RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 ARID4BQ4LE39 1312 aaPredicted RBP25.41■■□□□ 1.66
CHRNA4-211ENST00000628606 MTUS2Q5JR59 1369 aa25.36■■□□□ 1.65
CHRNA4-211ENST00000628606 POGZQ7Z3K3 1410 aa25.36■■□□□ 1.65
CHRNA4-211ENST00000628606 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
CHRNA4-211ENST00000628606 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
CHRNA4-211ENST00000628606 MAGI2Q86UL8 1455 aa25.34■■□□□ 1.65
CHRNA4-211ENST00000628606 CDC42BPBQ9Y5S2 1711 aa25.34■■□□□ 1.65
CHRNA4-211ENST00000628606 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
CHRNA4-211ENST00000628606 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
CHRNA4-211ENST00000628606 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
CHRNA4-211ENST00000628606 ZNF518AQ6AHZ1 1483 aa25.3■■□□□ 1.64
CHRNA4-211ENST00000628606 CDC42BPAQ5VT25 1732 aa25.29■■□□□ 1.64
CHRNA4-211ENST00000628606 ZNF777Q9ULD5 760 aaPredicted RBP25.28■■□□□ 1.64
CHRNA4-211ENST00000628606 AFAP1Q8N556 730 aa25.27■■□□□ 1.64
CHRNA4-211ENST00000628606 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
CHRNA4-211ENST00000628606 YEATS2Q9ULM3 1422 aa25.27■■□□□ 1.64
CHRNA4-211ENST00000628606 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
CHRNA4-211ENST00000628606 CFDP1Q9UEE9 299 aaPredicted RBP25.23■■□□□ 1.63
CHRNA4-211ENST00000628606 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
CHRNA4-211ENST00000628606 GPATCH8Q9UKJ3 1502 aaKnown RBP25.22■■□□□ 1.63
CHRNA4-211ENST00000628606 ADAMTSL3P82987 1691 aa25.22■■□□□ 1.63
CHRNA4-211ENST00000628606 ATP10AO60312 1499 aa25.21■■□□□ 1.63
CHRNA4-211ENST00000628606 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
CHRNA4-211ENST00000628606 ABCC1P33527 1531 aa25.21■■□□□ 1.63
CHRNA4-211ENST00000628606 KDM5CP41229 1560 aa25.19■■□□□ 1.62
CHRNA4-211ENST00000628606 ITSN2Q9NZM3 1697 aa25.18■■□□□ 1.62
CHRNA4-211ENST00000628606 C9orf84Q5VXU9 1444 aa25.18■■□□□ 1.62
CHRNA4-211ENST00000628606 HECW2Q9P2P5 1572 aa25.17■■□□□ 1.62
CHRNA4-211ENST00000628606 MLECQ14165 292 aa25.16■■□□□ 1.62
CHRNA4-211ENST00000628606 TRAPPC8Q9Y2L5 1435 aa25.16■■□□□ 1.62
CHRNA4-211ENST00000628606 ARHGEF12Q9NZN5 1544 aa25.16■■□□□ 1.62
CHRNA4-211ENST00000628606 PTPRMP28827 1452 aa25.15■■□□□ 1.62
CHRNA4-211ENST00000628606 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
CHRNA4-211ENST00000628606 MADDQ8WXG6 1647 aa25.14■■□□□ 1.61
CHRNA4-211ENST00000628606 MLH3Q9UHC1 1453 aa25.14■■□□□ 1.61
CHRNA4-211ENST00000628606 SAMD9LQ8IVG5 1584 aa25.14■■□□□ 1.61
CHRNA4-211ENST00000628606 HNRNPMP52272 730 aaKnown RBP eCLIP25.13■■□□□ 1.61
CHRNA4-211ENST00000628606 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
CHRNA4-211ENST00000628606 SUPT6HQ7KZ85 1726 aaKnown RBP25.11■■□□□ 1.61
CHRNA4-211ENST00000628606 SYCP2Q9BX26 1530 aa25.11■■□□□ 1.61
CHRNA4-211ENST00000628606 KIAA1107Q9UPP5 1409 aa25.11■■□□□ 1.61
CHRNA4-211ENST00000628606 APLP2Q06481 763 aa25.09■■□□□ 1.61
CHRNA4-211ENST00000628606 RIMS1Q86UR5 1692 aaKnown RBP25.09■■□□□ 1.61
CHRNA4-211ENST00000628606 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
CHRNA4-211ENST00000628606 SIGLEC1Q9BZZ2 1709 aa25.09■■□□□ 1.61
CHRNA4-211ENST00000628606 DIP2CQ9Y2E4 1556 aa25.07■■□□□ 1.6
CHRNA4-211ENST00000628606 NCOA2Q15596 1464 aa25.06■■□□□ 1.6
CHRNA4-211ENST00000628606 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
CHRNA4-211ENST00000628606 ABCA6Q8N139 1617 aa25.04■■□□□ 1.6
CHRNA4-211ENST00000628606 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
CHRNA4-211ENST00000628606 FER1L4A9Z1Z3 1794 aa25.03■■□□□ 1.6
CHRNA4-211ENST00000628606 KIDINS220Q9ULH0 1771 aa25.03■■□□□ 1.6
CHRNA4-211ENST00000628606 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
CHRNA4-211ENST00000628606 REREQ9P2R6 1566 aa25.02■■□□□ 1.6
CHRNA4-211ENST00000628606 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
CHRNA4-211ENST00000628606 ESF1Q9H501 851 aaKnown RBP25■■□□□ 1.59
CHRNA4-211ENST00000628606 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
CHRNA4-211ENST00000628606 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
CHRNA4-211ENST00000628606 AGLP35573 1532 aa24.96■■□□□ 1.59
CHRNA4-211ENST00000628606 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.58
CHRNA4-211ENST00000628606 MBD5Q9P267 1494 aa24.93■■□□□ 1.58
CHRNA4-211ENST00000628606 CAMSAP2Q08AD1 1489 aa24.92■■□□□ 1.58
CHRNA4-211ENST00000628606 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
CHRNA4-211ENST00000628606 A2MP01023 1474 aa24.89■■□□□ 1.57
CHRNA4-211ENST00000628606 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.57
CHRNA4-211ENST00000628606 RTEL1-TNFRSF6BF6WH68 1400 aa24.88■■□□□ 1.57
CHRNA4-211ENST00000628606 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
CHRNA4-211ENST00000628606 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
CHRNA4-211ENST00000628606 CEBPAP49715 358 aaPredicted RBP24.87■■□□□ 1.57
CHRNA4-211ENST00000628606 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
CHRNA4-211ENST00000628606 MYOM3Q5VTT5 1437 aa24.85■■□□□ 1.57
CHRNA4-211ENST00000628606 MIA2Q96PC5 1412 aa24.83■■□□□ 1.57
CHRNA4-211ENST00000628606 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
CHRNA4-211ENST00000628606 LMTK3Q96Q04 1460 aa24.83■■□□□ 1.56
CHRNA4-211ENST00000628606 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
CHRNA4-211ENST00000628606 GGT6Q6P531 493 aa24.81■■□□□ 1.56
CHRNA4-211ENST00000628606 SETD1BQ9UPS6 1966 aaKnown RBP24.8■■□□□ 1.56
CHRNA4-211ENST00000628606 PLXNC1O60486 1568 aa24.8■■□□□ 1.56
CHRNA4-211ENST00000628606 DHX29Q7Z478 1369 aaKnown RBP24.79■■□□□ 1.56
CHRNA4-211ENST00000628606 HSPA2P54652 639 aa24.76■■□□□ 1.55
CHRNA4-211ENST00000628606 PPP6R1Q9UPN7 881 aa24.76■■□□□ 1.55
CHRNA4-211ENST00000628606 C3P01024 1663 aa24.75■■□□□ 1.55
CHRNA4-211ENST00000628606 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
CHRNA4-211ENST00000628606 KIF3BO15066 747 aa24.73■■□□□ 1.55
CHRNA4-211ENST00000628606 UHRF1BP1Q6BDS2 1440 aa24.72■■□□□ 1.55
CHRNA4-211ENST00000628606 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
CHRNA4-211ENST00000628606 MROH2AA6NES4 1674 aa24.71■■□□□ 1.55
CHRNA4-211ENST00000628606 CLTCQ00610 1675 aaKnown RBP24.69■■□□□ 1.54
CHRNA4-211ENST00000628606 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
CHRNA4-211ENST00000628606 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
CHRNA4-211ENST00000628606 FGD6Q6ZV73 1430 aa24.66■■□□□ 1.54
CHRNA4-211ENST00000628606 NPATQ14207 1427 aa24.64■■□□□ 1.54
CHRNA4-211ENST00000628606 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
CHRNA4-211ENST00000628606 TCOF1Q13428 1488 aaKnown RBP24.59■■□□□ 1.53
CHRNA4-211ENST00000628606 ABCC5O15440 1437 aa24.59■■□□□ 1.53
CHRNA4-211ENST00000628606 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.52
CHRNA4-211ENST00000628606 FAM135AQ9P2D6 1515 aa24.57■■□□□ 1.52
CHRNA4-211ENST00000628606 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
CHRNA4-211ENST00000628606 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
CHRNA4-211ENST00000628606 DAPK1P53355 1430 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms