RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
CHD2-216ENST00000629104 MAP3K1Q13233 1512 aa14.04□□□□□ -0.16
CHD2-216ENST00000629104 ARHGAP5Q13017 1502 aa14.01□□□□□ -0.17
CHD2-216ENST00000629104 AKNAQ7Z591 1439 aa14.01□□□□□ -0.17
CHD2-216ENST00000629104 SUPT6HQ7KZ85 1726 aaKnown RBP14.01□□□□□ -0.17
CHD2-216ENST00000629104 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
CHD2-216ENST00000629104 FRMPD1Q5SYB0 1578 aa13.99□□□□□ -0.17
CHD2-216ENST00000629104 RICTORQ6R327 1708 aa13.98□□□□□ -0.17
CHD2-216ENST00000629104 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
CHD2-216ENST00000629104 GPATCH8Q9UKJ3 1502 aaKnown RBP13.98□□□□□ -0.17
CHD2-216ENST00000629104 ITSN2Q9NZM3 1697 aa13.98□□□□□ -0.17
CHD2-216ENST00000629104 ADGRL1O94910 1474 aa13.97□□□□□ -0.17
CHD2-216ENST00000629104 DENND4BO75064 1496 aaPredicted RBP13.96□□□□□ -0.17
CHD2-216ENST00000629104 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
CHD2-216ENST00000629104 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.18
CHD2-216ENST00000629104 RAPGEF3O95398 923 aa13.95□□□□□ -0.18
CHD2-216ENST00000629104 APLP2Q06481 763 aa13.95□□□□□ -0.18
CHD2-216ENST00000629104 KANK4Q5T7N3 995 aaPredicted RBP13.95□□□□□ -0.18
CHD2-216ENST00000629104 SAMD9LQ8IVG5 1584 aa13.94□□□□□ -0.18
CHD2-216ENST00000629104 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
CHD2-216ENST00000629104 ABCC1P33527 1531 aa13.94□□□□□ -0.18
CHD2-216ENST00000629104 POGZQ7Z3K3 1410 aa13.92□□□□□ -0.18
CHD2-216ENST00000629104 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
CHD2-216ENST00000629104 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
CHD2-216ENST00000629104 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.19
CHD2-216ENST00000629104 KDM5CP41229 1560 aa13.89□□□□□ -0.19
CHD2-216ENST00000629104 ZNF518AQ6AHZ1 1483 aa13.89□□□□□ -0.19
CHD2-216ENST00000629104 ZNF777Q9ULD5 760 aaPredicted RBP13.89□□□□□ -0.19
CHD2-216ENST00000629104 ARHGEF40Q8TER5 1519 aa13.88□□□□□ -0.19
CHD2-216ENST00000629104 SYCP2Q9BX26 1530 aa13.88□□□□□ -0.19
CHD2-216ENST00000629104 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
CHD2-216ENST00000629104 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
CHD2-216ENST00000629104 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
CHD2-216ENST00000629104 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
CHD2-216ENST00000629104 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
CHD2-216ENST00000629104 TRAPPC8Q9Y2L5 1435 aa13.86□□□□□ -0.19
CHD2-216ENST00000629104 HECW2Q9P2P5 1572 aa13.85□□□□□ -0.19
CHD2-216ENST00000629104 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
CHD2-216ENST00000629104 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
CHD2-216ENST00000629104 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
CHD2-216ENST00000629104 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
CHD2-216ENST00000629104 YEATS2Q9ULM3 1422 aa13.83□□□□□ -0.2
CHD2-216ENST00000629104 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHD2-216ENST00000629104 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
CHD2-216ENST00000629104 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
CHD2-216ENST00000629104 MLH3Q9UHC1 1453 aa13.82□□□□□ -0.2
CHD2-216ENST00000629104 KIDINS220Q9ULH0 1771 aa13.82□□□□□ -0.2
CHD2-216ENST00000629104 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
CHD2-216ENST00000629104 ABCA6Q8N139 1617 aa13.8□□□□□ -0.2
CHD2-216ENST00000629104 SIGLEC1Q9BZZ2 1709 aa13.8□□□□□ -0.2
CHD2-216ENST00000629104 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
CHD2-216ENST00000629104 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
CHD2-216ENST00000629104 ADRA2BP18089 450 aa13.79□□□□□ -0.2
CHD2-216ENST00000629104 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
CHD2-216ENST00000629104 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
CHD2-216ENST00000629104 ATP10AO60312 1499 aa13.78□□□□□ -0.2
CHD2-216ENST00000629104 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
CHD2-216ENST00000629104 ATP7AQ04656 1500 aa13.78□□□□□ -0.2
CHD2-216ENST00000629104 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
CHD2-216ENST00000629104 C9orf84Q5VXU9 1444 aa13.77□□□□□ -0.21
CHD2-216ENST00000629104 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
CHD2-216ENST00000629104 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
CHD2-216ENST00000629104 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
CHD2-216ENST00000629104 KDM4FA0A1W2PPD8 638 aa13.76□□□□□ -0.21
CHD2-216ENST00000629104 TCOF1Q13428 1488 aaKnown RBP13.75□□□□□ -0.21
CHD2-216ENST00000629104 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
CHD2-216ENST00000629104 RTEL1-TNFRSF6BF6WH68 1400 aa13.73□□□□□ -0.21
CHD2-216ENST00000629104 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
CHD2-216ENST00000629104 ADAMTSL3P82987 1691 aa13.73□□□□□ -0.21
CHD2-216ENST00000629104 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
CHD2-216ENST00000629104 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
CHD2-216ENST00000629104 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
CHD2-216ENST00000629104 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
CHD2-216ENST00000629104 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
CHD2-216ENST00000629104 PLXNC1O60486 1568 aa13.71□□□□□ -0.22
CHD2-216ENST00000629104 AGLP35573 1532 aa13.7□□□□□ -0.22
CHD2-216ENST00000629104 MADDQ8WXG6 1647 aa13.69□□□□□ -0.22
CHD2-216ENST00000629104 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
CHD2-216ENST00000629104 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
CHD2-216ENST00000629104 ABCC5O15440 1437 aa13.69□□□□□ -0.22
CHD2-216ENST00000629104 A2MP01023 1474 aa13.68□□□□□ -0.22
CHD2-216ENST00000629104 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
CHD2-216ENST00000629104 DAPK1P53355 1430 aa13.68□□□□□ -0.22
CHD2-216ENST00000629104 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
CHD2-216ENST00000629104 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
CHD2-216ENST00000629104 MLECQ14165 292 aa13.65□□□□□ -0.22
CHD2-216ENST00000629104 FAM50AQ14320 339 aaKnown RBP13.65□□□□□ -0.22
CHD2-216ENST00000629104 DHX29Q7Z478 1369 aaKnown RBP13.64□□□□□ -0.23
CHD2-216ENST00000629104 PTPRMP28827 1452 aa13.62□□□□□ -0.23
CHD2-216ENST00000629104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD2-216ENST00000629104 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
CHD2-216ENST00000629104 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
CHD2-216ENST00000629104 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
CHD2-216ENST00000629104 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
CHD2-216ENST00000629104 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
CHD2-216ENST00000629104 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
CHD2-216ENST00000629104 KIF15Q9NS87 1388 aa13.58□□□□□ -0.23
CHD2-216ENST00000629104 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
CHD2-216ENST00000629104 NCOA1Q15788 1441 aa13.58□□□□□ -0.24
CHD2-216ENST00000629104 CHIC2Q9UKJ5 165 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms