RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
SMARCA2-244ENST00000635659 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
SMARCA2-244ENST00000635659 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
SMARCA2-244ENST00000635659 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
SMARCA2-244ENST00000635659 AK7Q96M32 723 aa12.77□□□□□ -0.37
SMARCA2-244ENST00000635659 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
SMARCA2-244ENST00000635659 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
SMARCA2-244ENST00000635659 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
SMARCA2-244ENST00000635659 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
SMARCA2-244ENST00000635659 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
SMARCA2-244ENST00000635659 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
SMARCA2-244ENST00000635659 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
SMARCA2-244ENST00000635659 SUPT5HO00267 1087 aaKnown RBP12.69□□□□□ -0.38
SMARCA2-244ENST00000635659 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
SMARCA2-244ENST00000635659 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-244ENST00000635659 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
SMARCA2-244ENST00000635659 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
SMARCA2-244ENST00000635659 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-244ENST00000635659 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-244ENST00000635659 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-244ENST00000635659 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
SMARCA2-244ENST00000635659 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 NCAPD3P42695 1498 aa12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
SMARCA2-244ENST00000635659 SMARCA2P51531 1590 aa12.62□□□□□ -0.39
SMARCA2-244ENST00000635659 PDIA6Q15084 440 aa12.62□□□□□ -0.39
SMARCA2-244ENST00000635659 TRIM66O15016 1216 aa12.61□□□□□ -0.39
SMARCA2-244ENST00000635659 DPYSL4O14531 572 aa12.6□□□□□ -0.39
SMARCA2-244ENST00000635659 PDE4DQ08499 809 aa12.59□□□□□ -0.39
SMARCA2-244ENST00000635659 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
SMARCA2-244ENST00000635659 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
SMARCA2-244ENST00000635659 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
SMARCA2-244ENST00000635659 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
SMARCA2-244ENST00000635659 HAX1O00165 279 aa12.58□□□□□ -0.4
SMARCA2-244ENST00000635659 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
SMARCA2-244ENST00000635659 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
SMARCA2-244ENST00000635659 TIE1P35590 1138 aa12.55□□□□□ -0.4
SMARCA2-244ENST00000635659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■□ 21
SMARCA2-244ENST00000635659 GPR37O15354 613 aa12.54□□□□□ -0.4
SMARCA2-244ENST00000635659 DSG2Q14126 1118 aa12.54□□□□□ -0.4
SMARCA2-244ENST00000635659 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
SMARCA2-244ENST00000635659 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
SMARCA2-244ENST00000635659 FOXK1P85037 733 aa12.5□□□□□ -0.41
SMARCA2-244ENST00000635659 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
SMARCA2-244ENST00000635659 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
SMARCA2-244ENST00000635659 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
SMARCA2-244ENST00000635659 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
SMARCA2-244ENST00000635659 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
SMARCA2-244ENST00000635659 WIZO95785 1651 aa12.46□□□□□ -0.41
SMARCA2-244ENST00000635659 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
SMARCA2-244ENST00000635659 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-244ENST00000635659 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
SMARCA2-244ENST00000635659 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
SMARCA2-244ENST00000635659 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
SMARCA2-244ENST00000635659 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
SMARCA2-244ENST00000635659 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
SMARCA2-244ENST00000635659 AMHR2Q16671 573 aa12.41□□□□□ -0.42
SMARCA2-244ENST00000635659 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
SMARCA2-244ENST00000635659 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-244ENST00000635659 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
SMARCA2-244ENST00000635659 EVX2Q03828 476 aa12.4□□□□□ -0.42
SMARCA2-244ENST00000635659 NESP48681 1621 aa12.4□□□□□ -0.42
SMARCA2-244ENST00000635659 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
SMARCA2-244ENST00000635659 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
SMARCA2-244ENST00000635659 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
SMARCA2-244ENST00000635659 IRF6O14896 467 aa12.38□□□□□ -0.43
SMARCA2-244ENST00000635659 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-244ENST00000635659 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
SMARCA2-244ENST00000635659 KIF3CO14782 793 aa12.36□□□□□ -0.43
SMARCA2-244ENST00000635659 GNPATO15228 680 aa12.36□□□□□ -0.43
SMARCA2-244ENST00000635659 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
SMARCA2-244ENST00000635659 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
SMARCA2-244ENST00000635659 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-244ENST00000635659 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
SMARCA2-244ENST00000635659 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-244ENST00000635659 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
SMARCA2-244ENST00000635659 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-244ENST00000635659 OSBPP22059 807 aa12.34□□□□□ -0.43
SMARCA2-244ENST00000635659 HIC1Q14526 733 aa12.34□□□□□ -0.43
SMARCA2-244ENST00000635659 FCHSD2O94868 740 aa12.33□□□□□ -0.44
SMARCA2-244ENST00000635659 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
SMARCA2-244ENST00000635659 ERCC6Q03468 1493 aa12.33□□□□□ -0.44
SMARCA2-244ENST00000635659 PTGER2P43116 358 aa12.32□□□□□ -0.44
SMARCA2-244ENST00000635659 CUX2O14529 1486 aa12.32□□□□□ -0.44
SMARCA2-244ENST00000635659 FLIIQ13045 1269 aa12.31□□□□□ -0.44
SMARCA2-244ENST00000635659 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
SMARCA2-244ENST00000635659 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-244ENST00000635659 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
SMARCA2-244ENST00000635659 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-244ENST00000635659 G3V3G9 751 aa12.27□□□□□ -0.45
SMARCA2-244ENST00000635659 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
SMARCA2-244ENST00000635659 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-244ENST00000635659 FECHP22830 423 aa12.26□□□□□ -0.45
SMARCA2-244ENST00000635659 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCA2-244ENST00000635659 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
SMARCA2-244ENST00000635659 IER5LQ5T953 404 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms