RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 ADGRL1O94910 1474 aa14.58□□□□□ -0.08
NELFE-214ENST00000625905 MAP3K1Q13233 1512 aa14.58□□□□□ -0.08
NELFE-214ENST00000625905 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.08
NELFE-214ENST00000625905 ITSN2Q9NZM3 1697 aa14.57□□□□□ -0.08
NELFE-214ENST00000625905 RICTORQ6R327 1708 aa14.57□□□□□ -0.08
NELFE-214ENST00000625905 DENND4BO75064 1496 aaPredicted RBP14.57□□□□□ -0.08
NELFE-214ENST00000625905 LRRC9Q6ZRR7 1453 aa14.56□□□□□ -0.08
NELFE-214ENST00000625905 EFCAB2Q5VUJ9 269 aa14.55□□□□□ -0.08
NELFE-214ENST00000625905 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
NELFE-214ENST00000625905 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
NELFE-214ENST00000625905 ABCC1P33527 1531 aa14.54□□□□□ -0.08
NELFE-214ENST00000625905 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
NELFE-214ENST00000625905 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
NELFE-214ENST00000625905 NCOA2Q15596 1464 aa14.53□□□□□ -0.08
NELFE-214ENST00000625905 ARHGEF40Q8TER5 1519 aa14.52□□□□□ -0.08
NELFE-214ENST00000625905 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.08
NELFE-214ENST00000625905 RAPGEF3O95398 923 aa14.52□□□□□ -0.09
NELFE-214ENST00000625905 SAMD9LQ8IVG5 1584 aa14.51□□□□□ -0.09
NELFE-214ENST00000625905 APLP2Q06481 763 aa14.51□□□□□ -0.09
NELFE-214ENST00000625905 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
NELFE-214ENST00000625905 ZFYVE16Q7Z3T8 1539 aa14.49□□□□□ -0.09
NELFE-214ENST00000625905 SYCP2Q9BX26 1530 aa14.49□□□□□ -0.09
NELFE-214ENST00000625905 KDM5CP41229 1560 aa14.48□□□□□ -0.09
NELFE-214ENST00000625905 PLEKHH2Q8IVE3 1493 aa14.48□□□□□ -0.09
NELFE-214ENST00000625905 CFDP1Q9UEE9 299 aaPredicted RBP14.47□□□□□ -0.09
NELFE-214ENST00000625905 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
NELFE-214ENST00000625905 MAGI2Q86UL8 1455 aa14.46□□□□□ -0.09
NELFE-214ENST00000625905 KANK4Q5T7N3 995 aaPredicted RBP14.46□□□□□ -0.09
NELFE-214ENST00000625905 ZNF777Q9ULD5 760 aaPredicted RBP14.46□□□□□ -0.09
NELFE-214ENST00000625905 ARHGEF12Q9NZN5 1544 aa14.46□□□□□ -0.1
NELFE-214ENST00000625905 KIAA1107Q9UPP5 1409 aa14.43□□□□□ -0.1
NELFE-214ENST00000625905 TRAPPC8Q9Y2L5 1435 aa14.43□□□□□ -0.1
NELFE-214ENST00000625905 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
NELFE-214ENST00000625905 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
NELFE-214ENST00000625905 MYOM3Q5VTT5 1437 aa14.41□□□□□ -0.1
NELFE-214ENST00000625905 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
NELFE-214ENST00000625905 DIP2CQ9Y2E4 1556 aa14.39□□□□□ -0.11
NELFE-214ENST00000625905 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
NELFE-214ENST00000625905 AFAP1Q8N556 730 aa14.39□□□□□ -0.11
NELFE-214ENST00000625905 C9orf84Q5VXU9 1444 aa14.39□□□□□ -0.11
NELFE-214ENST00000625905 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
NELFE-214ENST00000625905 MYT1LQ9UL68 1186 aa14.38□□□□□ -0.11
NELFE-214ENST00000625905 MIA2Q96PC5 1412 aa14.38□□□□□ -0.11
NELFE-214ENST00000625905 ZNF644Q9H582 1327 aaPredicted RBP14.38□□□□□ -0.11
NELFE-214ENST00000625905 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
NELFE-214ENST00000625905 ATP7AQ04656 1500 aa14.37□□□□□ -0.11
NELFE-214ENST00000625905 CCDC141Q6ZP82 1450 aa14.37□□□□□ -0.11
NELFE-214ENST00000625905 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
NELFE-214ENST00000625905 SIGLEC1Q9BZZ2 1709 aa14.36□□□□□ -0.11
NELFE-214ENST00000625905 ARHGEF5Q12774 1597 aa14.36□□□□□ -0.11
NELFE-214ENST00000625905 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
NELFE-214ENST00000625905 ATP10AO60312 1499 aa14.36□□□□□ -0.11
NELFE-214ENST00000625905 REREQ9P2R6 1566 aa14.35□□□□□ -0.11
NELFE-214ENST00000625905 SPAG9O60271 1321 aaKnown RBP14.35□□□□□ -0.11
NELFE-214ENST00000625905 BCORL1Q5H9F3 1711 aa14.35□□□□□ -0.11
NELFE-214ENST00000625905 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
NELFE-214ENST00000625905 ARID4BQ4LE39 1312 aaPredicted RBP14.34□□□□□ -0.11
NELFE-214ENST00000625905 FGD6Q6ZV73 1430 aa14.33□□□□□ -0.11
NELFE-214ENST00000625905 KDM4FA0A1W2PPD8 638 aa14.33□□□□□ -0.12
NELFE-214ENST00000625905 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
NELFE-214ENST00000625905 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
NELFE-214ENST00000625905 ADGBQ8N7X0 1667 aa14.3□□□□□ -0.12
NELFE-214ENST00000625905 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
NELFE-214ENST00000625905 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
NELFE-214ENST00000625905 RTEL1-TNFRSF6BF6WH68 1400 aa14.29□□□□□ -0.12
NELFE-214ENST00000625905 AGLP35573 1532 aa14.29□□□□□ -0.12
NELFE-214ENST00000625905 PLXNC1O60486 1568 aa14.29□□□□□ -0.12
NELFE-214ENST00000625905 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
NELFE-214ENST00000625905 MAST1Q9Y2H9 1570 aa14.28□□□□□ -0.12
NELFE-214ENST00000625905 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.12
NELFE-214ENST00000625905 DNMT1P26358 1616 aaKnown RBP14.27□□□□□ -0.12
NELFE-214ENST00000625905 A2MP01023 1474 aa14.27□□□□□ -0.12
NELFE-214ENST00000625905 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
NELFE-214ENST00000625905 SHANK2Q9UPX8 1470 aa14.26□□□□□ -0.13
NELFE-214ENST00000625905 MLECQ14165 292 aa14.24□□□□□ -0.13
NELFE-214ENST00000625905 DAPK1P53355 1430 aa14.24□□□□□ -0.13
NELFE-214ENST00000625905 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
NELFE-214ENST00000625905 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
NELFE-214ENST00000625905 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
NELFE-214ENST00000625905 PTPRMP28827 1452 aa14.23□□□□□ -0.13
NELFE-214ENST00000625905 ABCC5O15440 1437 aa14.23□□□□□ -0.13
NELFE-214ENST00000625905 FAM50AQ14320 339 aaKnown RBP14.2□□□□□ -0.14
NELFE-214ENST00000625905 DHX29Q7Z478 1369 aaKnown RBP14.18□□□□□ -0.14
NELFE-214ENST00000625905 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
NELFE-214ENST00000625905 DUOX2Q9NRD8 1548 aa14.17□□□□□ -0.14
NELFE-214ENST00000625905 KIF15Q9NS87 1388 aa14.16□□□□□ -0.14
NELFE-214ENST00000625905 CNTLNQ9NXG0 1405 aa14.15□□□□□ -0.14
NELFE-214ENST00000625905 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
NELFE-214ENST00000625905 RNF17Q9BXT8 1623 aaKnown RBP14.15□□□□□ -0.14
NELFE-214ENST00000625905 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
NELFE-214ENST00000625905 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
NELFE-214ENST00000625905 ANKRD30AQ9BXX3 1397 aa14.14□□□□□ -0.15
NELFE-214ENST00000625905 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
NELFE-214ENST00000625905 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
NELFE-214ENST00000625905 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
NELFE-214ENST00000625905 CLTCQ00610 1675 aaKnown RBP14.14□□□□□ -0.15
NELFE-214ENST00000625905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.152e-7■■■■□ 20.6
NELFE-214ENST00000625905 C3P01024 1663 aa14.13□□□□□ -0.15
NELFE-214ENST00000625905 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
NELFE-214ENST00000625905 KIF3BO15066 747 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms