RNA–Protein interactions for RNA: ENST00000627585.2

TNPO3-205, Transcript of transportin 3, humanhuman

TSL 2 BASIC

Gene TNPO3, Length 4,514 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-205ENST00000627585 SIN3AQ96ST3 1273 aa12.52□□□□□ -0.41
TNPO3-205ENST00000627585 ARHGAP5Q13017 1502 aa12.51□□□□□ -0.41
TNPO3-205ENST00000627585 UGGT2Q9NYU1 1516 aa12.51□□□□□ -0.41
TNPO3-205ENST00000627585 PKD2Q13563 968 aa12.5□□□□□ -0.41
TNPO3-205ENST00000627585 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
TNPO3-205ENST00000627585 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
TNPO3-205ENST00000627585 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
TNPO3-205ENST00000627585 SENP3Q9H4L4 574 aaPredicted RBP12.48□□□□□ -0.41
TNPO3-205ENST00000627585 MYT1Q01538 1121 aa12.48□□□□□ -0.41
TNPO3-205ENST00000627585 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
TNPO3-205ENST00000627585 FOXD1Q16676 465 aa12.47□□□□□ -0.41
TNPO3-205ENST00000627585 SUPT6HQ7KZ85 1726 aaKnown RBP12.46□□□□□ -0.41
TNPO3-205ENST00000627585 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
TNPO3-205ENST00000627585 MIA2Q96PC5 1412 aa12.45□□□□□ -0.42
TNPO3-205ENST00000627585 CEP170Q5SW79 1584 aa12.45□□□□□ -0.42
TNPO3-205ENST00000627585 WASHC2CQ9Y4E1 1318 aa12.44□□□□□ -0.42
TNPO3-205ENST00000627585 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
TNPO3-205ENST00000627585 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
TNPO3-205ENST00000627585 RRBP1Q9P2E9 1410 aaKnown RBP12.43□□□□□ -0.42
TNPO3-205ENST00000627585 ARHGEF11O15085 1522 aa12.43□□□□□ -0.42
TNPO3-205ENST00000627585 ANP32CO43423 234 aa12.43□□□□□ -0.42
TNPO3-205ENST00000627585 KIF15Q9NS87 1388 aa12.42□□□□□ -0.42
TNPO3-205ENST00000627585 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
TNPO3-205ENST00000627585 NEFLP07196 543 aa12.41□□□□□ -0.42
TNPO3-205ENST00000627585 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
TNPO3-205ENST00000627585 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
TNPO3-205ENST00000627585 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
TNPO3-205ENST00000627585 KIF14Q15058 1648 aa12.4□□□□□ -0.42
TNPO3-205ENST00000627585 ATP10BO94823 1461 aa12.4□□□□□ -0.42
TNPO3-205ENST00000627585 DCAF11Q8TEB1 546 aa12.4□□□□□ -0.42
TNPO3-205ENST00000627585 HIRIP3Q9BW71 556 aaPredicted RBP12.39□□□□□ -0.43
TNPO3-205ENST00000627585 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
TNPO3-205ENST00000627585 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
TNPO3-205ENST00000627585 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
TNPO3-205ENST00000627585 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
TNPO3-205ENST00000627585 ANKRD50Q9ULJ7 1429 aa12.37□□□□□ -0.43
TNPO3-205ENST00000627585 CHD1O14646 1710 aa12.37□□□□□ -0.43
TNPO3-205ENST00000627585 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
TNPO3-205ENST00000627585 RAPGEF3O95398 923 aa12.36□□□□□ -0.43
TNPO3-205ENST00000627585 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
TNPO3-205ENST00000627585 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
TNPO3-205ENST00000627585 ASXL2Q76L83 1435 aa12.35□□□□□ -0.43
TNPO3-205ENST00000627585 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
TNPO3-205ENST00000627585 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
TNPO3-205ENST00000627585 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
TNPO3-205ENST00000627585 DAPK1P53355 1430 aa12.33□□□□□ -0.44
TNPO3-205ENST00000627585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNPO3-205ENST00000627585 ABCC2Q92887 1545 aa12.32□□□□□ -0.44
TNPO3-205ENST00000627585 CAMSAP2Q08AD1 1489 aa12.31□□□□□ -0.44
TNPO3-205ENST00000627585 WDR7Q9Y4E6 1490 aa12.3□□□□□ -0.44
TNPO3-205ENST00000627585 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
TNPO3-205ENST00000627585 ADGRL1O94910 1474 aa12.3□□□□□ -0.44
TNPO3-205ENST00000627585 CCDC144AA2RUR9 1427 aa12.3□□□□□ -0.44
TNPO3-205ENST00000627585 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
TNPO3-205ENST00000627585 C14orf37Q86TY3 774 aa12.29□□□□□ -0.44
TNPO3-205ENST00000627585 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
TNPO3-205ENST00000627585 FANCAO15360 1455 aa12.29□□□□□ -0.44
TNPO3-205ENST00000627585 L3MBTL2Q969R5 705 aa12.28□□□□□ -0.44
TNPO3-205ENST00000627585 POGKQ9P215 609 aa12.27□□□□□ -0.44
TNPO3-205ENST00000627585 HFM1A2PYH4 1435 aa12.27□□□□□ -0.44
TNPO3-205ENST00000627585 ABCC5O15440 1437 aa12.25□□□□□ -0.45
TNPO3-205ENST00000627585 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
TNPO3-205ENST00000627585 PLCH2O75038 1416 aa12.25□□□□□ -0.45
TNPO3-205ENST00000627585 TMC1Q8TDI8 760 aa12.25□□□□□ -0.45
TNPO3-205ENST00000627585 SCAF1Q9H7N4 1312 aaKnown RBP12.24□□□□□ -0.45
TNPO3-205ENST00000627585 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
TNPO3-205ENST00000627585 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
TNPO3-205ENST00000627585 AKNAQ7Z591 1439 aa12.23□□□□□ -0.45
TNPO3-205ENST00000627585 NUTM2DQ5VT03 806 aaPredicted RBP12.23□□□□□ -0.45
TNPO3-205ENST00000627585 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
TNPO3-205ENST00000627585 NAIPQ13075 1403 aa12.22□□□□□ -0.45
TNPO3-205ENST00000627585 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
TNPO3-205ENST00000627585 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
TNPO3-205ENST00000627585 STK26Q9P289 416 aa12.21□□□□□ -0.45
TNPO3-205ENST00000627585 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.46
TNPO3-205ENST00000627585 SLC24A1O60721 1099 aa12.19□□□□□ -0.46
TNPO3-205ENST00000627585 TEX14Q8IWB6 1497 aa12.19□□□□□ -0.46
TNPO3-205ENST00000627585 NCOA1Q15788 1441 aa12.19□□□□□ -0.46
TNPO3-205ENST00000627585 NEFMP07197 916 aa12.19□□□□□ -0.46
TNPO3-205ENST00000627585 SAFB2Q14151 953 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNPO3-205ENST00000627585 ABCA8O94911 1581 aa12.19□□□□□ -0.46
TNPO3-205ENST00000627585 TMF1P82094 1093 aa12.18□□□□□ -0.46
TNPO3-205ENST00000627585 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
TNPO3-205ENST00000627585 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
TNPO3-205ENST00000627585 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
TNPO3-205ENST00000627585 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
TNPO3-205ENST00000627585 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
TNPO3-205ENST00000627585 SYCP2Q9BX26 1530 aa12.16□□□□□ -0.46
TNPO3-205ENST00000627585 POGZQ7Z3K3 1410 aa12.15□□□□□ -0.46
TNPO3-205ENST00000627585 KIAA1107Q9UPP5 1409 aa12.15□□□□□ -0.46
TNPO3-205ENST00000627585 KNSTRNQ9Y448 316 aa12.14□□□□□ -0.47
TNPO3-205ENST00000627585 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
TNPO3-205ENST00000627585 SRPK2P78362 688 aaKnown RBP12.14□□□□□ -0.47
TNPO3-205ENST00000627585 MIER1Q8N108 512 aa12.14□□□□□ -0.47
TNPO3-205ENST00000627585 ZNF518AQ6AHZ1 1483 aa12.13□□□□□ -0.47
TNPO3-205ENST00000627585 TRAPPC8Q9Y2L5 1435 aa12.12□□□□□ -0.47
TNPO3-205ENST00000627585 MAGI3Q5TCQ9 1506 aa12.12□□□□□ -0.47
TNPO3-205ENST00000627585 CLASP1Q7Z460 1538 aa12.12□□□□□ -0.47
TNPO3-205ENST00000627585 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
TNPO3-205ENST00000627585 FAM9BQ8IZU0 186 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms