RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 CADPS2Q86UW7 1296 aa5.33□□□□□ -1.56
CD46-219ENST00000636114 TMEM121BQ9BXQ6 578 aaPredicted RBP5.33□□□□□ -1.56
CD46-219ENST00000636114 KDM2AQ9Y2K7 1162 aa5.33□□□□□ -1.56
CD46-219ENST00000636114 MMRN1Q13201 1228 aa5.32□□□□□ -1.56
CD46-219ENST00000636114 CDAN1Q8IWY9 1227 aa5.32□□□□□ -1.56
CD46-219ENST00000636114 CRISPLD2Q9H0B8 497 aa5.3□□□□□ -1.56
CD46-219ENST00000636114 NCKAP5LQ9HCH0 1330 aa5.3□□□□□ -1.56
CD46-219ENST00000636114 PDE4AP27815 886 aa5.3□□□□□ -1.56
CD46-219ENST00000636114 C3orf67Q6ZVT6 689 aa5.3□□□□□ -1.56
CD46-219ENST00000636114 WDR70Q9NW82 654 aa5.3□□□□□ -1.56
CD46-219ENST00000636114 MAMSTRQ6ZN01 415 aa5.28□□□□□ -1.56
CD46-219ENST00000636114 TMC2Q8TDI7 906 aa5.28□□□□□ -1.56
CD46-219ENST00000636114 LARP6Q9BRS8 491 aaKnown RBP5.28□□□□□ -1.56
CD46-219ENST00000636114 GPHNQ9NQX3 736 aaPredicted RBP5.28□□□□□ -1.56
CD46-219ENST00000636114 MFSD10Q14728 455 aa5.27□□□□□ -1.57
CD46-219ENST00000636114 DDX27Q96GQ7 796 aaKnown RBP5.27□□□□□ -1.57
CD46-219ENST00000636114 POTEB2H3BUK9 544 aa5.26□□□□□ -1.57
CD46-219ENST00000636114 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.26□□□□□ -1.57
CD46-219ENST00000636114 C2orf72A6NCS6 295 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 KIF3CO14782 793 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 XP32Q5T750 250 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 P3H3Q8IVL6 736 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 POTEJP0CG39 1038 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 FOXK1P85037 733 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 TMEM92Q6UXU6 159 aa5.25□□□□□ -1.57
CD46-219ENST00000636114 DSG2Q14126 1118 aa5.24□□□□□ -1.57
CD46-219ENST00000636114 PPP1R15BQ5SWA1 713 aa5.24□□□□□ -1.57
CD46-219ENST00000636114 SCUBE2Q9NQ36 999 aa5.24□□□□□ -1.57
CD46-219ENST00000636114 E2F4Q16254 413 aa5.23□□□□□ -1.57
CD46-219ENST00000636114 PLPP6Q8IY26 295 aa5.22□□□□□ -1.57
CD46-219ENST00000636114 KCNV2Q8TDN2 545 aa5.22□□□□□ -1.57
CD46-219ENST00000636114 CAMK2BQ13554 666 aa5.21□□□□□ -1.58
CD46-219ENST00000636114 LCE2DQ5TA82 110 aaPredicted RBP5.21□□□□□ -1.58
CD46-219ENST00000636114 SLAIN1Q8ND83 568 aa5.2□□□□□ -1.58
CD46-219ENST00000636114 ARHGEF1Q92888 912 aaKnown RBP5.19□□□□□ -1.58
CD46-219ENST00000636114 SPNS2Q8IVW8 549 aa5.19□□□□□ -1.58
CD46-219ENST00000636114 FAM163AQ96GL9 167 aaPredicted RBP5.19□□□□□ -1.58
CD46-219ENST00000636114 BCANQ96GW7 911 aa5.19□□□□□ -1.58
CD46-219ENST00000636114 ARIH1Q9Y4X5 557 aaPredicted RBP5.18□□□□□ -1.58
CD46-219ENST00000636114 NBR1Q14596 966 aa5.17□□□□□ -1.58
CD46-219ENST00000636114 EMILIN3Q9NT22 766 aa5.17□□□□□ -1.58
CD46-219ENST00000636114 SLC34A2O95436 690 aa5.16□□□□□ -1.58
CD46-219ENST00000636114 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
CD46-219ENST00000636114 DOK7Q18PE1 504 aa5.15□□□□□ -1.59
CD46-219ENST00000636114 OXER1Q8TDS5 423 aa5.15□□□□□ -1.59
CD46-219ENST00000636114 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
CD46-219ENST00000636114 DPYSL4O14531 572 aa5.14□□□□□ -1.59
CD46-219ENST00000636114 PTCD2Q8WV60 388 aaKnown RBP5.14□□□□□ -1.59
CD46-219ENST00000636114 UPF1Q92900 1129 aaKnown RBP eCLIP5.14□□□□□ -1.595e-18■■□□□ 11.5
CD46-219ENST00000636114 SNPHO15079 494 aa5.14□□□□□ -1.59
CD46-219ENST00000636114 MAP3K9P80192 1104 aa5.14□□□□□ -1.59
CD46-219ENST00000636114 RIMBP2O15034 1052 aa5.13□□□□□ -1.59
CD46-219ENST00000636114 TBC1D12O60347 775 aa5.13□□□□□ -1.59
CD46-219ENST00000636114 SPDYE16A6NNV3 312 aaPredicted RBP5.12□□□□□ -1.59
CD46-219ENST00000636114 HOXB3P14651 431 aaPredicted RBP5.12□□□□□ -1.59
CD46-219ENST00000636114 PDIA6Q15084 440 aa5.12□□□□□ -1.59
CD46-219ENST00000636114 ZNF316A6NFI3 1004 aaPredicted RBP5.12□□□□□ -1.59
CD46-219ENST00000636114 ZSWIM6Q9HCJ5 1215 aa5.12□□□□□ -1.59
CD46-219ENST00000636114 PCDHGA4Q9Y5G9 962 aa5.11□□□□□ -1.59
CD46-219ENST00000636114 ZNF710Q8N1W2 664 aa5.11□□□□□ -1.59
CD46-219ENST00000636114 SEMA3EO15041 775 aa5.1□□□□□ -1.59
CD46-219ENST00000636114 EVI5O60447 810 aa5.1□□□□□ -1.59
CD46-219ENST00000636114 TESPA1A2RU30 521 aaPredicted RBP5.09□□□□□ -1.59
CD46-219ENST00000636114 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
CD46-219ENST00000636114 GPR153Q6NV75 609 aa5.08□□□□□ -1.6
CD46-219ENST00000636114 ARSIQ5FYB1 569 aa5.08□□□□□ -1.6
CD46-219ENST00000636114 SMYD5Q6GMV2 418 aa5.08□□□□□ -1.6
CD46-219ENST00000636114 ANO8Q9HCE9 1232 aaPredicted RBP5.08□□□□□ -1.6
CD46-219ENST00000636114 KDM4FA0A1W2PPD8 638 aa5.07□□□□□ -1.6
CD46-219ENST00000636114 PTGER2P43116 358 aa5.07□□□□□ -1.6
CD46-219ENST00000636114 NUDT7P0C024 238 aa5.06□□□□□ -1.6
CD46-219ENST00000636114 HOXB1P14653 301 aaPredicted RBP5.06□□□□□ -1.6
CD46-219ENST00000636114 MLLT3P42568 568 aaPredicted RBP5.06□□□□□ -1.6
CD46-219ENST00000636114 KHSRPQ92945 711 aaKnown RBP eCLIP5.06□□□□□ -1.67e-9■■■□□ 15
CD46-219ENST00000636114 GRXCR2A6NFK2 248 aa5.04□□□□□ -1.6
CD46-219ENST00000636114 DDX12PQ92771 950 aa5.04□□□□□ -1.6
CD46-219ENST00000636114 ST18O60284 1047 aa5.03□□□□□ -1.6
CD46-219ENST00000636114 LMOD2Q6P5Q4 547 aa5.03□□□□□ -1.6
CD46-219ENST00000636114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.03□□□□□ -1.6
CD46-219ENST00000636114 JPH4Q96JJ6 628 aa5.03□□□□□ -1.6
CD46-219ENST00000636114 PSDA5PKW4 1024 aaPredicted RBP5.03□□□□□ -1.6
CD46-219ENST00000636114 PHF14O94880 888 aa5.03□□□□□ -1.6
CD46-219ENST00000636114 EPAS1Q99814 870 aa5.03□□□□□ -1.6
CD46-219ENST00000636114 LHX6Q9UPM6 363 aa5.02□□□□□ -1.61
CD46-219ENST00000636114 PCDHGA10Q9Y5H3 936 aa5.02□□□□□ -1.61
CD46-219ENST00000636114 OSBPP22059 807 aa5.01□□□□□ -1.61
CD46-219ENST00000636114 FOSBP53539 338 aa5.01□□□□□ -1.61
CD46-219ENST00000636114 ZNF454Q8N9F8 522 aa5.01□□□□□ -1.61
CD46-219ENST00000636114 FBXW7Q969H0 707 aa5.01□□□□□ -1.61
CD46-219ENST00000636114 RBM26Q5T8P6 1007 aaKnown RBP5.01□□□□□ -1.61
CD46-219ENST00000636114 TYW1BQ6NUM6 668 aa5.01□□□□□ -1.61
CD46-219ENST00000636114 PPP4R3BQ5MIZ7 849 aa5□□□□□ -1.61
CD46-219ENST00000636114 EMP3P54852 163 aa5□□□□□ -1.61
CD46-219ENST00000636114 EN1Q05925 392 aaPredicted RBP5□□□□□ -1.61
CD46-219ENST00000636114 ZDHHC16Q969W1 377 aa5□□□□□ -1.61
CD46-219ENST00000636114 MAP3K7O43318 606 aa4.99□□□□□ -1.61
CD46-219ENST00000636114 GPIHBP1Q8IV16 184 aa4.99□□□□□ -1.61
CD46-219ENST00000636114 MARVELD3Q96A59 401 aa4.99□□□□□ -1.61
CD46-219ENST00000636114 ERBB3P21860 1342 aa4.98□□□□□ -1.61
CD46-219ENST00000636114 NUTM2FA1L443 756 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms