RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-222	ENST00000622838	CHGA	P10645	457 aa	Known RBP	7.86	□□□□□ -1.15
SEM1-222	ENST00000622838	IFNL1	Q8IU54	200 aa		7.85	□□□□□ -1.15
SEM1-222	ENST00000622838	SPOCK2	Q92563	424 aa		7.85	□□□□□ -1.15
SEM1-222	ENST00000622838	FAM212A	Q96EL1	285 aa		7.85	□□□□□ -1.15
SEM1-222	ENST00000622838	LOC105371045	A0A1W2PR82	267 aa		7.84	□□□□□ -1.15
SEM1-222	ENST00000622838	OCEL1	Q9H607	264 aa		7.84	□□□□□ -1.15
SEM1-222	ENST00000622838	RSPH6A	Q9H0K4	717 aa		7.81	□□□□□ -1.16
SEM1-222	ENST00000622838	ZBTB7C	A1YPR0	619 aa		7.8	□□□□□ -1.16
SEM1-222	ENST00000622838	NEUROD2	Q15784	382 aa		7.8	□□□□□ -1.16
SEM1-222	ENST00000622838	RNF166	Q96A37	237 aa	Predicted RBP	7.8	□□□□□ -1.16
SEM1-222	ENST00000622838	ZMYND15	Q9H091	742 aa		7.8	□□□□□ -1.16
SEM1-222	ENST00000622838	LMOD2	Q6P5Q4	547 aa		7.79	□□□□□ -1.16
SEM1-222	ENST00000622838	ARID3A	Q99856	593 aa		7.79	□□□□□ -1.16
SEM1-222	ENST00000622838	NUBP1	P53384	320 aa		7.77	□□□□□ -1.17
SEM1-222	ENST00000622838	DCAF8	Q5TAQ9	597 aa		7.74	□□□□□ -1.17
SEM1-222	ENST00000622838	HS6ST3	Q8IZP7	471 aa		7.74	□□□□□ -1.17
SEM1-222	ENST00000622838	C1orf115	Q9H7X2	142 aa		7.74	□□□□□ -1.17
SEM1-222	ENST00000622838	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
SEM1-222	ENST00000622838	PDIA4	P13667	645 aa	Known RBP	7.72	□□□□□ -1.17
SEM1-222	ENST00000622838	NECTIN2	Q92692	538 aa		7.72	□□□□□ -1.17
SEM1-222	ENST00000622838	C3orf67	Q6ZVT6	689 aa		7.71	□□□□□ -1.18
SEM1-222	ENST00000622838	MYT1L	Q9UL68	1186 aa		7.7	□□□□□ -1.18
SEM1-222	ENST00000622838	IGSF3	O75054	1194 aa		7.69	□□□□□ -1.18
SEM1-222	ENST00000622838	PYGB	P11216	843 aa		7.69	□□□□□ -1.18
SEM1-222	ENST00000622838	GOLGA2	Q08379	1002 aa		7.69	□□□□□ -1.18
SEM1-222	ENST00000622838	P3H3	Q8IVL6	736 aa		7.69	□□□□□ -1.18
SEM1-222	ENST00000622838	PDCD7	Q8N8D1	485 aa	Known RBP	7.68	□□□□□ -1.18
SEM1-222	ENST00000622838	NKX1-1	Q15270	411 aa	Predicted RBP	7.65	□□□□□ -1.18
SEM1-222	ENST00000622838	L3MBTL3	Q96JM7	780 aa	Predicted RBP	7.65	□□□□□ -1.18
SEM1-222	ENST00000622838	SHROOM4	Q9ULL8	1493 aa		7.65	□□□□□ -1.18
SEM1-222	ENST00000622838	PCDHB8	Q9UN66	801 aa		7.65	□□□□□ -1.18
SEM1-222	ENST00000622838	HOXB3	P14651	431 aa	Predicted RBP	7.64	□□□□□ -1.19
SEM1-222	ENST00000622838	SLC24A3	Q9HC58	644 aa		7.64	□□□□□ -1.19
SEM1-222	ENST00000622838	ERBB3	P21860	1342 aa		7.63	□□□□□ -1.19
SEM1-222	ENST00000622838	GTPBP6	O43824	516 aa	Predicted RBP	7.63	□□□□□ -1.19
SEM1-222	ENST00000622838	CDK11B	P21127	795 aa	Known RBP	7.63	□□□□□ -1.19
SEM1-222	ENST00000622838	ZC3H15	Q8WU90	426 aa	Known RBP	7.63	□□□□□ -1.19
SEM1-222	ENST00000622838	CDK11A	Q9UQ88	783 aa	Predicted RBP	7.63	□□□□□ -1.19
SEM1-222	ENST00000622838	HOXB1	P14653	301 aa	Predicted RBP	7.62	□□□□□ -1.19
SEM1-222	ENST00000622838	MKRN3	Q13064	507 aa	Known RBP	7.62	□□□□□ -1.19
SEM1-222	ENST00000622838	GSE1	Q14687	1217 aa		7.62	□□□□□ -1.19
SEM1-222	ENST00000622838	ZNF467	Q7Z7K2	595 aa	Predicted RBP	7.62	□□□□□ -1.19
SEM1-222	ENST00000622838	ARID3C	A6NKF2	412 aa		7.61	□□□□□ -1.19
SEM1-222	ENST00000622838	HMGB1	P09429	215 aa	Known RBP	7.61	□□□□□ -1.19
SEM1-222	ENST00000622838	KCTD17	Q8N5Z5	321 aa		7.6	□□□□□ -1.19
SEM1-222	ENST00000622838	HSP90B1	P14625	803 aa	Known RBP	7.59	□□□□□ -1.19
SEM1-222	ENST00000622838	KCNV2	Q8TDN2	545 aa		7.59	□□□□□ -1.19
SEM1-222	ENST00000622838	APBB1	O00213	710 aa		7.57	□□□□□ -1.2
SEM1-222	ENST00000622838	VARS2	Q5ST30	1063 aa	Known RBP	7.57	□□□□□ -1.2
SEM1-222	ENST00000622838	ZNF710	Q8N1W2	664 aa		7.57	□□□□□ -1.2
SEM1-222	ENST00000622838	CIZ1	Q9ULV3	898 aa	Predicted RBP	7.56	□□□□□ -1.2
SEM1-222	ENST00000622838		G3V3G9	751 aa		7.55	□□□□□ -1.2
SEM1-222	ENST00000622838	RAD21	O60216	631 aa		7.55	□□□□□ -1.2
SEM1-222	ENST00000622838	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
SEM1-222	ENST00000622838	RGS22	Q8NE09	1264 aa		7.54	□□□□□ -1.2
SEM1-222	ENST00000622838	ZNF687	Q8N1G0	1237 aa		7.53	□□□□□ -1.2
SEM1-222	ENST00000622838	RNF25	Q96BH1	459 aa	Predicted RBP	7.53	□□□□□ -1.2
SEM1-222	ENST00000622838	PTGER2	P43116	358 aa		7.52	□□□□□ -1.21
SEM1-222	ENST00000622838	PSEN1	P49768	467 aa		7.52	□□□□□ -1.21
SEM1-222	ENST00000622838	DPY19L2	Q6NUT2	758 aa		7.51	□□□□□ -1.21
SEM1-222	ENST00000622838	TRIM41	Q8WV44	630 aa		7.51	□□□□□ -1.21
SEM1-222	ENST00000622838	PUS7	Q96PZ0	661 aa	Known RBP	7.51	□□□□□ -1.21
SEM1-222	ENST00000622838	CHRM1	P11229	460 aa	Predicted RBP	7.5	□□□□□ -1.21
SEM1-222	ENST00000622838	DOK7	Q18PE1	504 aa		7.5	□□□□□ -1.21
SEM1-222	ENST00000622838	CHMP4A	Q9BY43	222 aa		7.5	□□□□□ -1.21
SEM1-222	ENST00000622838	PLA2G2E	Q9NZK7	142 aa		7.5	□□□□□ -1.21
SEM1-222	ENST00000622838	PDAP1	Q13442	181 aa	Known RBP	7.49	□□□□□ -1.21
SEM1-222	ENST00000622838	CCDC82	Q8N4S0	544 aa		7.49	□□□□□ -1.21
SEM1-222	ENST00000622838	MTMR7	Q9Y216	660 aa		7.49	□□□□□ -1.21
SEM1-222	ENST00000622838	TRAIP	Q9BWF2	469 aa		7.48	□□□□□ -1.21
SEM1-222	ENST00000622838	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.48	□□□□□ -1.21
SEM1-222	ENST00000622838	ANKRD13D	Q6ZTN6	518 aa		7.47	□□□□□ -1.21
SEM1-222	ENST00000622838	ILDR1	Q86SU0	546 aa	Predicted RBP	7.47	□□□□□ -1.21
SEM1-222	ENST00000622838	ZMYND10	O75800	440 aa		7.46	□□□□□ -1.22
SEM1-222	ENST00000622838	IL27	Q8NEV9	243 aa		7.46	□□□□□ -1.22
SEM1-222	ENST00000622838	RBM25	P49756	843 aa	Known RBP	7.45	□□□□□ -1.22
SEM1-222	ENST00000622838	CABP2	Q9NPB3	220 aa		7.45	□□□□□ -1.22
SEM1-222	ENST00000622838	TMCO4	Q5TGY1	634 aa		7.44	□□□□□ -1.22
SEM1-222	ENST00000622838	ZNF428	Q96B54	188 aa		7.44	□□□□□ -1.22
SEM1-222	ENST00000622838	BOLA1	Q9Y3E2	137 aa		7.44	□□□□□ -1.22
SEM1-222	ENST00000622838	RIMBP2	O15034	1052 aa		7.43	□□□□□ -1.22
SEM1-222	ENST00000622838	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.43	□□□□□ -1.22
SEM1-222	ENST00000622838	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.43	□□□□□ -1.22
SEM1-222	ENST00000622838	MFAP1	P55081	439 aa	Known RBP	7.42	□□□□□ -1.22
SEM1-222	ENST00000622838	AEBP1	Q8IUX7	1158 aa		7.42	□□□□□ -1.22
SEM1-222	ENST00000622838	WDR70	Q9NW82	654 aa		7.42	□□□□□ -1.22
SEM1-222	ENST00000622838	KDM4C	Q9H3R0	1056 aa		7.4	□□□□□ -1.22
SEM1-222	ENST00000622838	RYDEN	Q9NUL5	291 aa	Known RBP	7.4	□□□□□ -1.22
SEM1-222	ENST00000622838	TESPA1	A2RU30	521 aa	Predicted RBP	7.39	□□□□□ -1.23
SEM1-222	ENST00000622838	STK25	O00506	426 aa		7.39	□□□□□ -1.23
SEM1-222	ENST00000622838	GPR153	Q6NV75	609 aa		7.39	□□□□□ -1.23
SEM1-222	ENST00000622838	RIOK3	O14730	519 aa	Known RBP	7.38	□□□□□ -1.23
SEM1-222	ENST00000622838	FLII	Q13045	1269 aa		7.38	□□□□□ -1.23
SEM1-222	ENST00000622838	CADPS2	Q86UW7	1296 aa		7.38	□□□□□ -1.23
SEM1-222	ENST00000622838	LSM11	P83369	360 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
SEM1-222	ENST00000622838	BARGIN	Q6ZT62	677 aa		7.37	□□□□□ -1.23
SEM1-222	ENST00000622838	ZSWIM6	Q9HCJ5	1215 aa		7.37	□□□□□ -1.23
SEM1-222	ENST00000622838	HCST	Q9UBK5	93 aa		7.36	□□□□□ -1.23
SEM1-222	ENST00000622838	SEMA3E	O15041	775 aa		7.35	□□□□□ -1.23
SEM1-222	ENST00000622838	ARHGEF1	Q92888	912 aa	Known RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms