RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 CFAP43Q8NDM7 1665 aa9.64□□□□□ -0.87
LINC00963-215ENST00000622972 COL17A1Q9UMD9 1497 aaPredicted RBP9.63□□□□□ -0.87
LINC00963-215ENST00000622972 EFCAB5A4FU69 1503 aa9.62□□□□□ -0.87
LINC00963-215ENST00000622972 ATP10BO94823 1461 aa9.62□□□□□ -0.87
LINC00963-215ENST00000622972 LOC105371045A0A1W2PR82 267 aa9.62□□□□□ -0.87
LINC00963-215ENST00000622972 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
LINC00963-215ENST00000622972 FHOD3Q2V2M9 1422 aa9.62□□□□□ -0.87
LINC00963-215ENST00000622972 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
LINC00963-215ENST00000622972 RAPGEF6Q8TEU7 1601 aa9.61□□□□□ -0.87
LINC00963-215ENST00000622972 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
LINC00963-215ENST00000622972 SPDYE4A6NLX3 237 aa9.59□□□□□ -0.87
LINC00963-215ENST00000622972 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
LINC00963-215ENST00000622972 PCF11O94913 1555 aaKnown RBP9.58□□□□□ -0.88
LINC00963-215ENST00000622972 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
LINC00963-215ENST00000622972 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
LINC00963-215ENST00000622972 ABCA9Q8IUA7 1624 aa9.55□□□□□ -0.88
LINC00963-215ENST00000622972 CLIP1P30622 1438 aa9.55□□□□□ -0.88
LINC00963-215ENST00000622972 NUP153P49790 1475 aaKnown RBP9.54□□□□□ -0.88
LINC00963-215ENST00000622972 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
LINC00963-215ENST00000622972 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
LINC00963-215ENST00000622972 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
LINC00963-215ENST00000622972 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
LINC00963-215ENST00000622972 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
LINC00963-215ENST00000622972 ZNF692Q9BU19 519 aaPredicted RBP9.53□□□□□ -0.88
LINC00963-215ENST00000622972 ARID4BQ4LE39 1312 aaPredicted RBP9.53□□□□□ -0.88
LINC00963-215ENST00000622972 ARAP3Q8WWN8 1544 aa9.52□□□□□ -0.88
LINC00963-215ENST00000622972 NEO1Q92859 1461 aa9.52□□□□□ -0.89
LINC00963-215ENST00000622972 CDK13Q14004 1512 aaKnown RBP9.51□□□□□ -0.89
LINC00963-215ENST00000622972 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
LINC00963-215ENST00000622972 RBM42Q9BTD8 480 aaKnown RBP9.49□□□□□ -0.89
LINC00963-215ENST00000622972 CDK11AQ9UQ88 783 aaPredicted RBP9.49□□□□□ -0.89
LINC00963-215ENST00000622972 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
LINC00963-215ENST00000622972 CFAP74Q9C0B2 1584 aa9.48□□□□□ -0.89
LINC00963-215ENST00000622972 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
LINC00963-215ENST00000622972 FANCAO15360 1455 aa9.47□□□□□ -0.89
LINC00963-215ENST00000622972 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
LINC00963-215ENST00000622972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.47□□□□□ -0.892e-6■■■□□ 16.6
LINC00963-215ENST00000622972 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
LINC00963-215ENST00000622972 TTC37Q6PGP7 1564 aa9.46□□□□□ -0.89
LINC00963-215ENST00000622972 MYT1LQ9UL68 1186 aa9.46□□□□□ -0.9
LINC00963-215ENST00000622972 CASKIN1Q8WXD9 1431 aa9.46□□□□□ -0.9
LINC00963-215ENST00000622972 FYCO1Q9BQS8 1478 aa9.46□□□□□ -0.9
LINC00963-215ENST00000622972 KIF14Q15058 1648 aa9.45□□□□□ -0.9
LINC00963-215ENST00000622972 FRMPD1Q5SYB0 1578 aa9.44□□□□□ -0.9
LINC00963-215ENST00000622972 MLECQ14165 292 aa9.43□□□□□ -0.9
LINC00963-215ENST00000622972 EFCAB2Q5VUJ9 269 aa9.43□□□□□ -0.9
LINC00963-215ENST00000622972 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
LINC00963-215ENST00000622972 RICTORQ6R327 1708 aa9.42□□□□□ -0.9
LINC00963-215ENST00000622972 VPS8Q8N3P4 1428 aa9.42□□□□□ -0.9
LINC00963-215ENST00000622972 SCAPERQ9BY12 1400 aa9.42□□□□□ -0.9
LINC00963-215ENST00000622972 BCORL1Q5H9F3 1711 aa9.42□□□□□ -0.9
LINC00963-215ENST00000622972 MYO5CQ9NQX4 1742 aa9.42□□□□□ -0.9
LINC00963-215ENST00000622972 TIAM1Q13009 1591 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 PTPRMP28827 1452 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 PLCH2O75038 1416 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 POGZQ7Z3K3 1410 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 ADAMTSL3P82987 1691 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
LINC00963-215ENST00000622972 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.9
LINC00963-215ENST00000622972 MADDQ8WXG6 1647 aa9.4□□□□□ -0.9
LINC00963-215ENST00000622972 ARHGAP5Q13017 1502 aa9.4□□□□□ -0.91
LINC00963-215ENST00000622972 RIMS1Q86UR5 1692 aaKnown RBP9.39□□□□□ -0.91
LINC00963-215ENST00000622972 ILDR1Q86SU0 546 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-215ENST00000622972 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
LINC00963-215ENST00000622972 YEATS2Q9ULM3 1422 aa9.39□□□□□ -0.91
LINC00963-215ENST00000622972 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
LINC00963-215ENST00000622972 PROM2Q8N271 834 aa9.38□□□□□ -0.91
LINC00963-215ENST00000622972 CDC42BPBQ9Y5S2 1711 aa9.38□□□□□ -0.91
LINC00963-215ENST00000622972 MAGI2Q86UL8 1455 aa9.38□□□□□ -0.91
LINC00963-215ENST00000622972 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
LINC00963-215ENST00000622972 AFAP1Q8N556 730 aa9.36□□□□□ -0.91
LINC00963-215ENST00000622972 AKT1S1Q96B36 256 aa9.36□□□□□ -0.91
LINC00963-215ENST00000622972 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
LINC00963-215ENST00000622972 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
LINC00963-215ENST00000622972 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 ATP10AO60312 1499 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 ZNF518AQ6AHZ1 1483 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 C9orf84Q5VXU9 1444 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
LINC00963-215ENST00000622972 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 FER1L4A9Z1Z3 1794 aa9.34□□□□□ -0.91
LINC00963-215ENST00000622972 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
LINC00963-215ENST00000622972 SIGLEC1Q9BZZ2 1709 aa9.32□□□□□ -0.92
LINC00963-215ENST00000622972 HSPA2P54652 639 aa9.32□□□□□ -0.92
LINC00963-215ENST00000622972 SUPT6HQ7KZ85 1726 aaKnown RBP9.31□□□□□ -0.92
LINC00963-215ENST00000622972 LRRC9Q6ZRR7 1453 aa9.31□□□□□ -0.92
LINC00963-215ENST00000622972 LMTK3Q96Q04 1460 aa9.3□□□□□ -0.92
LINC00963-215ENST00000622972 MTUS2Q5JR59 1369 aa9.3□□□□□ -0.92
LINC00963-215ENST00000622972 CEBPAP49715 358 aaPredicted RBP9.3□□□□□ -0.92
LINC00963-215ENST00000622972 KANK4Q5T7N3 995 aaPredicted RBP9.3□□□□□ -0.92
LINC00963-215ENST00000622972 KDM5CP41229 1560 aa9.29□□□□□ -0.92
LINC00963-215ENST00000622972 SAMD9LQ8IVG5 1584 aa9.29□□□□□ -0.92
LINC00963-215ENST00000622972 CFDP1Q9UEE9 299 aaPredicted RBP9.29□□□□□ -0.92
LINC00963-215ENST00000622972 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
LINC00963-215ENST00000622972 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
LINC00963-215ENST00000622972 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
LINC00963-215ENST00000622972 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
LINC00963-215ENST00000622972 CCNB3Q8WWL7 1395 aa9.28□□□□□ -0.92
LINC00963-215ENST00000622972 ABCC1P33527 1531 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms