RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
LINC01108-202ENST00000635227 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
LINC01108-202ENST00000635227 PDE4AP27815 886 aa15.94■□□□□ 0.14
LINC01108-202ENST00000635227 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
LINC01108-202ENST00000635227 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.94■□□□□ 0.14
LINC01108-202ENST00000635227 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
LINC01108-202ENST00000635227 C2orf72A6NCS6 295 aa15.92■□□□□ 0.14
LINC01108-202ENST00000635227 KIF3CO14782 793 aa15.91■□□□□ 0.14
LINC01108-202ENST00000635227 LHX8Q68G74 356 aa15.91■□□□□ 0.14
LINC01108-202ENST00000635227 TMC2Q8TDI7 906 aa15.91■□□□□ 0.14
LINC01108-202ENST00000635227 SCUBE2Q9NQ36 999 aa15.88■□□□□ 0.13
LINC01108-202ENST00000635227 MFSD10Q14728 455 aa15.87■□□□□ 0.13
LINC01108-202ENST00000635227 MAMSTRQ6ZN01 415 aa15.87■□□□□ 0.13
LINC01108-202ENST00000635227 DDX27Q96GQ7 796 aaKnown RBP15.86■□□□□ 0.13
LINC01108-202ENST00000635227 DSG2Q14126 1118 aa15.85■□□□□ 0.13
LINC01108-202ENST00000635227 WDR70Q9NW82 654 aa15.85■□□□□ 0.13
LINC01108-202ENST00000635227 OTUD5Q96G74 571 aa15.84■□□□□ 0.13
LINC01108-202ENST00000635227 FOXK1P85037 733 aa15.82■□□□□ 0.12
LINC01108-202ENST00000635227 PPP1R15BQ5SWA1 713 aa15.82■□□□□ 0.12
LINC01108-202ENST00000635227 SLAIN1Q8ND83 568 aa15.81■□□□□ 0.12
LINC01108-202ENST00000635227 PLPP6Q8IY26 295 aa15.78■□□□□ 0.12
LINC01108-202ENST00000635227 E2F4Q16254 413 aa15.73■□□□□ 0.11
LINC01108-202ENST00000635227 KCNV2Q8TDN2 545 aa15.71■□□□□ 0.11
LINC01108-202ENST00000635227 CAMK2BQ13554 666 aa15.7■□□□□ 0.1
LINC01108-202ENST00000635227 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
LINC01108-202ENST00000635227 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
LINC01108-202ENST00000635227 HOXB3P14651 431 aaPredicted RBP15.61■□□□□ 0.09
LINC01108-202ENST00000635227 UPF1Q92900 1129 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01108-202ENST00000635227 SLC34A2O95436 690 aa15.56■□□□□ 0.08
LINC01108-202ENST00000635227 OXER1Q8TDS5 423 aa15.56■□□□□ 0.08
LINC01108-202ENST00000635227 ARHGEF1Q92888 912 aaKnown RBP15.56■□□□□ 0.08
LINC01108-202ENST00000635227 DPYSL4O14531 572 aa15.55■□□□□ 0.08
LINC01108-202ENST00000635227 DOK7Q18PE1 504 aa15.54■□□□□ 0.08
LINC01108-202ENST00000635227 PTCD2Q8WV60 388 aaKnown RBP15.54■□□□□ 0.08
LINC01108-202ENST00000635227 ARIH1Q9Y4X5 557 aaPredicted RBP15.54■□□□□ 0.08
LINC01108-202ENST00000635227 SNPHO15079 494 aa15.5■□□□□ 0.07
LINC01108-202ENST00000635227 MAP3K9P80192 1104 aa15.5■□□□□ 0.07
LINC01108-202ENST00000635227 PCDHGA4Q9Y5G9 962 aa15.49■□□□□ 0.07
LINC01108-202ENST00000635227 ZNF710Q8N1W2 664 aa15.46■□□□□ 0.07
LINC01108-202ENST00000635227 ARSIQ5FYB1 569 aa15.45■□□□□ 0.06
LINC01108-202ENST00000635227 KHSRPQ92945 711 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC01108-202ENST00000635227 RIMBP2O15034 1052 aa15.44■□□□□ 0.06
LINC01108-202ENST00000635227 TBC1D12O60347 775 aa15.44■□□□□ 0.06
LINC01108-202ENST00000635227 GPR153Q6NV75 609 aa15.43■□□□□ 0.06
LINC01108-202ENST00000635227 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
LINC01108-202ENST00000635227 PDIA6Q15084 440 aa15.42■□□□□ 0.06
LINC01108-202ENST00000635227 NBR1Q14596 966 aa15.41■□□□□ 0.06
LINC01108-202ENST00000635227 EVI5O60447 810 aa15.4■□□□□ 0.06
LINC01108-202ENST00000635227 BCANQ96GW7 911 aa15.4■□□□□ 0.06
LINC01108-202ENST00000635227 SEMA3EO15041 775 aa15.39■□□□□ 0.05
LINC01108-202ENST00000635227 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
LINC01108-202ENST00000635227 SPDYE16A6NNV3 312 aaPredicted RBP15.38■□□□□ 0.05
LINC01108-202ENST00000635227 NUDT7P0C024 238 aa15.37■□□□□ 0.05
LINC01108-202ENST00000635227 ST18O60284 1047 aa15.35■□□□□ 0.05
LINC01108-202ENST00000635227 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
LINC01108-202ENST00000635227 HOXB1P14653 301 aaPredicted RBP15.34■□□□□ 0.05
LINC01108-202ENST00000635227 ANO8Q9HCE9 1232 aaPredicted RBP15.33■□□□□ 0.04
LINC01108-202ENST00000635227 MLLT3P42568 568 aaPredicted RBP15.31■□□□□ 0.04
LINC01108-202ENST00000635227 TESPA1A2RU30 521 aaPredicted RBP15.29■□□□□ 0.04
LINC01108-202ENST00000635227 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
LINC01108-202ENST00000635227 LCE2DQ5TA82 110 aaPredicted RBP15.29■□□□□ 0.04
LINC01108-202ENST00000635227 DDX12PQ92771 950 aa15.27■□□□□ 0.04
LINC01108-202ENST00000635227 PTGER2P43116 358 aa15.26■□□□□ 0.03
LINC01108-202ENST00000635227 LHX6Q9UPM6 363 aa15.25■□□□□ 0.03
LINC01108-202ENST00000635227 GRXCR2A6NFK2 248 aa15.24■□□□□ 0.03
LINC01108-202ENST00000635227 MARVELD3Q96A59 401 aa15.24■□□□□ 0.03
LINC01108-202ENST00000635227 EMP3P54852 163 aa15.18■□□□□ 0.02
LINC01108-202ENST00000635227 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
LINC01108-202ENST00000635227 FOSBP53539 338 aa15.17■□□□□ 0.02
LINC01108-202ENST00000635227 JPH4Q96JJ6 628 aa15.17■□□□□ 0.02
LINC01108-202ENST00000635227 PHF14O94880 888 aa15.16■□□□□ 0.02
LINC01108-202ENST00000635227 OSBPP22059 807 aa15.16■□□□□ 0.02
LINC01108-202ENST00000635227 ZNF454Q8N9F8 522 aa15.16■□□□□ 0.02
LINC01108-202ENST00000635227 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
LINC01108-202ENST00000635227 SMYD5Q6GMV2 418 aa15.15■□□□□ 0.02
LINC01108-202ENST00000635227 ERBB3P21860 1342 aa15.14■□□□□ 0.01
LINC01108-202ENST00000635227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC01108-202ENST00000635227 RBM26Q5T8P6 1007 aaKnown RBP15.12■□□□□ 0.01
LINC01108-202ENST00000635227 FAM205CA6NFA0 338 aa15.11■□□□□ 0.01
LINC01108-202ENST00000635227 VARS2Q5ST30 1063 aaKnown RBP15.11■□□□□ 0.01
LINC01108-202ENST00000635227 EPAS1Q99814 870 aa15.11■□□□□ 0.01
LINC01108-202ENST00000635227 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
LINC01108-202ENST00000635227 TYW1BQ6NUM6 668 aa15.1■□□□□ 0.01
LINC01108-202ENST00000635227 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
LINC01108-202ENST00000635227 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
LINC01108-202ENST00000635227 ZDHHC16Q969W1 377 aa15.09■□□□□ 0.01
LINC01108-202ENST00000635227 POTEB3A0JP26 581 aa15.08■□□□□ 0
LINC01108-202ENST00000635227 PPP4R3BQ5MIZ7 849 aa15.08■□□□□ 0
LINC01108-202ENST00000635227 POTEBQ6S5H4 581 aa15.08■□□□□ 0
LINC01108-202ENST00000635227 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
LINC01108-202ENST00000635227 EN1Q05925 392 aaPredicted RBP15.06■□□□□ 0
LINC01108-202ENST00000635227 FBXW7Q969H0 707 aa15.06■□□□□ 0
LINC01108-202ENST00000635227 ADAM33Q9BZ11 813 aa15.06■□□□□ 0
LINC01108-202ENST00000635227 HS3ST6Q96QI5 342 aa15.05■□□□□ -0
LINC01108-202ENST00000635227 MAP3K7O43318 606 aa15.02■□□□□ -0
LINC01108-202ENST00000635227 TSR1Q2NL82 804 aaKnown RBP15.02■□□□□ -0
LINC01108-202ENST00000635227 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
LINC01108-202ENST00000635227 CDHR5Q9HBB8 845 aa14.99□□□□□ -0.01
LINC01108-202ENST00000635227 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
LINC01108-202ENST00000635227 C6orf132Q5T0Z8 1188 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms