RNA–Protein interactions for RNA: ENST00000625943.1

SNORD38B-202, Transcript of small nucleolar RNA, C/D box 38B, humanhuman

BASIC

Gene SNORD38B, Length 69 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD38B-202ENST00000625943 HOXB1P14653 301 aaPredicted RBP3.59□□□□□ -1.83
SNORD38B-202ENST00000625943 MARVELD3Q96A59 401 aa3.59□□□□□ -1.83
SNORD38B-202ENST00000625943 CHGAP10645 457 aaKnown RBP3.58□□□□□ -1.84
SNORD38B-202ENST00000625943 GPR153Q6NV75 609 aa3.58□□□□□ -1.84
SNORD38B-202ENST00000625943 C2orf72A6NCS6 295 aa3.57□□□□□ -1.84
SNORD38B-202ENST00000625943 DOK7Q18PE1 504 aa3.57□□□□□ -1.84
SNORD38B-202ENST00000625943 ZSWIM6Q9HCJ5 1215 aa3.56□□□□□ -1.84
SNORD38B-202ENST00000625943 GTPBP6O43824 516 aaPredicted RBP3.55□□□□□ -1.84
SNORD38B-202ENST00000625943 SLC34A2O95436 690 aa3.55□□□□□ -1.84
SNORD38B-202ENST00000625943 EMP3P54852 163 aa3.55□□□□□ -1.84
SNORD38B-202ENST00000625943 HS3ST6Q96QI5 342 aa3.55□□□□□ -1.84
SNORD38B-202ENST00000625943 PLSCR2Q9NRY7 297 aa3.55□□□□□ -1.84
SNORD38B-202ENST00000625943 FAM205CA6NFA0 338 aa3.54□□□□□ -1.84
SNORD38B-202ENST00000625943 ZNF710Q8N1W2 664 aa3.54□□□□□ -1.84
SNORD38B-202ENST00000625943 KRTAP3-3Q9BYR6 98 aa3.54□□□□□ -1.84
SNORD38B-202ENST00000625943 KRTAP3-2Q9BYR7 98 aa3.54□□□□□ -1.84
SNORD38B-202ENST00000625943 KDM4FA0A1W2PPD8 638 aa3.53□□□□□ -1.84
SNORD38B-202ENST00000625943 RIMBP2O15034 1052 aa3.53□□□□□ -1.84
SNORD38B-202ENST00000625943 FOXK1P85037 733 aa3.53□□□□□ -1.84
SNORD38B-202ENST00000625943 ARSIQ5FYB1 569 aa3.53□□□□□ -1.84
SNORD38B-202ENST00000625943 GPHNQ9NQX3 736 aaPredicted RBP3.53□□□□□ -1.84
SNORD38B-202ENST00000625943 SPNS2Q8IVW8 549 aa3.52□□□□□ -1.85
SNORD38B-202ENST00000625943 TMC2Q8TDI7 906 aa3.52□□□□□ -1.85
SNORD38B-202ENST00000625943 KHSRPQ92945 711 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNORD38B-202ENST00000625943 ERBB3P21860 1342 aa3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 DSG2Q14126 1118 aa3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 ZNF687Q8N1G0 1237 aa3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 PTCD2Q8WV60 388 aaKnown RBP3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 CRISPLD2Q9H0B8 497 aa3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 RYDENQ9NUL5 291 aaKnown RBP3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 PCDHGA4Q9Y5G9 962 aa3.51□□□□□ -1.85
SNORD38B-202ENST00000625943 NCKAP5LQ9HCH0 1330 aa3.5□□□□□ -1.85
SNORD38B-202ENST00000625943 ZNF316A6NFI3 1004 aaPredicted RBP3.5□□□□□ -1.85
SNORD38B-202ENST00000625943 VARS2Q5ST30 1063 aaKnown RBP3.5□□□□□ -1.85
SNORD38B-202ENST00000625943 PLPP6Q8IY26 295 aa3.5□□□□□ -1.85
SNORD38B-202ENST00000625943 RTN4Q9NQC3 1192 aaKnown RBP3.5□□□□□ -1.85
SNORD38B-202ENST00000625943 MMRN1Q13201 1228 aa3.49□□□□□ -1.85
SNORD38B-202ENST00000625943 AMER1Q5JTC6 1135 aaPredicted RBP3.49□□□□□ -1.85
SNORD38B-202ENST00000625943 POTEEQ6S8J3 1075 aa3.49□□□□□ -1.85
SNORD38B-202ENST00000625943 NUDT7P0C024 238 aa3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 PDE4AP27815 886 aa3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 CADPS2Q86UW7 1296 aa3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 OXER1Q8TDS5 423 aa3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 BBXQ8WY36 941 aaPredicted RBP3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 LHX6Q9UPM6 363 aa3.48□□□□□ -1.85
SNORD38B-202ENST00000625943 MFSD10Q14728 455 aa3.47□□□□□ -1.85
SNORD38B-202ENST00000625943 DCAF8L2P0C7V8 631 aa3.46□□□□□ -1.86
SNORD38B-202ENST00000625943 PPP1R15BQ5SWA1 713 aa3.46□□□□□ -1.86
SNORD38B-202ENST00000625943 ANO8Q9HCE9 1232 aaPredicted RBP3.46□□□□□ -1.86
SNORD38B-202ENST00000625943 TBC1D12O60347 775 aa3.45□□□□□ -1.86
SNORD38B-202ENST00000625943 LARP6Q9BRS8 491 aaKnown RBP3.45□□□□□ -1.86
SNORD38B-202ENST00000625943 DDX27Q96GQ7 796 aaKnown RBP3.44□□□□□ -1.86
SNORD38B-202ENST00000625943 EMILIN3Q9NT22 766 aa3.44□□□□□ -1.86
SNORD38B-202ENST00000625943 PSDA5PKW4 1024 aaPredicted RBP3.43□□□□□ -1.86
SNORD38B-202ENST00000625943 PBX2P40425 430 aa3.43□□□□□ -1.86
SNORD38B-202ENST00000625943 CAMK2BQ13554 666 aa3.43□□□□□ -1.86
SNORD38B-202ENST00000625943 ARHGAP33O14559 1287 aa3.42□□□□□ -1.86
SNORD38B-202ENST00000625943 LSM11P83369 360 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNORD38B-202ENST00000625943 SPRYD3Q8NCJ5 442 aa3.42□□□□□ -1.86
SNORD38B-202ENST00000625943 UPF1Q92900 1129 aaKnown RBP eCLIP3.42□□□□□ -1.86
SNORD38B-202ENST00000625943 AXIN2Q9Y2T1 843 aa3.42□□□□□ -1.86
SNORD38B-202ENST00000625943 EVI5O60447 810 aa3.41□□□□□ -1.86
SNORD38B-202ENST00000625943 FOSBP53539 338 aa3.41□□□□□ -1.86
SNORD38B-202ENST00000625943 DMRTA1Q5VZB9 504 aa3.41□□□□□ -1.86
SNORD38B-202ENST00000625943 ANKRD13DQ6ZTN6 518 aa3.41□□□□□ -1.86
SNORD38B-202ENST00000625943 TK2O00142 265 aa3.4□□□□□ -1.87
SNORD38B-202ENST00000625943 HRO43593 1189 aa3.4□□□□□ -1.87
SNORD38B-202ENST00000625943 PSEN2P49810 448 aa3.4□□□□□ -1.87
SNORD38B-202ENST00000625943 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.4□□□□□ -1.87
SNORD38B-202ENST00000625943 MYT1LQ9UL68 1186 aa3.4□□□□□ -1.87
SNORD38B-202ENST00000625943 PTGER2P43116 358 aa3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 MAP3K9P80192 1104 aa3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 PPP4R3BQ5MIZ7 849 aa3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 ADGRD1Q6QNK2 874 aa3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 PAXIP1Q6ZW49 1069 aaPredicted RBP3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 BCL2L12Q9HB09 334 aa3.39□□□□□ -1.87
SNORD38B-202ENST00000625943 ZNF454Q8N9F8 522 aa3.38□□□□□ -1.87
SNORD38B-202ENST00000625943 RNF166Q96A37 237 aaPredicted RBP3.38□□□□□ -1.87
SNORD38B-202ENST00000625943 JPH4Q96JJ6 628 aa3.38□□□□□ -1.87
SNORD38B-202ENST00000625943 SLC4A5Q9BY07 1137 aa3.38□□□□□ -1.87
SNORD38B-202ENST00000625943 PCDHGA10Q9Y5H3 936 aa3.38□□□□□ -1.87
SNORD38B-202ENST00000625943 BHMG1C9JSJ3 638 aaPredicted RBP3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 ZDHHC16Q969W1 377 aa3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 CFAP44Q96MT7 982 aa3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 ADAM33Q9BZ11 813 aa3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 VPS9D1Q9Y2B5 631 aa3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 ARIH1Q9Y4X5 557 aaPredicted RBP3.37□□□□□ -1.87
SNORD38B-202ENST00000625943 DPYSL4O14531 572 aa3.36□□□□□ -1.87
SNORD38B-202ENST00000625943 PHF14O94880 888 aa3.36□□□□□ -1.87
SNORD38B-202ENST00000625943 ZBED2Q9BTP6 218 aa3.36□□□□□ -1.87
SNORD38B-202ENST00000625943 PTPREP23469 700 aa3.35□□□□□ -1.87
SNORD38B-202ENST00000625943 E2F4Q16254 413 aa3.35□□□□□ -1.87
SNORD38B-202ENST00000625943 KCNK17Q96T54 332 aa3.35□□□□□ -1.87
SNORD38B-202ENST00000625943 COL9A1P20849 921 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 PDIA6Q15084 440 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 TYW1BQ6NUM6 668 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 FBXW7Q969H0 707 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 EPAS1Q99814 870 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 TSHZ2Q9NRE2 1034 aa3.34□□□□□ -1.87
SNORD38B-202ENST00000625943 SPDYE16A6NNV3 312 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms