RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 MKRN3Q13064 507 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-220ENST00000634338 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
SMARCA2-220ENST00000634338 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
SMARCA2-220ENST00000634338 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-220ENST00000634338 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-220ENST00000634338 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-220ENST00000634338 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-220ENST00000634338 ILDR1Q86SU0 546 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-220ENST00000634338 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
SMARCA2-220ENST00000634338 PDIA6Q15084 440 aa12.62□□□□□ -0.39
SMARCA2-220ENST00000634338 TRIM66O15016 1216 aa12.61□□□□□ -0.39
SMARCA2-220ENST00000634338 DPYSL4O14531 572 aa12.6□□□□□ -0.39
SMARCA2-220ENST00000634338 PDE4DQ08499 809 aa12.59□□□□□ -0.39
SMARCA2-220ENST00000634338 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
SMARCA2-220ENST00000634338 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
SMARCA2-220ENST00000634338 TRPC6Q9Y210 931 aa12.59□□□□□ -0.39
SMARCA2-220ENST00000634338 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
SMARCA2-220ENST00000634338 TIE1P35590 1138 aa12.55□□□□□ -0.4
SMARCA2-220ENST00000634338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■□ 21
SMARCA2-220ENST00000634338 GPR37O15354 613 aa12.54□□□□□ -0.4
SMARCA2-220ENST00000634338 DSG2Q14126 1118 aa12.54□□□□□ -0.4
SMARCA2-220ENST00000634338 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
SMARCA2-220ENST00000634338 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
SMARCA2-220ENST00000634338 FOXK1P85037 733 aa12.5□□□□□ -0.41
SMARCA2-220ENST00000634338 EVX2Q03828 476 aa12.48□□□□□ -0.41
SMARCA2-220ENST00000634338 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
SMARCA2-220ENST00000634338 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
SMARCA2-220ENST00000634338 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
SMARCA2-220ENST00000634338 RSPH6AQ9H0K4 717 aa12.47□□□□□ -0.41
SMARCA2-220ENST00000634338 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
SMARCA2-220ENST00000634338 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
SMARCA2-220ENST00000634338 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
SMARCA2-220ENST00000634338 DPY19L2Q6NUT2 758 aa12.42□□□□□ -0.42
SMARCA2-220ENST00000634338 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
SMARCA2-220ENST00000634338 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
SMARCA2-220ENST00000634338 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
SMARCA2-220ENST00000634338 AMHR2Q16671 573 aa12.41□□□□□ -0.42
SMARCA2-220ENST00000634338 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
SMARCA2-220ENST00000634338 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-220ENST00000634338 C19orf67A6NJJ6 358 aa12.4□□□□□ -0.42
SMARCA2-220ENST00000634338 NUTM2FA1L443 756 aa12.39□□□□□ -0.43
SMARCA2-220ENST00000634338 PLEKHG3A1L390 1219 aa12.38□□□□□ -0.43
SMARCA2-220ENST00000634338 GRXCR2A6NFK2 248 aa12.38□□□□□ -0.43
SMARCA2-220ENST00000634338 IRF6O14896 467 aa12.38□□□□□ -0.43
SMARCA2-220ENST00000634338 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-220ENST00000634338 KIF3CO14782 793 aa12.36□□□□□ -0.43
SMARCA2-220ENST00000634338 GNPATO15228 680 aa12.36□□□□□ -0.43
SMARCA2-220ENST00000634338 MAP3K9P80192 1104 aa12.36□□□□□ -0.43
SMARCA2-220ENST00000634338 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
SMARCA2-220ENST00000634338 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
SMARCA2-220ENST00000634338 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
SMARCA2-220ENST00000634338 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
SMARCA2-220ENST00000634338 OSBPP22059 807 aa12.34□□□□□ -0.43
SMARCA2-220ENST00000634338 HIC1Q14526 733 aa12.34□□□□□ -0.43
SMARCA2-220ENST00000634338 FCHSD2O94868 740 aa12.33□□□□□ -0.44
SMARCA2-220ENST00000634338 PTGER2P43116 358 aa12.32□□□□□ -0.44
SMARCA2-220ENST00000634338 FLIIQ13045 1269 aa12.31□□□□□ -0.44
SMARCA2-220ENST00000634338 LHX8Q68G74 356 aa12.31□□□□□ -0.44
SMARCA2-220ENST00000634338 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
SMARCA2-220ENST00000634338 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
SMARCA2-220ENST00000634338 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
SMARCA2-220ENST00000634338 G3V3G9 751 aa12.27□□□□□ -0.45
SMARCA2-220ENST00000634338 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
SMARCA2-220ENST00000634338 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-220ENST00000634338 FECHP22830 423 aa12.26□□□□□ -0.45
SMARCA2-220ENST00000634338 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCA2-220ENST00000634338 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
SMARCA2-220ENST00000634338 IER5LQ5T953 404 aa12.25□□□□□ -0.45
SMARCA2-220ENST00000634338 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
SMARCA2-220ENST00000634338 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
SMARCA2-220ENST00000634338 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
SMARCA2-220ENST00000634338 DDX12PQ92771 950 aa12.23□□□□□ -0.45
SMARCA2-220ENST00000634338 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-220ENST00000634338 CLCN6P51797 869 aa12.22□□□□□ -0.45
SMARCA2-220ENST00000634338 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
SMARCA2-220ENST00000634338 PTGDRQ13258 359 aa12.22□□□□□ -0.45
SMARCA2-220ENST00000634338 TBC1D12O60347 775 aa12.21□□□□□ -0.45
SMARCA2-220ENST00000634338 GABBR2O75899 941 aa12.21□□□□□ -0.45
SMARCA2-220ENST00000634338 GIGYF2Q6Y7W6 1299 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-220ENST00000634338 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-220ENST00000634338 PCMTD1Q96MG8 357 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-220ENST00000634338 ARID3AQ99856 593 aa12.18□□□□□ -0.46
SMARCA2-220ENST00000634338 EVI5O60447 810 aa12.17□□□□□ -0.46
SMARCA2-220ENST00000634338 MS4A1P11836 297 aa12.17□□□□□ -0.46
SMARCA2-220ENST00000634338 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-220ENST00000634338 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
SMARCA2-220ENST00000634338 TMEM92Q6UXU6 159 aa12.16□□□□□ -0.46
SMARCA2-220ENST00000634338 A6NJR5 290 aa12.15□□□□□ -0.46
SMARCA2-220ENST00000634338 APBB1O00213 710 aa12.15□□□□□ -0.46
SMARCA2-220ENST00000634338 PLCG2P16885 1265 aa12.15□□□□□ -0.46
SMARCA2-220ENST00000634338 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
SMARCA2-220ENST00000634338 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
SMARCA2-220ENST00000634338 SH3D19Q5HYK7 790 aa12.13□□□□□ -0.47
SMARCA2-220ENST00000634338 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-220ENST00000634338 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
SMARCA2-220ENST00000634338 CLCN1P35523 988 aa12.1□□□□□ -0.47
SMARCA2-220ENST00000634338 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-220ENST00000634338 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-220ENST00000634338 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-220ENST00000634338 ANO8Q9HCE9 1232 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms