RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZMYM4Q5VZL5 1548 aa35.78■■■■□ 3.32
SF1-220ENST00000626028 ARHGAP5Q13017 1502 aa35.76■■■■□ 3.31
SF1-220ENST00000626028 CDC42BPAQ5VT25 1732 aa35.74■■■■□ 3.31
SF1-220ENST00000626028 MAGI2Q86UL8 1455 aa35.72■■■■□ 3.31
SF1-220ENST00000626028 SCAPERQ9BY12 1400 aa35.71■■■■□ 3.31
SF1-220ENST00000626028 ARHGEF40Q8TER5 1519 aa35.7■■■■□ 3.31
SF1-220ENST00000626028 POGZQ7Z3K3 1410 aa35.69■■■■□ 3.3
SF1-220ENST00000626028 MTUS2Q5JR59 1369 aa35.65■■■■□ 3.3
SF1-220ENST00000626028 VPS8Q8N3P4 1428 aa35.64■■■■□ 3.3
SF1-220ENST00000626028 EHBP1L1Q8N3D4 1523 aa35.63■■■■□ 3.29
SF1-220ENST00000626028 ZNF518AQ6AHZ1 1483 aa35.62■■■■□ 3.29
SF1-220ENST00000626028 ZFYVE16Q7Z3T8 1539 aa35.61■■■■□ 3.29
SF1-220ENST00000626028 KDM5CP41229 1560 aa35.58■■■■□ 3.29
SF1-220ENST00000626028 ABCC1P33527 1531 aa35.57■■■■□ 3.29
SF1-220ENST00000626028 GPATCH8Q9UKJ3 1502 aaKnown RBP35.57■■■■□ 3.28
SF1-220ENST00000626028 ITSN2Q9NZM3 1697 aa35.56■■■■□ 3.28
SF1-220ENST00000626028 TIAM1Q13009 1591 aa35.53■■■■□ 3.28
SF1-220ENST00000626028 BCORL1Q5H9F3 1711 aa35.52■■■■□ 3.28
SF1-220ENST00000626028 ADAMTSL3P82987 1691 aa35.52■■■■□ 3.28
SF1-220ENST00000626028 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.27
SF1-220ENST00000626028 MAP3K1Q13233 1512 aa35.5■■■■□ 3.27
SF1-220ENST00000626028 SUPT6HQ7KZ85 1726 aaKnown RBP35.49■■■■□ 3.27
SF1-220ENST00000626028 HECW2Q9P2P5 1572 aa35.48■■■■□ 3.27
SF1-220ENST00000626028 YEATS2Q9ULM3 1422 aa35.48■■■■□ 3.27
SF1-220ENST00000626028 SAMD9LQ8IVG5 1584 aa35.47■■■■□ 3.27
SF1-220ENST00000626028 PLEKHH2Q8IVE3 1493 aa35.45■■■■□ 3.27
SF1-220ENST00000626028 MLH3Q9UHC1 1453 aa35.44■■■■□ 3.26
SF1-220ENST00000626028 ATP10AO60312 1499 aa35.43■■■■□ 3.26
SF1-220ENST00000626028 ARHGEF12Q9NZN5 1544 aa35.42■■■■□ 3.26
SF1-220ENST00000626028 KIAA1107Q9UPP5 1409 aa35.41■■■■□ 3.26
SF1-220ENST00000626028 AFAP1Q8N556 730 aa35.41■■■■□ 3.26
SF1-220ENST00000626028 CFDP1Q9UEE9 299 aaPredicted RBP35.41■■■■□ 3.26
SF1-220ENST00000626028 ARID4BQ4LE39 1312 aaPredicted RBP35.4■■■■□ 3.26
SF1-220ENST00000626028 C9orf84Q5VXU9 1444 aa35.39■■■■□ 3.26
SF1-220ENST00000626028 TRAPPC8Q9Y2L5 1435 aa35.38■■■■□ 3.25
SF1-220ENST00000626028 SIGLEC1Q9BZZ2 1709 aa35.37■■■■□ 3.25
SF1-220ENST00000626028 REREQ9P2R6 1566 aa35.37■■■■□ 3.25
SF1-220ENST00000626028 LRRC9Q6ZRR7 1453 aa35.36■■■■□ 3.25
SF1-220ENST00000626028 SYCP2Q9BX26 1530 aa35.36■■■■□ 3.25
SF1-220ENST00000626028 NCOA2Q15596 1464 aa35.35■■■■□ 3.25
SF1-220ENST00000626028 DIP2CQ9Y2E4 1556 aa35.34■■■■□ 3.25
SF1-220ENST00000626028 ZNF777Q9ULD5 760 aaPredicted RBP35.33■■■■□ 3.25
SF1-220ENST00000626028 KIDINS220Q9ULH0 1771 aa35.33■■■■□ 3.25
SF1-220ENST00000626028 MADDQ8WXG6 1647 aa35.32■■■■□ 3.24
SF1-220ENST00000626028 ABCA6Q8N139 1617 aa35.3■■■■□ 3.24
SF1-220ENST00000626028 PTPRMP28827 1452 aa35.28■■■■□ 3.24
SF1-220ENST00000626028 MYT1LQ9UL68 1186 aa35.25■■■■□ 3.23
SF1-220ENST00000626028 FER1L4A9Z1Z3 1794 aa35.24■■■■□ 3.23
SF1-220ENST00000626028 RIMS1Q86UR5 1692 aaKnown RBP35.24■■■■□ 3.23
SF1-220ENST00000626028 HNRNPMP52272 730 aaKnown RBP eCLIP35.22■■■■□ 3.23
SF1-220ENST00000626028 AGLP35573 1532 aa35.22■■■■□ 3.23
SF1-220ENST00000626028 INO80Q9ULG1 1556 aaPredicted RBP35.21■■■■□ 3.23
SF1-220ENST00000626028 SPAG9O60271 1321 aaKnown RBP35.19■■■■□ 3.22
SF1-220ENST00000626028 ATP7AQ04656 1500 aa35.19■■■■□ 3.22
SF1-220ENST00000626028 APLP2Q06481 763 aa35.18■■■■□ 3.22
SF1-220ENST00000626028 MBD5Q9P267 1494 aa35.17■■■■□ 3.22
SF1-220ENST00000626028 RSPH4AQ5TD94 716 aa35.14■■■■□ 3.22
SF1-220ENST00000626028 CAMSAP2Q08AD1 1489 aa35.14■■■■□ 3.22
SF1-220ENST00000626028 KANK4Q5T7N3 995 aaPredicted RBP35.13■■■■□ 3.21
SF1-220ENST00000626028 ZNF644Q9H582 1327 aaPredicted RBP35.12■■■■□ 3.21
SF1-220ENST00000626028 ADGBQ8N7X0 1667 aa35.11■■■■□ 3.21
SF1-220ENST00000626028 RTEL1-TNFRSF6BF6WH68 1400 aa35.1■■■■□ 3.21
SF1-220ENST00000626028 ARHGEF5Q12774 1597 aa35.08■■■■□ 3.21
SF1-220ENST00000626028 MIA2Q96PC5 1412 aa35.08■■■■□ 3.21
SF1-220ENST00000626028 CCDC141Q6ZP82 1450 aa35.07■■■■□ 3.2
SF1-220ENST00000626028 MYOM3Q5VTT5 1437 aa35.06■■■■□ 3.2
SF1-220ENST00000626028 PLXNC1O60486 1568 aa35.05■■■■□ 3.2
SF1-220ENST00000626028 MLECQ14165 292 aa35.05■■■■□ 3.2
SF1-220ENST00000626028 A2MP01023 1474 aa35.01■■■■□ 3.19
SF1-220ENST00000626028 SETD1BQ9UPS6 1966 aaKnown RBP34.96■■■■□ 3.19
SF1-220ENST00000626028 CNTLNQ9NXG0 1405 aa34.93■■■■□ 3.18
SF1-220ENST00000626028 MAST1Q9Y2H9 1570 aa34.91■■■■□ 3.18
SF1-220ENST00000626028 MROH2AA6NES4 1674 aa34.91■■■■□ 3.18
SF1-220ENST00000626028 TSPY4P0CV99 314 aa34.89■■■■□ 3.18
SF1-220ENST00000626028 TSPY10P0CW01 314 aa34.89■■■■□ 3.18
SF1-220ENST00000626028 ESF1Q9H501 851 aaKnown RBP34.88■■■■□ 3.17
SF1-220ENST00000626028 C3P01024 1663 aa34.88■■■■□ 3.17
SF1-220ENST00000626028 PTPN23Q9H3S7 1636 aa34.86■■■■□ 3.17
SF1-220ENST00000626028 DHX29Q7Z478 1369 aaKnown RBP34.86■■■■□ 3.17
SF1-220ENST00000626028 LMTK3Q96Q04 1460 aa34.85■■■■□ 3.17
SF1-220ENST00000626028 PREX1Q8TCU6 1659 aa34.85■■■■□ 3.17
SF1-220ENST00000626028 PPP6R1Q9UPN7 881 aa34.84■■■■□ 3.17
SF1-220ENST00000626028 FGD6Q6ZV73 1430 aa34.81■■■■□ 3.16
SF1-220ENST00000626028 CROCC2H7BZ55 1655 aa34.79■■■■□ 3.16
SF1-220ENST00000626028 TCOF1Q13428 1488 aaKnown RBP34.79■■■■□ 3.16
SF1-220ENST00000626028 FAM135AQ9P2D6 1515 aa34.76■■■■□ 3.16
SF1-220ENST00000626028 CLTCQ00610 1675 aaKnown RBP34.76■■■■□ 3.15
SF1-220ENST00000626028 SHANK2Q9UPX8 1470 aa34.75■■■■□ 3.15
SF1-220ENST00000626028 DNMT1P26358 1616 aaKnown RBP34.73■■■■□ 3.15
SF1-220ENST00000626028 PLPPR3Q6T4P5 718 aa34.73■■■■□ 3.15
SF1-220ENST00000626028 CEBPAP49715 358 aaPredicted RBP34.72■■■■□ 3.15
SF1-220ENST00000626028 EIF2AK4Q9P2K8 1649 aaKnown RBP34.7■■■■□ 3.15
SF1-220ENST00000626028 GGT6Q6P531 493 aa34.69■■■■□ 3.14
SF1-220ENST00000626028 NPATQ14207 1427 aa34.68■■■■□ 3.14
SF1-220ENST00000626028 ZMYM3Q14202 1370 aa34.67■■■■□ 3.14
SF1-220ENST00000626028 ABCC5O15440 1437 aa34.66■■■■□ 3.14
SF1-220ENST00000626028 RNF17Q9BXT8 1623 aaKnown RBP34.65■■■■□ 3.14
SF1-220ENST00000626028 DAPK1P53355 1430 aa34.64■■■■□ 3.14
SF1-220ENST00000626028 KIF3BO15066 747 aa34.64■■■■□ 3.14
SF1-220ENST00000626028 DUOX2Q9NRD8 1548 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms