RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 AKNAQ7Z591 1439 aa30.73■■■□□ 2.51
PDLIM2-221ENST00000622702 EFCAB2Q5VUJ9 269 aa30.7■■■□□ 2.51
PDLIM2-221ENST00000622702 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
PDLIM2-221ENST00000622702 CDC42BPBQ9Y5S2 1711 aa30.69■■■□□ 2.5
PDLIM2-221ENST00000622702 CDC42BPAQ5VT25 1732 aa30.69■■■□□ 2.5
PDLIM2-221ENST00000622702 PREX2Q70Z35 1606 aa30.68■■■□□ 2.5
PDLIM2-221ENST00000622702 RAPGEF3O95398 923 aa30.64■■■□□ 2.5
PDLIM2-221ENST00000622702 CCNB3Q8WWL7 1395 aa30.64■■■□□ 2.5
PDLIM2-221ENST00000622702 GPATCH8Q9UKJ3 1502 aaKnown RBP30.63■■■□□ 2.49
PDLIM2-221ENST00000622702 ADGRL1O94910 1474 aa30.63■■■□□ 2.49
PDLIM2-221ENST00000622702 DENND4BO75064 1496 aaPredicted RBP30.61■■■□□ 2.49
PDLIM2-221ENST00000622702 SCAPERQ9BY12 1400 aa30.59■■■□□ 2.49
PDLIM2-221ENST00000622702 MYOM3Q5VTT5 1437 aa30.58■■■□□ 2.49
PDLIM2-221ENST00000622702 FRMPD1Q5SYB0 1578 aa30.57■■■□□ 2.48
PDLIM2-221ENST00000622702 RICTORQ6R327 1708 aa30.57■■■□□ 2.48
PDLIM2-221ENST00000622702 ITSN2Q9NZM3 1697 aa30.56■■■□□ 2.48
PDLIM2-221ENST00000622702 CFDP1Q9UEE9 299 aaPredicted RBP30.55■■■□□ 2.48
PDLIM2-221ENST00000622702 ZNF777Q9ULD5 760 aaPredicted RBP30.54■■■□□ 2.48
PDLIM2-221ENST00000622702 MIA2Q96PC5 1412 aa30.51■■■□□ 2.47
PDLIM2-221ENST00000622702 POGZQ7Z3K3 1410 aa30.5■■■□□ 2.47
PDLIM2-221ENST00000622702 ABCC1P33527 1531 aa30.49■■■□□ 2.47
PDLIM2-221ENST00000622702 SAMD9LQ8IVG5 1584 aa30.49■■■□□ 2.47
PDLIM2-221ENST00000622702 FGD6Q6ZV73 1430 aa30.48■■■□□ 2.47
PDLIM2-221ENST00000622702 ARHGEF12Q9NZN5 1544 aa30.45■■■□□ 2.46
PDLIM2-221ENST00000622702 ZMYM4Q5VZL5 1548 aa30.43■■■□□ 2.46
PDLIM2-221ENST00000622702 ZNF518AQ6AHZ1 1483 aa30.43■■■□□ 2.46
PDLIM2-221ENST00000622702 AFAP1Q8N556 730 aa30.42■■■□□ 2.46
PDLIM2-221ENST00000622702 RRBP1Q9P2E9 1410 aaKnown RBP30.41■■■□□ 2.46
PDLIM2-221ENST00000622702 SYCP2Q9BX26 1530 aa30.4■■■□□ 2.46
PDLIM2-221ENST00000622702 PLEKHH2Q8IVE3 1493 aa30.4■■■□□ 2.46
PDLIM2-221ENST00000622702 TRAPPC8Q9Y2L5 1435 aa30.4■■■□□ 2.46
PDLIM2-221ENST00000622702 ZNF644Q9H582 1327 aaPredicted RBP30.39■■■□□ 2.46
PDLIM2-221ENST00000622702 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
PDLIM2-221ENST00000622702 PTPN23Q9H3S7 1636 aa30.38■■■□□ 2.45
PDLIM2-221ENST00000622702 TCOF1Q13428 1488 aaKnown RBP30.38■■■□□ 2.45
PDLIM2-221ENST00000622702 MAGI2Q86UL8 1455 aa30.37■■■□□ 2.45
PDLIM2-221ENST00000622702 KIAA1107Q9UPP5 1409 aa30.36■■■□□ 2.45
PDLIM2-221ENST00000622702 KDM5CP41229 1560 aa30.36■■■□□ 2.45
PDLIM2-221ENST00000622702 CAMSAP2Q08AD1 1489 aa30.36■■■□□ 2.45
PDLIM2-221ENST00000622702 ZFYVE16Q7Z3T8 1539 aa30.35■■■□□ 2.45
PDLIM2-221ENST00000622702 ARHGEF40Q8TER5 1519 aa30.35■■■□□ 2.45
PDLIM2-221ENST00000622702 YEATS2Q9ULM3 1422 aa30.33■■■□□ 2.45
PDLIM2-221ENST00000622702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.33■■■□□ 2.45
PDLIM2-221ENST00000622702 MYT1LQ9UL68 1186 aa30.31■■■□□ 2.44
PDLIM2-221ENST00000622702 HECW2Q9P2P5 1572 aa30.3■■■□□ 2.44
PDLIM2-221ENST00000622702 MLH3Q9UHC1 1453 aa30.28■■■□□ 2.44
PDLIM2-221ENST00000622702 FAM50AQ14320 339 aaKnown RBP30.27■■■□□ 2.44
PDLIM2-221ENST00000622702 MBD5Q9P267 1494 aa30.27■■■□□ 2.44
PDLIM2-221ENST00000622702 SPAG9O60271 1321 aaKnown RBP30.23■■■□□ 2.43
PDLIM2-221ENST00000622702 ARHGEF5Q12774 1597 aa30.22■■■□□ 2.43
PDLIM2-221ENST00000622702 KIDINS220Q9ULH0 1771 aa30.22■■■□□ 2.43
PDLIM2-221ENST00000622702 ATP10AO60312 1499 aa30.22■■■□□ 2.43
PDLIM2-221ENST00000622702 KDM4FA0A1W2PPD8 638 aa30.21■■■□□ 2.43
PDLIM2-221ENST00000622702 RSPH4AQ5TD94 716 aa30.21■■■□□ 2.43
PDLIM2-221ENST00000622702 ABCA6Q8N139 1617 aa30.19■■■□□ 2.42
PDLIM2-221ENST00000622702 ARID4BQ4LE39 1312 aaPredicted RBP30.19■■■□□ 2.42
PDLIM2-221ENST00000622702 DIP2CQ9Y2E4 1556 aa30.19■■■□□ 2.42
PDLIM2-221ENST00000622702 CCDC141Q6ZP82 1450 aa30.18■■■□□ 2.42
PDLIM2-221ENST00000622702 DNMT1P26358 1616 aaKnown RBP30.17■■■□□ 2.42
PDLIM2-221ENST00000622702 C9orf84Q5VXU9 1444 aa30.16■■■□□ 2.42
PDLIM2-221ENST00000622702 INO80Q9ULG1 1556 aaPredicted RBP30.16■■■□□ 2.42
PDLIM2-221ENST00000622702 ATP7AQ04656 1500 aa30.16■■■□□ 2.42
PDLIM2-221ENST00000622702 SIGLEC1Q9BZZ2 1709 aa30.16■■■□□ 2.42
PDLIM2-221ENST00000622702 ABCC5O15440 1437 aa30.16■■■□□ 2.42
PDLIM2-221ENST00000622702 DAPK1P53355 1430 aa30.15■■■□□ 2.42
PDLIM2-221ENST00000622702 TRIM26Q12899 539 aaPredicted RBP30.12■■■□□ 2.41
PDLIM2-221ENST00000622702 SHANK2Q9UPX8 1470 aa30.09■■■□□ 2.41
PDLIM2-221ENST00000622702 BCORL1Q5H9F3 1711 aa30.09■■■□□ 2.41
PDLIM2-221ENST00000622702 REREQ9P2R6 1566 aa30.08■■■□□ 2.41
PDLIM2-221ENST00000622702 TSPY4P0CV99 314 aa30.08■■■□□ 2.41
PDLIM2-221ENST00000622702 TSPY10P0CW01 314 aa30.08■■■□□ 2.41
PDLIM2-221ENST00000622702 RTEL1-TNFRSF6BF6WH68 1400 aa30.08■■■□□ 2.41
PDLIM2-221ENST00000622702 CROCC2H7BZ55 1655 aa30.08■■■□□ 2.41
PDLIM2-221ENST00000622702 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
PDLIM2-221ENST00000622702 PTPRKQ15262 1439 aa30.06■■■□□ 2.4
PDLIM2-221ENST00000622702 MAST1Q9Y2H9 1570 aa30.04■■■□□ 2.4
PDLIM2-221ENST00000622702 ITGAEP38570 1179 aa30.04■■■□□ 2.4
PDLIM2-221ENST00000622702 ADAMTSL3P82987 1691 aa30.03■■■□□ 2.4
PDLIM2-221ENST00000622702 MLECQ14165 292 aa30.03■■■□□ 2.4
PDLIM2-221ENST00000622702 ADGBQ8N7X0 1667 aa30.01■■■□□ 2.39
PDLIM2-221ENST00000622702 A2MP01023 1474 aa30■■■□□ 2.39
PDLIM2-221ENST00000622702 AGLP35573 1532 aa29.98■■■□□ 2.39
PDLIM2-221ENST00000622702 ADGRL2O95490 1459 aa29.98■■■□□ 2.39
PDLIM2-221ENST00000622702 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
PDLIM2-221ENST00000622702 ROCK1Q13464 1354 aa29.96■■■□□ 2.39
PDLIM2-221ENST00000622702 PLXNC1O60486 1568 aa29.96■■■□□ 2.39
PDLIM2-221ENST00000622702 CHIC2Q9UKJ5 165 aa29.95■■■□□ 2.39
PDLIM2-221ENST00000622702 NCOA1Q15788 1441 aa29.93■■■□□ 2.38
PDLIM2-221ENST00000622702 ANKRD30AQ9BXX3 1397 aa29.93■■■□□ 2.38
PDLIM2-221ENST00000622702 DHX29Q7Z478 1369 aaKnown RBP29.91■■■□□ 2.38
PDLIM2-221ENST00000622702 RIMS1Q86UR5 1692 aaKnown RBP29.89■■■□□ 2.38
PDLIM2-221ENST00000622702 FER1L4A9Z1Z3 1794 aa29.89■■■□□ 2.38
PDLIM2-221ENST00000622702 PTPRMP28827 1452 aa29.86■■■□□ 2.37
PDLIM2-221ENST00000622702 KIF15Q9NS87 1388 aa29.85■■■□□ 2.37
PDLIM2-221ENST00000622702 HFM1A2PYH4 1435 aa29.83■■■□□ 2.37
PDLIM2-221ENST00000622702 RRP7BPQ9NSQ0 103 aa29.83■■■□□ 2.37
PDLIM2-221ENST00000622702 KIF3BO15066 747 aa29.8■■■□□ 2.36
PDLIM2-221ENST00000622702 GGT6Q6P531 493 aa29.8■■■□□ 2.36
PDLIM2-221ENST00000622702 NAIPQ13075 1403 aa29.8■■■□□ 2.36
PDLIM2-221ENST00000622702 DUOX2Q9NRD8 1548 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms