RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 YEATS2Q9ULM3 1422 aa31.25■■■□□ 2.59
LTBP4-239ENST00000622565 ARHGAP5Q13017 1502 aa31.23■■■□□ 2.59
LTBP4-239ENST00000622565 ADAMTSL3P82987 1691 aa31.22■■■□□ 2.59
LTBP4-239ENST00000622565 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
LTBP4-239ENST00000622565 ZFYVE16Q7Z3T8 1539 aa31.2■■■□□ 2.59
LTBP4-239ENST00000622565 CDC42BPBQ9Y5S2 1711 aa31.2■■■□□ 2.58
LTBP4-239ENST00000622565 SIGLEC1Q9BZZ2 1709 aa31.19■■■□□ 2.58
LTBP4-239ENST00000622565 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
LTBP4-239ENST00000622565 MAGI2Q86UL8 1455 aa31.17■■■□□ 2.58
LTBP4-239ENST00000622565 ARID4BQ4LE39 1312 aaPredicted RBP31.17■■■□□ 2.58
LTBP4-239ENST00000622565 PREX2Q70Z35 1606 aa31.16■■■□□ 2.58
LTBP4-239ENST00000622565 LOC105371045A0A1W2PR82 267 aa31.14■■■□□ 2.58
LTBP4-239ENST00000622565 PTPRMP28827 1452 aa31.11■■■□□ 2.57
LTBP4-239ENST00000622565 MADDQ8WXG6 1647 aa31.11■■■□□ 2.57
LTBP4-239ENST00000622565 CDC42BPAQ5VT25 1732 aa31.1■■■□□ 2.57
LTBP4-239ENST00000622565 HECW2Q9P2P5 1572 aa31.1■■■□□ 2.57
LTBP4-239ENST00000622565 ARHGEF12Q9NZN5 1544 aa31.1■■■□□ 2.57
LTBP4-239ENST00000622565 AFAP1Q8N556 730 aa31.1■■■□□ 2.57
LTBP4-239ENST00000622565 ZNF518AQ6AHZ1 1483 aa31.08■■■□□ 2.57
LTBP4-239ENST00000622565 KDM5CP41229 1560 aa31.08■■■□□ 2.57
LTBP4-239ENST00000622565 ABCC1P33527 1531 aa31.07■■■□□ 2.56
LTBP4-239ENST00000622565 GPATCH8Q9UKJ3 1502 aaKnown RBP31.04■■■□□ 2.56
LTBP4-239ENST00000622565 TRAPPC8Q9Y2L5 1435 aa31.04■■■□□ 2.56
LTBP4-239ENST00000622565 ATP10AO60312 1499 aa31.03■■■□□ 2.56
LTBP4-239ENST00000622565 ITSN2Q9NZM3 1697 aa31■■■□□ 2.55
LTBP4-239ENST00000622565 C9orf84Q5VXU9 1444 aa30.99■■■□□ 2.55
LTBP4-239ENST00000622565 MTUS2Q5JR59 1369 aa30.99■■■□□ 2.55
LTBP4-239ENST00000622565 RIMS1Q86UR5 1692 aaKnown RBP30.99■■■□□ 2.55
LTBP4-239ENST00000622565 SAMD9LQ8IVG5 1584 aa30.98■■■□□ 2.55
LTBP4-239ENST00000622565 MLECQ14165 292 aa30.97■■■□□ 2.55
LTBP4-239ENST00000622565 DIP2CQ9Y2E4 1556 aa30.96■■■□□ 2.55
LTBP4-239ENST00000622565 MLH3Q9UHC1 1453 aa30.95■■■□□ 2.55
LTBP4-239ENST00000622565 ZNF777Q9ULD5 760 aaPredicted RBP30.95■■■□□ 2.55
LTBP4-239ENST00000622565 ABCA6Q8N139 1617 aa30.93■■■□□ 2.54
LTBP4-239ENST00000622565 EHBP1L1Q8N3D4 1523 aa30.92■■■□□ 2.54
LTBP4-239ENST00000622565 CCNB3Q8WWL7 1395 aa30.92■■■□□ 2.54
LTBP4-239ENST00000622565 SYCP2Q9BX26 1530 aa30.9■■■□□ 2.54
LTBP4-239ENST00000622565 MYT1LQ9UL68 1186 aa30.9■■■□□ 2.54
LTBP4-239ENST00000622565 TIAM1Q13009 1591 aa30.89■■■□□ 2.54
LTBP4-239ENST00000622565 CFDP1Q9UEE9 299 aaPredicted RBP30.88■■■□□ 2.53
LTBP4-239ENST00000622565 HNRNPMP52272 730 aaKnown RBP eCLIP30.87■■■□□ 2.53
LTBP4-239ENST00000622565 KIDINS220Q9ULH0 1771 aa30.87■■■□□ 2.53
LTBP4-239ENST00000622565 REREQ9P2R6 1566 aa30.86■■■□□ 2.53
LTBP4-239ENST00000622565 VPS8Q8N3P4 1428 aa30.85■■■□□ 2.53
LTBP4-239ENST00000622565 FER1L4A9Z1Z3 1794 aa30.84■■■□□ 2.53
LTBP4-239ENST00000622565 PLPPR3Q6T4P5 718 aa30.83■■■□□ 2.53
LTBP4-239ENST00000622565 KIAA1107Q9UPP5 1409 aa30.81■■■□□ 2.52
LTBP4-239ENST00000622565 ZNF644Q9H582 1327 aaPredicted RBP30.81■■■□□ 2.52
LTBP4-239ENST00000622565 LMTK3Q96Q04 1460 aa30.79■■■□□ 2.52
LTBP4-239ENST00000622565 PLEKHH2Q8IVE3 1493 aa30.78■■■□□ 2.52
LTBP4-239ENST00000622565 NCOA2Q15596 1464 aa30.76■■■□□ 2.52
LTBP4-239ENST00000622565 AGLP35573 1532 aa30.76■■■□□ 2.51
LTBP4-239ENST00000622565 SPAG9O60271 1321 aaKnown RBP30.74■■■□□ 2.51
LTBP4-239ENST00000622565 SUPT6HQ7KZ85 1726 aaKnown RBP30.73■■■□□ 2.51
LTBP4-239ENST00000622565 INO80Q9ULG1 1556 aaPredicted RBP30.72■■■□□ 2.51
LTBP4-239ENST00000622565 MBD5Q9P267 1494 aa30.72■■■□□ 2.51
LTBP4-239ENST00000622565 ATP7AQ04656 1500 aa30.72■■■□□ 2.51
LTBP4-239ENST00000622565 CEBPAP49715 358 aaPredicted RBP30.71■■■□□ 2.51
LTBP4-239ENST00000622565 LRRC9Q6ZRR7 1453 aa30.7■■■□□ 2.51
LTBP4-239ENST00000622565 KANK4Q5T7N3 995 aaPredicted RBP30.67■■■□□ 2.5
LTBP4-239ENST00000622565 HSPA2P54652 639 aa30.63■■■□□ 2.49
LTBP4-239ENST00000622565 MAP3K1Q13233 1512 aa30.63■■■□□ 2.49
LTBP4-239ENST00000622565 CAMSAP2Q08AD1 1489 aa30.62■■■□□ 2.49
LTBP4-239ENST00000622565 PLXNC1O60486 1568 aa30.62■■■□□ 2.49
LTBP4-239ENST00000622565 A2MP01023 1474 aa30.6■■■□□ 2.49
LTBP4-239ENST00000622565 C3P01024 1663 aa30.56■■■□□ 2.48
LTBP4-239ENST00000622565 CCDC141Q6ZP82 1450 aa30.54■■■□□ 2.48
LTBP4-239ENST00000622565 RTEL1-TNFRSF6BF6WH68 1400 aa30.54■■■□□ 2.48
LTBP4-239ENST00000622565 PREX1Q8TCU6 1659 aa30.52■■■□□ 2.48
LTBP4-239ENST00000622565 ADGBQ8N7X0 1667 aa30.52■■■□□ 2.48
LTBP4-239ENST00000622565 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
LTBP4-239ENST00000622565 CNTLNQ9NXG0 1405 aa30.48■■■□□ 2.47
LTBP4-239ENST00000622565 ARHGEF5Q12774 1597 aa30.47■■■□□ 2.47
LTBP4-239ENST00000622565 ILDR1Q86SU0 546 aaPredicted RBP30.47■■■□□ 2.47
LTBP4-239ENST00000622565 DHX29Q7Z478 1369 aaKnown RBP30.44■■■□□ 2.46
LTBP4-239ENST00000622565 RSPH4AQ5TD94 716 aa30.44■■■□□ 2.46
LTBP4-239ENST00000622565 GGT6Q6P531 493 aa30.44■■■□□ 2.46
LTBP4-239ENST00000622565 MYOM3Q5VTT5 1437 aa30.44■■■□□ 2.46
LTBP4-239ENST00000622565 MROH2AA6NES4 1674 aa30.43■■■□□ 2.46
LTBP4-239ENST00000622565 UHRF1BP1Q6BDS2 1440 aa30.43■■■□□ 2.46
LTBP4-239ENST00000622565 ZMYM3Q14202 1370 aa30.42■■■□□ 2.46
LTBP4-239ENST00000622565 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
LTBP4-239ENST00000622565 MIA2Q96PC5 1412 aa30.39■■■□□ 2.46
LTBP4-239ENST00000622565 APLP2Q06481 763 aa30.35■■■□□ 2.45
LTBP4-239ENST00000622565 TSPY4P0CV99 314 aa30.34■■■□□ 2.45
LTBP4-239ENST00000622565 TSPY10P0CW01 314 aa30.34■■■□□ 2.45
LTBP4-239ENST00000622565 MAST1Q9Y2H9 1570 aa30.33■■■□□ 2.45
LTBP4-239ENST00000622565 NPATQ14207 1427 aa30.33■■■□□ 2.45
LTBP4-239ENST00000622565 KIF3BO15066 747 aa30.32■■■□□ 2.44
LTBP4-239ENST00000622565 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
LTBP4-239ENST00000622565 STRCQ7RTU9 1775 aa30.31■■■□□ 2.44
LTBP4-239ENST00000622565 PPP6R1Q9UPN7 881 aa30.3■■■□□ 2.44
LTBP4-239ENST00000622565 PTPRKQ15262 1439 aa30.3■■■□□ 2.44
LTBP4-239ENST00000622565 PTPN23Q9H3S7 1636 aa30.25■■■□□ 2.43
LTBP4-239ENST00000622565 ABCC5O15440 1437 aa30.22■■■□□ 2.43
LTBP4-239ENST00000622565 FGD6Q6ZV73 1430 aa30.22■■■□□ 2.43
LTBP4-239ENST00000622565 MYO3AQ8NEV4 1616 aa30.21■■■□□ 2.43
LTBP4-239ENST00000622565 KDM5DQ9BY66 1539 aa30.21■■■□□ 2.43
LTBP4-239ENST00000622565 TCOF1Q13428 1488 aaKnown RBP30.19■■■□□ 2.42
LTBP4-239ENST00000622565 NCOA1Q15788 1441 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms