RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
LINC01560-202ENST00000624822 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
LINC01560-202ENST00000624822 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
LINC01560-202ENST00000624822 PLEKHD1A6NEE1 506 aa15.23■□□□□ 0.03
LINC01560-202ENST00000624822 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
LINC01560-202ENST00000624822 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
LINC01560-202ENST00000624822 CDK11AQ9UQ88 783 aaPredicted RBP15.2■□□□□ 0.02
LINC01560-202ENST00000624822 KIF14Q15058 1648 aa15.18■□□□□ 0.02
LINC01560-202ENST00000624822 CD109Q6YHK3 1445 aa15.17■□□□□ 0.02
LINC01560-202ENST00000624822 TEX14Q8IWB6 1497 aa15.17■□□□□ 0.02
LINC01560-202ENST00000624822 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
LINC01560-202ENST00000624822 TTC37Q6PGP7 1564 aa15.16■□□□□ 0.02
LINC01560-202ENST00000624822 KDM6BO15054 1643 aa15.16■□□□□ 0.02
LINC01560-202ENST00000624822 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
LINC01560-202ENST00000624822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01560-202ENST00000624822 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
LINC01560-202ENST00000624822 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
LINC01560-202ENST00000624822 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
LINC01560-202ENST00000624822 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
LINC01560-202ENST00000624822 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
LINC01560-202ENST00000624822 CFAP74Q9C0B2 1584 aa15.1■□□□□ 0.01
LINC01560-202ENST00000624822 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
LINC01560-202ENST00000624822 EHBP1L1Q8N3D4 1523 aa15.08■□□□□ 0.01
LINC01560-202ENST00000624822 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
LINC01560-202ENST00000624822 CDC42BPBQ9Y5S2 1711 aa15.06■□□□□ 0
LINC01560-202ENST00000624822 PREX2Q70Z35 1606 aa15.06■□□□□ 0
LINC01560-202ENST00000624822 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
LINC01560-202ENST00000624822 ARHGAP5Q13017 1502 aa15.04■□□□□ -0
LINC01560-202ENST00000624822 FANCAO15360 1455 aa15.04■□□□□ -0
LINC01560-202ENST00000624822 NEO1Q92859 1461 aa15.03■□□□□ -0
LINC01560-202ENST00000624822 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
LINC01560-202ENST00000624822 PLCH2O75038 1416 aa15.01□□□□□ -0.01
LINC01560-202ENST00000624822 ARAP3Q8WWN8 1544 aa15.01□□□□□ -0.01
LINC01560-202ENST00000624822 POTEHQ6S545 545 aa15□□□□□ -0.01
LINC01560-202ENST00000624822 MAP3K1Q13233 1512 aa15□□□□□ -0.01
LINC01560-202ENST00000624822 COL17A1Q9UMD9 1497 aaPredicted RBP15□□□□□ -0.01
LINC01560-202ENST00000624822 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
LINC01560-202ENST00000624822 AKNAQ7Z591 1439 aa14.99□□□□□ -0.01
LINC01560-202ENST00000624822 PHLDB1Q86UU1 1377 aa14.98□□□□□ -0.01
LINC01560-202ENST00000624822 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
LINC01560-202ENST00000624822 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
LINC01560-202ENST00000624822 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
LINC01560-202ENST00000624822 POLA2Q14181 598 aa14.97□□□□□ -0.01
LINC01560-202ENST00000624822 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
LINC01560-202ENST00000624822 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
LINC01560-202ENST00000624822 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
LINC01560-202ENST00000624822 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
LINC01560-202ENST00000624822 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
LINC01560-202ENST00000624822 GPATCH8Q9UKJ3 1502 aaKnown RBP14.94□□□□□ -0.02
LINC01560-202ENST00000624822 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
LINC01560-202ENST00000624822 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
LINC01560-202ENST00000624822 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
LINC01560-202ENST00000624822 SAMD9LQ8IVG5 1584 aa14.93□□□□□ -0.02
LINC01560-202ENST00000624822 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
LINC01560-202ENST00000624822 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
LINC01560-202ENST00000624822 ABCC1P33527 1531 aa14.92□□□□□ -0.02
LINC01560-202ENST00000624822 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
LINC01560-202ENST00000624822 SYCP2Q9BX26 1530 aa14.89□□□□□ -0.03
LINC01560-202ENST00000624822 POGZQ7Z3K3 1410 aa14.88□□□□□ -0.03
LINC01560-202ENST00000624822 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
LINC01560-202ENST00000624822 ZMYM4Q5VZL5 1548 aa14.87□□□□□ -0.03
LINC01560-202ENST00000624822 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
LINC01560-202ENST00000624822 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
LINC01560-202ENST00000624822 PLEKHH2Q8IVE3 1493 aa14.85□□□□□ -0.03
LINC01560-202ENST00000624822 ARHGEF40Q8TER5 1519 aa14.85□□□□□ -0.03
LINC01560-202ENST00000624822 ARHGEF12Q9NZN5 1544 aa14.85□□□□□ -0.03
LINC01560-202ENST00000624822 MYOM3Q5VTT5 1437 aa14.84□□□□□ -0.03
LINC01560-202ENST00000624822 CAMSAP2Q08AD1 1489 aa14.84□□□□□ -0.03
LINC01560-202ENST00000624822 ZFYVE16Q7Z3T8 1539 aa14.84□□□□□ -0.03
LINC01560-202ENST00000624822 KDM5CP41229 1560 aa14.84□□□□□ -0.03
LINC01560-202ENST00000624822 ZBTB22O15209 634 aa14.83□□□□□ -0.04
LINC01560-202ENST00000624822 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.04
LINC01560-202ENST00000624822 HNRNPMP52272 730 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC01560-202ENST00000624822 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
LINC01560-202ENST00000624822 ZNF644Q9H582 1327 aaPredicted RBP14.82□□□□□ -0.04
LINC01560-202ENST00000624822 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
LINC01560-202ENST00000624822 MAGI2Q86UL8 1455 aa14.81□□□□□ -0.04
LINC01560-202ENST00000624822 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
LINC01560-202ENST00000624822 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
LINC01560-202ENST00000624822 KIAA1107Q9UPP5 1409 aa14.8□□□□□ -0.04
LINC01560-202ENST00000624822 KIDINS220Q9ULH0 1771 aa14.8□□□□□ -0.04
LINC01560-202ENST00000624822 ABCA6Q8N139 1617 aa14.79□□□□□ -0.04
LINC01560-202ENST00000624822 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
LINC01560-202ENST00000624822 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.04
LINC01560-202ENST00000624822 ARHGEF5Q12774 1597 aa14.77□□□□□ -0.05
LINC01560-202ENST00000624822 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.05
LINC01560-202ENST00000624822 ATP7AQ04656 1500 aa14.76□□□□□ -0.05
LINC01560-202ENST00000624822 CCDC141Q6ZP82 1450 aa14.76□□□□□ -0.05
LINC01560-202ENST00000624822 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
LINC01560-202ENST00000624822 SIGLEC1Q9BZZ2 1709 aa14.76□□□□□ -0.05
LINC01560-202ENST00000624822 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
LINC01560-202ENST00000624822 MLH3Q9UHC1 1453 aa14.76□□□□□ -0.05
LINC01560-202ENST00000624822 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
LINC01560-202ENST00000624822 CROCC2H7BZ55 1655 aa14.75□□□□□ -0.05
LINC01560-202ENST00000624822 SPAG9O60271 1321 aaKnown RBP14.75□□□□□ -0.05
LINC01560-202ENST00000624822 MBD5Q9P267 1494 aa14.75□□□□□ -0.05
LINC01560-202ENST00000624822 ATP10AO60312 1499 aa14.74□□□□□ -0.05
LINC01560-202ENST00000624822 ADGBQ8N7X0 1667 aa14.74□□□□□ -0.05
LINC01560-202ENST00000624822 C9orf84Q5VXU9 1444 aa14.74□□□□□ -0.05
LINC01560-202ENST00000624822 BCORL1Q5H9F3 1711 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms