RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 FAM9BQ8IZU0 186 aa4.4□□□□□ -1.7
ATRX-212ENST00000623706 TRIM63Q969Q1 353 aa4.4□□□□□ -1.7
ATRX-212ENST00000623706 PPARGC1BQ86YN6 1023 aaKnown RBP4.4□□□□□ -1.71
ATRX-212ENST00000623706 HMMRO75330 724 aa4.4□□□□□ -1.71
ATRX-212ENST00000623706 DZIP1Q86YF9 867 aaKnown RBP4.39□□□□□ -1.71
ATRX-212ENST00000623706 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
ATRX-212ENST00000623706 PLEKHG5O94827 1062 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 ADRA2BP18089 450 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 CCDC70Q6NSX1 233 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 DCTN1Q14203 1278 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 LCA5Q86VQ0 697 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATRX-212ENST00000623706 GIMAP7Q8NHV1 300 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 CFAP53Q96M91 514 aa4.38□□□□□ -1.71
ATRX-212ENST00000623706 SENP3Q9H4L4 574 aaPredicted RBP4.37□□□□□ -1.71
ATRX-212ENST00000623706 SEPT10Q9P0V9 454 aa4.37□□□□□ -1.71
ATRX-212ENST00000623706 ITGAEP38570 1179 aa4.37□□□□□ -1.71
ATRX-212ENST00000623706 GPATCH11Q8N954 259 aa4.37□□□□□ -1.71
ATRX-212ENST00000623706 PDIA4P13667 645 aaKnown RBP4.37□□□□□ -1.71
ATRX-212ENST00000623706 ZNF622Q969S3 477 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATRX-212ENST00000623706 H0YHG0 523 aa4.37□□□□□ -1.71
ATRX-212ENST00000623706 TCERG1O14776 1098 aaKnown RBP4.36□□□□□ -1.71
ATRX-212ENST00000623706 NPHP1O15259 732 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 CHMP2AO43633 222 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 SEPT8Q92599 483 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 UIMC1Q96RL1 719 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 NF2P35240 595 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 NAP1L1P55209 391 aaKnown RBP4.36□□□□□ -1.71
ATRX-212ENST00000623706 BECN1Q14457 450 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 SRPK2P78362 688 aaKnown RBP4.36□□□□□ -1.71
ATRX-212ENST00000623706 PIAS4Q8N2W9 510 aaPredicted RBP4.36□□□□□ -1.71
ATRX-212ENST00000623706 BTN2A1Q7KYR7 527 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 CLASRPQ8N2M8 674 aaKnown RBP4.36□□□□□ -1.71
ATRX-212ENST00000623706 KNSTRNQ9Y448 316 aa4.36□□□□□ -1.71
ATRX-212ENST00000623706 CALD1Q05682 793 aaKnown RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 PLCD3Q8N3E9 789 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 FAM184BQ9ULE4 1060 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 ERICH4A6NGS2 130 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 CREBRFQ8IUR6 639 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 ZFYVE1Q9HBF4 777 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 E9PSI1 815 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 TSPY4P0CV99 314 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 TSPY10P0CW01 314 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 IBSPP21815 317 aaPredicted RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 BBXQ8WY36 941 aaPredicted RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 ZMAT2Q96NC0 199 aaKnown RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 PAIP2Q9BPZ3 127 aaKnown RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 CHMP4AQ9BY43 222 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 CCDC66A2RUB6 948 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 SEPT6Q14141 434 aa4.35□□□□□ -1.71
ATRX-212ENST00000623706 CCAR2Q8N163 923 aaKnown RBP4.35□□□□□ -1.71
ATRX-212ENST00000623706 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
ATRX-212ENST00000623706 STK31Q9BXU1 1019 aa4.34□□□□□ -1.71
ATRX-212ENST00000623706 FAM13BQ9NYF5 915 aa4.34□□□□□ -1.72
ATRX-212ENST00000623706 FTSJ3Q8IY81 847 aaKnown RBP4.34□□□□□ -1.72
ATRX-212ENST00000623706 WDR66Q8TBY9 1149 aa4.34□□□□□ -1.72
ATRX-212ENST00000623706 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
ATRX-212ENST00000623706 TPM4P67936 248 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 IPO4Q8TEX9 1081 aaKnown RBP4.33□□□□□ -1.72
ATRX-212ENST00000623706 FAM114A2Q9NRY5 505 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
ATRX-212ENST00000623706 PDCL2Q8N4E4 241 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 RBM19Q9Y4C8 960 aaKnown RBP4.33□□□□□ -1.72
ATRX-212ENST00000623706 SEPT14Q6ZU15 432 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.33□□□□□ -1.72
ATRX-212ENST00000623706 DEF6Q9H4E7 631 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 CEP89Q96ST8 783 aa4.33□□□□□ -1.72
ATRX-212ENST00000623706 POLD1P28340 1107 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 SKIDA1Q1XH10 827 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 DDX46Q7L014 1031 aaKnown RBP4.32□□□□□ -1.72
ATRX-212ENST00000623706 RALBP1Q15311 655 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 GOLGA6L10A0A0M3HER8 536 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 GOLGA6L10A6NI86 522 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 GOLGA6L19H0YKK7 550 aa4.32□□□□□ -1.72
ATRX-212ENST00000623706 ARGLU1Q9NWB6 273 aaPredicted RBP4.32□□□□□ -1.72
ATRX-212ENST00000623706 NAP1L2Q9ULW6 460 aaPredicted RBP4.32□□□□□ -1.72
ATRX-212ENST00000623706 TSPY2A6NKD2 308 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 ZRANB2O95218 330 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATRX-212ENST00000623706 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 TSPY1Q01534 308 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 LEKR1Q6ZMV7 388 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 FAM114A1Q8IWE2 563 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 MPHOSPH6Q99547 160 aaKnown RBP4.31□□□□□ -1.72
ATRX-212ENST00000623706 FOSBP53539 338 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 GNL2Q13823 731 aaKnown RBP4.31□□□□□ -1.72
ATRX-212ENST00000623706 FAM50AQ14320 339 aaKnown RBP4.31□□□□□ -1.72
ATRX-212ENST00000623706 DDX12PQ92771 950 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 FOSL2P15408 326 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 ACIN1Q9UKV3 1341 aaKnown RBP4.31□□□□□ -1.72
ATRX-212ENST00000623706 WDR70Q9NW82 654 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 GIGYF2Q6Y7W6 1299 aaKnown RBP4.31□□□□□ -1.72
ATRX-212ENST00000623706 CCDC34Q96HJ3 373 aa4.31□□□□□ -1.72
ATRX-212ENST00000623706 SCAF1Q9H7N4 1312 aaKnown RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 SHQ1Q6PI26 577 aaKnown RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 BCL11BQ9C0K0 894 aaPredicted RBP4.3□□□□□ -1.72
ATRX-212ENST00000623706 INCENPQ9NQS7 918 aa4.3□□□□□ -1.72
ATRX-212ENST00000623706 MRVI1Q9Y6F6 885 aa4.3□□□□□ -1.72
ATRX-212ENST00000623706 DPF3Q92784 378 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms