RNA–Protein interactions for RNA: ENST00000629303.2

UBE2A-209, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 4

Gene UBE2A, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-209ENST00000629303 PLCH2O75038 1416 aa18.02■□□□□ 0.48
UBE2A-209ENST00000629303 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
UBE2A-209ENST00000629303 ARHGEF12Q9NZN5 1544 aa17.98■□□□□ 0.47
UBE2A-209ENST00000629303 HSPA2P54652 639 aa17.98■□□□□ 0.47
UBE2A-209ENST00000629303 KDM5CP41229 1560 aa17.97■□□□□ 0.47
UBE2A-209ENST00000629303 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
UBE2A-209ENST00000629303 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
UBE2A-209ENST00000629303 FMN1Q68DA7 1419 aa17.95■□□□□ 0.46
UBE2A-209ENST00000629303 DIP2CQ9Y2E4 1556 aa17.95■□□□□ 0.46
UBE2A-209ENST00000629303 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
UBE2A-209ENST00000629303 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
UBE2A-209ENST00000629303 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
UBE2A-209ENST00000629303 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
UBE2A-209ENST00000629303 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
UBE2A-209ENST00000629303 MLECQ14165 292 aa17.92■□□□□ 0.46
UBE2A-209ENST00000629303 PREX2Q70Z35 1606 aa17.91■□□□□ 0.46
UBE2A-209ENST00000629303 ATP10AO60312 1499 aa17.91■□□□□ 0.46
UBE2A-209ENST00000629303 FBXO41Q8TF61 875 aa17.91■□□□□ 0.46
UBE2A-209ENST00000629303 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
UBE2A-209ENST00000629303 ABCC1P33527 1531 aa17.89■□□□□ 0.45
UBE2A-209ENST00000629303 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
UBE2A-209ENST00000629303 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
UBE2A-209ENST00000629303 ATP1B4Q9UN42 357 aaPredicted RBP17.88■□□□□ 0.45
UBE2A-209ENST00000629303 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
UBE2A-209ENST00000629303 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
UBE2A-209ENST00000629303 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
UBE2A-209ENST00000629303 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
UBE2A-209ENST00000629303 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
UBE2A-209ENST00000629303 STRCQ7RTU9 1775 aa17.84■□□□□ 0.45
UBE2A-209ENST00000629303 REREQ9P2R6 1566 aa17.84■□□□□ 0.45
UBE2A-209ENST00000629303 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
UBE2A-209ENST00000629303 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
UBE2A-209ENST00000629303 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
UBE2A-209ENST00000629303 EFCAB2Q5VUJ9 269 aa17.82■□□□□ 0.44
UBE2A-209ENST00000629303 C3P01024 1663 aa17.81■□□□□ 0.44
UBE2A-209ENST00000629303 SAMD9LQ8IVG5 1584 aa17.8■□□□□ 0.44
UBE2A-209ENST00000629303 CLIP1P30622 1438 aa17.8■□□□□ 0.44
UBE2A-209ENST00000629303 MLH3Q9UHC1 1453 aa17.79■□□□□ 0.44
UBE2A-209ENST00000629303 CCDC18Q5T9S5 1454 aa17.77■□□□□ 0.44
UBE2A-209ENST00000629303 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.43
UBE2A-209ENST00000629303 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
UBE2A-209ENST00000629303 AGLP35573 1532 aa17.76■□□□□ 0.43
UBE2A-209ENST00000629303 CDK11AQ9UQ88 783 aaPredicted RBP17.73■□□□□ 0.43
UBE2A-209ENST00000629303 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.43
UBE2A-209ENST00000629303 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
UBE2A-209ENST00000629303 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
UBE2A-209ENST00000629303 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
UBE2A-209ENST00000629303 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
UBE2A-209ENST00000629303 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
UBE2A-209ENST00000629303 ATP7AQ04656 1500 aa17.66■□□□□ 0.42
UBE2A-209ENST00000629303 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
UBE2A-209ENST00000629303 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
UBE2A-209ENST00000629303 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
UBE2A-209ENST00000629303 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
UBE2A-209ENST00000629303 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
UBE2A-209ENST00000629303 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
UBE2A-209ENST00000629303 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
UBE2A-209ENST00000629303 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBE2A-209ENST00000629303 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
UBE2A-209ENST00000629303 ZNF142P52746 1687 aaPredicted RBP17.59■□□□□ 0.41
UBE2A-209ENST00000629303 SETD1BQ9UPS6 1966 aaKnown RBP17.59■□□□□ 0.41
UBE2A-209ENST00000629303 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.41
UBE2A-209ENST00000629303 PTPRTO14522 1441 aa17.58■□□□□ 0.41
UBE2A-209ENST00000629303 ZNF644Q9H582 1327 aaPredicted RBP17.57■□□□□ 0.4
UBE2A-209ENST00000629303 A2MP01023 1474 aa17.56■□□□□ 0.4
UBE2A-209ENST00000629303 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
UBE2A-209ENST00000629303 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
UBE2A-209ENST00000629303 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
UBE2A-209ENST00000629303 ADGBQ8N7X0 1667 aa17.56■□□□□ 0.4
UBE2A-209ENST00000629303 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
UBE2A-209ENST00000629303 EHBP1L1Q8N3D4 1523 aa17.55■□□□□ 0.4
UBE2A-209ENST00000629303 NPATQ14207 1427 aa17.55■□□□□ 0.4
UBE2A-209ENST00000629303 PTPRKQ15262 1439 aa17.54■□□□□ 0.4
UBE2A-209ENST00000629303 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
UBE2A-209ENST00000629303 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
UBE2A-209ENST00000629303 CCNB3Q8WWL7 1395 aa17.53■□□□□ 0.4
UBE2A-209ENST00000629303 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
UBE2A-209ENST00000629303 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
UBE2A-209ENST00000629303 ILDR2Q71H61 639 aa17.49■□□□□ 0.39
UBE2A-209ENST00000629303 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
UBE2A-209ENST00000629303 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
UBE2A-209ENST00000629303 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
UBE2A-209ENST00000629303 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
UBE2A-209ENST00000629303 SPATA31D1Q6ZQQ2 1576 aa17.46■□□□□ 0.39
UBE2A-209ENST00000629303 NEURL4Q96JN8 1562 aa17.46■□□□□ 0.39
UBE2A-209ENST00000629303 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
UBE2A-209ENST00000629303 ZNF335Q9H4Z2 1342 aaPredicted RBP17.46■□□□□ 0.38
UBE2A-209ENST00000629303 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
UBE2A-209ENST00000629303 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
UBE2A-209ENST00000629303 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
UBE2A-209ENST00000629303 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
UBE2A-209ENST00000629303 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
UBE2A-209ENST00000629303 IQSEC2Q5JU85 1478 aa17.43■□□□□ 0.38
UBE2A-209ENST00000629303 GGT6Q6P531 493 aa17.42■□□□□ 0.38
UBE2A-209ENST00000629303 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
UBE2A-209ENST00000629303 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
UBE2A-209ENST00000629303 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
UBE2A-209ENST00000629303 A2ML1A8K2U0 1454 aa17.39■□□□□ 0.37
UBE2A-209ENST00000629303 KDM5DQ9BY66 1539 aa17.39■□□□□ 0.37
UBE2A-209ENST00000629303 POLR1AO95602 1720 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms