RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SCAPERQ9BY12 1400 aa20.99■□□□□ 0.95
ATRX-208ENST00000622960 ZFYVE16Q7Z3T8 1539 aa20.98■□□□□ 0.95
ATRX-208ENST00000622960 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
ATRX-208ENST00000622960 MAGI2Q86UL8 1455 aa20.97■□□□□ 0.95
ATRX-208ENST00000622960 CEP162Q5TB80 1403 aa20.95■□□□□ 0.95
ATRX-208ENST00000622960 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
ATRX-208ENST00000622960 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
ATRX-208ENST00000622960 BCORL1Q5H9F3 1711 aa20.91■□□□□ 0.94
ATRX-208ENST00000622960 CDC42BPBQ9Y5S2 1711 aa20.9■□□□□ 0.94
ATRX-208ENST00000622960 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
ATRX-208ENST00000622960 ADAMTSL3P82987 1691 aa20.89■□□□□ 0.93
ATRX-208ENST00000622960 MTUS2Q5JR59 1369 aa20.88■□□□□ 0.93
ATRX-208ENST00000622960 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
ATRX-208ENST00000622960 CDC42BPAQ5VT25 1732 aa20.86■□□□□ 0.93
ATRX-208ENST00000622960 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
ATRX-208ENST00000622960 HECW2Q9P2P5 1572 aa20.85■□□□□ 0.93
ATRX-208ENST00000622960 ABCC1P33527 1531 aa20.84■□□□□ 0.93
ATRX-208ENST00000622960 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
ATRX-208ENST00000622960 KDM5CP41229 1560 aa20.84■□□□□ 0.93
ATRX-208ENST00000622960 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.93
ATRX-208ENST00000622960 PTPRMP28827 1452 aa20.83■□□□□ 0.93
ATRX-208ENST00000622960 ITSN2Q9NZM3 1697 aa20.83■□□□□ 0.92
ATRX-208ENST00000622960 ATP10AO60312 1499 aa20.82■□□□□ 0.92
ATRX-208ENST00000622960 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
ATRX-208ENST00000622960 RIMS1Q86UR5 1692 aaKnown RBP20.8■□□□□ 0.92
ATRX-208ENST00000622960 ZNF777Q9ULD5 760 aaPredicted RBP20.8■□□□□ 0.92
ATRX-208ENST00000622960 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
ATRX-208ENST00000622960 PLEKHH2Q8IVE3 1493 aa20.77■□□□□ 0.92
ATRX-208ENST00000622960 GPATCH8Q9UKJ3 1502 aaKnown RBP20.77■□□□□ 0.92
ATRX-208ENST00000622960 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
ATRX-208ENST00000622960 FER1L4A9Z1Z3 1794 aa20.76■□□□□ 0.91
ATRX-208ENST00000622960 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
ATRX-208ENST00000622960 MLECQ14165 292 aa20.75■□□□□ 0.91
ATRX-208ENST00000622960 SAMD9LQ8IVG5 1584 aa20.75■□□□□ 0.91
ATRX-208ENST00000622960 DIP2CQ9Y2E4 1556 aa20.75■□□□□ 0.91
ATRX-208ENST00000622960 SYCP2Q9BX26 1530 aa20.74■□□□□ 0.91
ATRX-208ENST00000622960 VPS8Q8N3P4 1428 aa20.74■□□□□ 0.91
ATRX-208ENST00000622960 SIGLEC1Q9BZZ2 1709 aa20.73■□□□□ 0.91
ATRX-208ENST00000622960 TRAPPC8Q9Y2L5 1435 aa20.73■□□□□ 0.91
ATRX-208ENST00000622960 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
ATRX-208ENST00000622960 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
ATRX-208ENST00000622960 ABCA6Q8N139 1617 aa20.72■□□□□ 0.91
ATRX-208ENST00000622960 SUPT6HQ7KZ85 1726 aaKnown RBP20.72■□□□□ 0.91
ATRX-208ENST00000622960 ARHGEF12Q9NZN5 1544 aa20.72■□□□□ 0.91
ATRX-208ENST00000622960 TIAM1Q13009 1591 aa20.71■□□□□ 0.91
ATRX-208ENST00000622960 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
ATRX-208ENST00000622960 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
ATRX-208ENST00000622960 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
ATRX-208ENST00000622960 ESF1Q9H501 851 aaKnown RBP20.67■□□□□ 0.9
ATRX-208ENST00000622960 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
ATRX-208ENST00000622960 ATP7AQ04656 1500 aa20.65■□□□□ 0.9
ATRX-208ENST00000622960 HNRNPMP52272 730 aaKnown RBP eCLIP20.65■□□□□ 0.91e-7■■■■■ 32.5
ATRX-208ENST00000622960 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
ATRX-208ENST00000622960 AGLP35573 1532 aa20.63■□□□□ 0.89
ATRX-208ENST00000622960 ILDR1Q86SU0 546 aaPredicted RBP20.62■□□□□ 0.89
ATRX-208ENST00000622960 INO80Q9ULG1 1556 aaPredicted RBP20.62■□□□□ 0.89
ATRX-208ENST00000622960 APLP2Q06481 763 aa20.61■□□□□ 0.89
ATRX-208ENST00000622960 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
ATRX-208ENST00000622960 MAP3K1Q13233 1512 aa20.59■□□□□ 0.89
ATRX-208ENST00000622960 LMTK3Q96Q04 1460 aa20.59■□□□□ 0.89
ATRX-208ENST00000622960 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
ATRX-208ENST00000622960 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
ATRX-208ENST00000622960 PREX1Q8TCU6 1659 aa20.55■□□□□ 0.88
ATRX-208ENST00000622960 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
ATRX-208ENST00000622960 A2MP01023 1474 aa20.55■□□□□ 0.88
ATRX-208ENST00000622960 CCDC141Q6ZP82 1450 aa20.55■□□□□ 0.88
ATRX-208ENST00000622960 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
ATRX-208ENST00000622960 RSPH4AQ5TD94 716 aa20.53■□□□□ 0.88
ATRX-208ENST00000622960 MBD5Q9P267 1494 aa20.52■□□□□ 0.88
ATRX-208ENST00000622960 PLXNC1O60486 1568 aa20.51■□□□□ 0.87
ATRX-208ENST00000622960 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
ATRX-208ENST00000622960 C3P01024 1663 aa20.49■□□□□ 0.87
ATRX-208ENST00000622960 UHRF1BP1Q6BDS2 1440 aa20.49■□□□□ 0.87
ATRX-208ENST00000622960 ARHGEF5Q12774 1597 aa20.48■□□□□ 0.87
ATRX-208ENST00000622960 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
ATRX-208ENST00000622960 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
ATRX-208ENST00000622960 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
ATRX-208ENST00000622960 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
ATRX-208ENST00000622960 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
ATRX-208ENST00000622960 HSPA2P54652 639 aa20.45■□□□□ 0.86
ATRX-208ENST00000622960 MIA2Q96PC5 1412 aa20.44■□□□□ 0.86
ATRX-208ENST00000622960 KANK4Q5T7N3 995 aaPredicted RBP20.44■□□□□ 0.86
ATRX-208ENST00000622960 GGT6Q6P531 493 aa20.43■□□□□ 0.86
ATRX-208ENST00000622960 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
ATRX-208ENST00000622960 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
ATRX-208ENST00000622960 SETD1BQ9UPS6 1966 aaKnown RBP20.41■□□□□ 0.86
ATRX-208ENST00000622960 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
ATRX-208ENST00000622960 NPATQ14207 1427 aa20.39■□□□□ 0.85
ATRX-208ENST00000622960 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
ATRX-208ENST00000622960 MAST1Q9Y2H9 1570 aa20.37■□□□□ 0.85
ATRX-208ENST00000622960 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
ATRX-208ENST00000622960 KIF3BO15066 747 aa20.35■□□□□ 0.85
ATRX-208ENST00000622960 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
ATRX-208ENST00000622960 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
ATRX-208ENST00000622960 KDM5DQ9BY66 1539 aa20.33■□□□□ 0.85
ATRX-208ENST00000622960 CROCC2H7BZ55 1655 aa20.3■□□□□ 0.84
ATRX-208ENST00000622960 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
ATRX-208ENST00000622960 EIF2AK4Q9P2K8 1649 aaKnown RBP20.3■□□□□ 0.84
ATRX-208ENST00000622960 SHANK2Q9UPX8 1470 aa20.3■□□□□ 0.84
ATRX-208ENST00000622960 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms