RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
CDKL5-207ENST00000624700 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
CDKL5-207ENST00000624700 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
CDKL5-207ENST00000624700 STK25O00506 426 aa10.81□□□□□ -0.68
CDKL5-207ENST00000624700 FBXO22Q8NEZ5 403 aa10.81□□□□□ -0.68
CDKL5-207ENST00000624700 MMRN1Q13201 1228 aa10.79□□□□□ -0.68
CDKL5-207ENST00000624700 RGL2O15211 777 aa10.77□□□□□ -0.69
CDKL5-207ENST00000624700 MFRPQ9BY79 579 aa10.77□□□□□ -0.69
CDKL5-207ENST00000624700 KRTAP3-3Q9BYR6 98 aa10.76□□□□□ -0.69
CDKL5-207ENST00000624700 KRTAP3-2Q9BYR7 98 aa10.76□□□□□ -0.69
CDKL5-207ENST00000624700 ZSWIM6Q9HCJ5 1215 aa10.76□□□□□ -0.69
CDKL5-207ENST00000624700 ERBB3P21860 1342 aa10.76□□□□□ -0.69
CDKL5-207ENST00000624700 DCAF8L2P0C7V8 631 aa10.73□□□□□ -0.69
CDKL5-207ENST00000624700 GPR153Q6NV75 609 aa10.7□□□□□ -0.7
CDKL5-207ENST00000624700 VARS2Q5ST30 1063 aaKnown RBP10.68□□□□□ -0.7
CDKL5-207ENST00000624700 KIF3CO14782 793 aa10.64□□□□□ -0.71
CDKL5-207ENST00000624700 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
CDKL5-207ENST00000624700 C2orf72A6NCS6 295 aa10.63□□□□□ -0.71
CDKL5-207ENST00000624700 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
CDKL5-207ENST00000624700 ZNF687Q8N1G0 1237 aa10.61□□□□□ -0.71
CDKL5-207ENST00000624700 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
CDKL5-207ENST00000624700 PPP1R37O75864 691 aa10.58□□□□□ -0.72
CDKL5-207ENST00000624700 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
CDKL5-207ENST00000624700 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-207ENST00000624700 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDKL5-207ENST00000624700 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-207ENST00000624700 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
CDKL5-207ENST00000624700 SLC34A2O95436 690 aa10.55□□□□□ -0.72
CDKL5-207ENST00000624700 NUDT7P0C024 238 aa10.51□□□□□ -0.73
CDKL5-207ENST00000624700 PCDHGA4Q9Y5G9 962 aa10.51□□□□□ -0.73
CDKL5-207ENST00000624700 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
CDKL5-207ENST00000624700 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
CDKL5-207ENST00000624700 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
CDKL5-207ENST00000624700 MYT1LQ9UL68 1186 aa10.48□□□□□ -0.73
CDKL5-207ENST00000624700 PTGER2P43116 358 aa10.46□□□□□ -0.73
CDKL5-207ENST00000624700 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
CDKL5-207ENST00000624700 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
CDKL5-207ENST00000624700 PBX2P40425 430 aa10.44□□□□□ -0.74
CDKL5-207ENST00000624700 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDKL5-207ENST00000624700 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
CDKL5-207ENST00000624700 FOXK1P85037 733 aa10.43□□□□□ -0.74
CDKL5-207ENST00000624700 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-207ENST00000624700 SPRYD3Q8NCJ5 442 aa10.42□□□□□ -0.74
CDKL5-207ENST00000624700 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
CDKL5-207ENST00000624700 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
CDKL5-207ENST00000624700 PLPP6Q8IY26 295 aa10.41□□□□□ -0.74
CDKL5-207ENST00000624700 RYDENQ9NUL5 291 aaKnown RBP10.41□□□□□ -0.74
CDKL5-207ENST00000624700 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-207ENST00000624700 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
CDKL5-207ENST00000624700 DSG2Q14126 1118 aa10.38□□□□□ -0.75
CDKL5-207ENST00000624700 POTEEQ6S8J3 1075 aa10.37□□□□□ -0.75
CDKL5-207ENST00000624700 PAXIP1Q6ZW49 1069 aaPredicted RBP10.37□□□□□ -0.75
CDKL5-207ENST00000624700 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
CDKL5-207ENST00000624700 TBC1D12O60347 775 aa10.36□□□□□ -0.75
CDKL5-207ENST00000624700 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
CDKL5-207ENST00000624700 ARHGAP33O14559 1287 aa10.33□□□□□ -0.76
CDKL5-207ENST00000624700 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
CDKL5-207ENST00000624700 CRISPLD2Q9H0B8 497 aa10.3□□□□□ -0.76
CDKL5-207ENST00000624700 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
CDKL5-207ENST00000624700 VSIG10Q8N0Z9 540 aa10.28□□□□□ -0.76
CDKL5-207ENST00000624700 OXER1Q8TDS5 423 aa10.28□□□□□ -0.76
CDKL5-207ENST00000624700 ADGRD1Q6QNK2 874 aa10.27□□□□□ -0.77
CDKL5-207ENST00000624700 GTPBP6O43824 516 aaPredicted RBP10.26□□□□□ -0.77
CDKL5-207ENST00000624700 PPP1R15BQ5SWA1 713 aa10.26□□□□□ -0.77
CDKL5-207ENST00000624700 TK2O00142 265 aa10.25□□□□□ -0.77
CDKL5-207ENST00000624700 PDE4AP27815 886 aa10.25□□□□□ -0.77
CDKL5-207ENST00000624700 PSEN2P49810 448 aa10.24□□□□□ -0.77
CDKL5-207ENST00000624700 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDKL5-207ENST00000624700 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
CDKL5-207ENST00000624700 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
CDKL5-207ENST00000624700 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
CDKL5-207ENST00000624700 HCSTQ9UBK5 93 aa10.2□□□□□ -0.78
CDKL5-207ENST00000624700 HRO43593 1189 aa10.19□□□□□ -0.78
CDKL5-207ENST00000624700 KCNK17Q96T54 332 aa10.19□□□□□ -0.78
CDKL5-207ENST00000624700 ZNF454Q8N9F8 522 aa10.18□□□□□ -0.78
CDKL5-207ENST00000624700 LARP6Q9BRS8 491 aaKnown RBP10.18□□□□□ -0.78
CDKL5-207ENST00000624700 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
CDKL5-207ENST00000624700 STAC3Q96MF2 364 aa10.16□□□□□ -0.78
CDKL5-207ENST00000624700 FOSBP53539 338 aa10.15□□□□□ -0.78
CDKL5-207ENST00000624700 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
CDKL5-207ENST00000624700 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
CDKL5-207ENST00000624700 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
CDKL5-207ENST00000624700 EVI5O60447 810 aa10.13□□□□□ -0.79
CDKL5-207ENST00000624700 MFSD10Q14728 455 aa10.13□□□□□ -0.79
CDKL5-207ENST00000624700 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
CDKL5-207ENST00000624700 JPH4Q96JJ6 628 aa10.11□□□□□ -0.79
CDKL5-207ENST00000624700 SLC4A5Q9BY07 1137 aa10.11□□□□□ -0.79
CDKL5-207ENST00000624700 PTPREP23469 700 aa10.1□□□□□ -0.79
CDKL5-207ENST00000624700 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
CDKL5-207ENST00000624700 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
CDKL5-207ENST00000624700 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
CDKL5-207ENST00000624700 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
CDKL5-207ENST00000624700 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
CDKL5-207ENST00000624700 CADPS2Q86UW7 1296 aa10.06□□□□□ -0.8
CDKL5-207ENST00000624700 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
CDKL5-207ENST00000624700 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
CDKL5-207ENST00000624700 ZBED2Q9BTP6 218 aa10.04□□□□□ -0.8
CDKL5-207ENST00000624700 BHMG1C9JSJ3 638 aaPredicted RBP10.02□□□□□ -0.81
CDKL5-207ENST00000624700 PCDHGA10Q9Y5H3 936 aa10□□□□□ -0.81
CDKL5-207ENST00000624700 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms