RNA–Protein interactions for RNA: ENST00000630319.2

TCF4-271, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-271ENST00000630319 G3V3G9 751 aa14.3□□□□□ -0.12
TCF4-271ENST00000630319 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
TCF4-271ENST00000630319 MFSD10Q14728 455 aa14.28□□□□□ -0.12
TCF4-271ENST00000630319 KIF3CO14782 793 aa14.27□□□□□ -0.13
TCF4-271ENST00000630319 PDE4AP27815 886 aa14.27□□□□□ -0.13
TCF4-271ENST00000630319 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
TCF4-271ENST00000630319 LARP6Q9BRS8 491 aaKnown RBP14.24□□□□□ -0.13
TCF4-271ENST00000630319 C2orf72A6NCS6 295 aa14.21□□□□□ -0.13
TCF4-271ENST00000630319 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
TCF4-271ENST00000630319 TMC2Q8TDI7 906 aa14.19□□□□□ -0.14
TCF4-271ENST00000630319 DDX27Q96GQ7 796 aaKnown RBP14.19□□□□□ -0.14
TCF4-271ENST00000630319 FOXK1P85037 733 aa14.18□□□□□ -0.14
TCF4-271ENST00000630319 DSG2Q14126 1118 aa14.17□□□□□ -0.14
TCF4-271ENST00000630319 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.17□□□□□ -0.14
TCF4-271ENST00000630319 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
TCF4-271ENST00000630319 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
TCF4-271ENST00000630319 CAMK2BQ13554 666 aa14.13□□□□□ -0.15
TCF4-271ENST00000630319 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
TCF4-271ENST00000630319 E2F4Q16254 413 aa14.1□□□□□ -0.15
TCF4-271ENST00000630319 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
TCF4-271ENST00000630319 SCUBE2Q9NQ36 999 aa14.1□□□□□ -0.15
TCF4-271ENST00000630319 LHX8Q68G74 356 aa14.09□□□□□ -0.15
TCF4-271ENST00000630319 PLPP6Q8IY26 295 aa14.09□□□□□ -0.15
TCF4-271ENST00000630319 OTUD5Q96G74 571 aa14.08□□□□□ -0.16
TCF4-271ENST00000630319 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
TCF4-271ENST00000630319 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
TCF4-271ENST00000630319 ARIH1Q9Y4X5 557 aaPredicted RBP14.03□□□□□ -0.16
TCF4-271ENST00000630319 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
TCF4-271ENST00000630319 ARHGEF1Q92888 912 aaKnown RBP14□□□□□ -0.17
TCF4-271ENST00000630319 SLC34A2O95436 690 aa13.97□□□□□ -0.17
TCF4-271ENST00000630319 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
TCF4-271ENST00000630319 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
TCF4-271ENST00000630319 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
TCF4-271ENST00000630319 BCANQ96GW7 911 aa13.9□□□□□ -0.18
TCF4-271ENST00000630319 DPYSL4O14531 572 aa13.89□□□□□ -0.19
TCF4-271ENST00000630319 UPF1Q92900 1129 aaKnown RBP eCLIP13.87□□□□□ -0.19
TCF4-271ENST00000630319 PDIA6Q15084 440 aa13.85□□□□□ -0.19
TCF4-271ENST00000630319 DOK7Q18PE1 504 aa13.84□□□□□ -0.19
TCF4-271ENST00000630319 NBR1Q14596 966 aa13.83□□□□□ -0.2
TCF4-271ENST00000630319 PCDHGA4Q9Y5G9 962 aa13.83□□□□□ -0.2
TCF4-271ENST00000630319 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
TCF4-271ENST00000630319 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
TCF4-271ENST00000630319 MAP3K9P80192 1104 aa13.81□□□□□ -0.2
TCF4-271ENST00000630319 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
TCF4-271ENST00000630319 SEMA3EO15041 775 aa13.79□□□□□ -0.2
TCF4-271ENST00000630319 SNPHO15079 494 aa13.79□□□□□ -0.2
TCF4-271ENST00000630319 GPR153Q6NV75 609 aa13.79□□□□□ -0.2
TCF4-271ENST00000630319 TBC1D12O60347 775 aa13.78□□□□□ -0.2
TCF4-271ENST00000630319 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
TCF4-271ENST00000630319 EVI5O60447 810 aa13.76□□□□□ -0.21
TCF4-271ENST00000630319 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
TCF4-271ENST00000630319 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
TCF4-271ENST00000630319 ARSIQ5FYB1 569 aa13.74□□□□□ -0.21
TCF4-271ENST00000630319 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 17.4
TCF4-271ENST00000630319 PTGER2P43116 358 aa13.72□□□□□ -0.21
TCF4-271ENST00000630319 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
TCF4-271ENST00000630319 ZNF710Q8N1W2 664 aa13.71□□□□□ -0.21
TCF4-271ENST00000630319 HOXB1P14653 301 aaPredicted RBP13.7□□□□□ -0.22
TCF4-271ENST00000630319 NUDT7P0C024 238 aa13.68□□□□□ -0.22
TCF4-271ENST00000630319 ST18O60284 1047 aa13.64□□□□□ -0.23
TCF4-271ENST00000630319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCF4-271ENST00000630319 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
TCF4-271ENST00000630319 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
TCF4-271ENST00000630319 DDX12PQ92771 950 aa13.61□□□□□ -0.23
TCF4-271ENST00000630319 OSBPP22059 807 aa13.6□□□□□ -0.23
TCF4-271ENST00000630319 SMYD5Q6GMV2 418 aa13.59□□□□□ -0.23
TCF4-271ENST00000630319 GRXCR2A6NFK2 248 aa13.58□□□□□ -0.24
TCF4-271ENST00000630319 PHF14O94880 888 aa13.58□□□□□ -0.24
TCF4-271ENST00000630319 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
TCF4-271ENST00000630319 FOSBP53539 338 aa13.58□□□□□ -0.24
TCF4-271ENST00000630319 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
TCF4-271ENST00000630319 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
TCF4-271ENST00000630319 PCDHGA10Q9Y5H3 936 aa13.57□□□□□ -0.24
TCF4-271ENST00000630319 LMOD2Q6P5Q4 547 aa13.56□□□□□ -0.24
TCF4-271ENST00000630319 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
TCF4-271ENST00000630319 EPAS1Q99814 870 aa13.54□□□□□ -0.24
TCF4-271ENST00000630319 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
TCF4-271ENST00000630319 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
TCF4-271ENST00000630319 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
TCF4-271ENST00000630319 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
TCF4-271ENST00000630319 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
TCF4-271ENST00000630319 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
TCF4-271ENST00000630319 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
TCF4-271ENST00000630319 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
TCF4-271ENST00000630319 ZDHHC16Q969W1 377 aa13.47□□□□□ -0.25
TCF4-271ENST00000630319 EMP3P54852 163 aa13.46□□□□□ -0.25
TCF4-271ENST00000630319 ADAM33Q9BZ11 813 aa13.45□□□□□ -0.26
TCF4-271ENST00000630319 GPR37O15354 613 aa13.44□□□□□ -0.26
TCF4-271ENST00000630319 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
TCF4-271ENST00000630319 ERBB3P21860 1342 aa13.43□□□□□ -0.26
TCF4-271ENST00000630319 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
TCF4-271ENST00000630319 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
TCF4-271ENST00000630319 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
TCF4-271ENST00000630319 BCL2L12Q9HB09 334 aa13.42□□□□□ -0.26
TCF4-271ENST00000630319 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
TCF4-271ENST00000630319 ZC3H15Q8WU90 426 aaKnown RBP13.41□□□□□ -0.26
TCF4-271ENST00000630319 RBM33Q96EV2 1170 aaKnown RBP13.41□□□□□ -0.26
TCF4-271ENST00000630319 MAP3K7O43318 606 aa13.4□□□□□ -0.26
TCF4-271ENST00000630319 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
TCF4-271ENST00000630319 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms