI1-220ENST00000636232 HOXB3P14651 431 aaPredicted RBP7.2□□□□□ -1.26
LGI1-220ENST00000636232 WDR70Q9NW82 654 aa7.19□□□□□ -1.26
LGI1-220ENST00000636232 SNPHO15079 494 aa7.18□□□□□ -1.26
LGI1-220ENST00000636232 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
LGI1-220ENST00000636232 DOK7Q18PE1 504 aa7.17□□□□□ -1.26
LGI1-220ENST00000636232 SLC34A2O95436 690 aa7.16□□□□□ -1.26
LGI1-220ENST00000636232 CAMK2BQ13554 666 aa7.16□□□□□ -1.26
LGI1-220ENST00000636232 E2F4Q16254 413 aa7.15□□□□□ -1.27
LGI1-220ENST00000636232 EMILIN3Q9NT22 766 aa7.14□□□□□ -1.27
LGI1-220ENST00000636232 PTCD2Q8WV60 388 aaKnown RBP7.13□□□□□ -1.27
LGI1-220ENST00000636232 OXER1Q8TDS5 423 aa7.13□□□□□ -1.27
LGI1-220ENST00000636232 FAM163AQ96GL9 167 aaPredicted RBP7.13□□□□□ -1.27
LGI1-220ENST00000636232 EIF4G1Q04637 1599 aaKnown RBP7.13□□□□□ -1.27
LGI1-220ENST00000636232 RIMBP2O15034 1052 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 ZNF710Q8N1W2 664 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 UPF1Q92900 1129 aaKnown RBP eCLIP7.12□□□□□ -1.27
LGI1-220ENST00000636232 MYO15BQ96JP2 1530 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 ST18O60284 1047 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 GPR153Q6NV75 609 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 ZSWIM6Q9HCJ5 1215 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 PCDHGA4Q9Y5G9 962 aa7.12□□□□□ -1.27
LGI1-220ENST00000636232 ARSIQ5FYB1 569 aa7.1□□□□□ -1.27
LGI1-220ENST00000636232 LCE2DQ5TA82 110 aaPredicted RBP7.1□□□□□ -1.27
LGI1-220ENST00000636232 KCNV2Q8TDN2 545 aa7.1□□□□□ -1.27
LGI1-220ENST00000636232 SHROOM4Q9ULL8 1493 aa7.1□□□□□ -1.27
LGI1-220ENST00000636232 KHSRPQ92945 711 aaKnown RBP eCLIP7.1□□□□□ -1.27
LGI1-220ENST00000636232 TBC1D12O60347 775 aa7.09□□□□□ -1.27
LGI1-220ENST00000636232 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
LGI1-220ENST00000636232 DPYSL4O14531 572 aa7.08□□□□□ -1.28
LGI1-220ENST00000636232 MAP3K9P80192 1104 aa7.08□□□□□ -1.28
LGI1-220ENST00000636232 ARIH1Q9Y4X5 557 aaPredicted RBP7.08□□□□□ -1.28
LGI1-220ENST00000636232 P3H3Q8IVL6 736 aa7.08□□□□□ -1.28
LGI1-220ENST00000636232 KDM4FA0A1W2PPD8 638 aa7.07□□□□□ -1.28
LGI1-220ENST00000636232 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
LGI1-220ENST00000636232 NUDT7P0C024 238 aa7.06□□□□□ -1.28
LGI1-220ENST00000636232 EVI5O60447 810 aa7.05□□□□□ -1.28
LGI1-220ENST00000636232 MARVELD3Q96A59 401 aa7.05□□□□□ -1.28
LGI1-220ENST00000636232 ANO8Q9HCE9 1232 aaPredicted RBP7.03□□□□□ -1.28
LGI1-220ENST00000636232 CUX2O14529 1486 aa7.02□□□□□ -1.29
LGI1-220ENST00000636232 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
LGI1-220ENST00000636232 EMP3P54852 163 aa7.02□□□□□ -1.29
LGI1-220ENST00000636232 PDIA6Q15084 440 aa7.02□□□□□ -1.29
LGI1-220ENST00000636232 LHX6Q9UPM6 363 aa7.01□□□□□ -1.29
LGI1-220ENST00000636232 ZNF316A6NFI3 1004 aaPredicted RBP7.01□□□□□ -1.29
LGI1-220ENST00000636232 SCRIBQ14160 1630 aa7□□□□□ -1.29
LGI1-220ENST00000636232 ERBB3P21860 1342 aa6.99□□□□□ -1.29
LGI1-220ENST00000636232 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
LGI1-220ENST00000636232 FAM205CA6NFA0 338 aa6.98□□□□□ -1.29
LGI1-220ENST00000636232 PTGER2P43116 358 aa6.98□□□□□ -1.29
LGI1-220ENST00000636232 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
LGI1-220ENST00000636232 SEMA3EO15041 775 aa6.96□□□□□ -1.29
LGI1-220ENST00000636232 VARS2Q5ST30 1063 aaKnown RBP6.96□□□□□ -1.29
LGI1-220ENST00000636232 POTEGQ6S5H5 508 aa6.96□□□□□ -1.29
LGI1-220ENST00000636232 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.29
LGI1-220ENST00000636232 POTEMA6NI47 508 aa6.96□□□□□ -1.3
LGI1-220ENST00000636232 FOSBP53539 338 aa6.96□□□□□ -1.3
LGI1-220ENST00000636232 DDX12PQ92771 950 aa6.96□□□□□ -1.3
LGI1-220ENST00000636232 JPH4Q96JJ6 628 aa6.95□□□□□ -1.3
LGI1-220ENST00000636232 PSDA5PKW4 1024 aaPredicted RBP6.95□□□□□ -1.3
LGI1-220ENST00000636232 MLLT3P42568 568 aaPredicted RBP6.95□□□□□ -1.3
LGI1-220ENST00000636232 ZNF454Q8N9F8 522 aa6.95□□□□□ -1.3
LGI1-220ENST00000636232 PCDHGA10Q9Y5H3 936 aa6.95□□□□□ -1.3
LGI1-220ENST00000636232 ERCC6Q03468 1493 aa6.94□□□□□ -1.3
LGI1-220ENST00000636232 PHF14O94880 888 aa6.94□□□□□ -1.3
LGI1-220ENST00000636232 GRXCR2A6NFK2 248 aa6.93□□□□□ -1.3
LGI1-220ENST00000636232 TESPA1A2RU30 521 aaPredicted RBP6.93□□□□□ -1.3
LGI1-220ENST00000636232 PPP4R3BQ5MIZ7 849 aa6.93□□□□□ -1.3
LGI1-220ENST00000636232 TYW1BQ6NUM6 668 aa6.92□□□□□ -1.3
LGI1-220ENST00000636232 ZNF687Q8N1G0 1237 aa6.92□□□□□ -1.3
LGI1-220ENST00000636232 EPAS1Q99814 870 aa6.92□□□□□ -1.3
LGI1-220ENST00000636232 ZCCHC6Q5VYS8 1495 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms