RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ITGAEP38570 1179 aa21.39■■□□□ 1.01
CLTCL1-212ENST00000622493 CAMSAP2Q08AD1 1489 aa21.38■■□□□ 1.01
CLTCL1-212ENST00000622493 ARAP3Q8WWN8 1544 aa21.38■■□□□ 1.01
CLTCL1-212ENST00000622493 ZNF644Q9H582 1327 aaPredicted RBP21.36■■□□□ 1.01
CLTCL1-212ENST00000622493 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
CLTCL1-212ENST00000622493 ARHGAP5Q13017 1502 aa21.35■■□□□ 1.01
CLTCL1-212ENST00000622493 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
CLTCL1-212ENST00000622493 EFCAB2Q5VUJ9 269 aa21.32■■□□□ 1
CLTCL1-212ENST00000622493 DAPK1P53355 1430 aa21.31■■□□□ 1
CLTCL1-212ENST00000622493 PLEKHH2Q8IVE3 1493 aa21.31■■□□□ 1
CLTCL1-212ENST00000622493 PTPRKQ15262 1439 aa21.31■■□□□ 1
CLTCL1-212ENST00000622493 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
CLTCL1-212ENST00000622493 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
CLTCL1-212ENST00000622493 ABCC5O15440 1437 aa21.29■■□□□ 1
CLTCL1-212ENST00000622493 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
CLTCL1-212ENST00000622493 GLI2P10070 1586 aa21.27■■□□□ 1
CLTCL1-212ENST00000622493 ARHGEF5Q12774 1597 aa21.27■■□□□ 1
CLTCL1-212ENST00000622493 CD109Q6YHK3 1445 aa21.26■□□□□ 0.99
CLTCL1-212ENST00000622493 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
CLTCL1-212ENST00000622493 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
CLTCL1-212ENST00000622493 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
CLTCL1-212ENST00000622493 SETD5Q9C0A6 1442 aa21.26■□□□□ 0.99
CLTCL1-212ENST00000622493 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
CLTCL1-212ENST00000622493 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
CLTCL1-212ENST00000622493 FANCAO15360 1455 aa21.24■□□□□ 0.99
CLTCL1-212ENST00000622493 HRCP23327 699 aa21.24■□□□□ 0.99
CLTCL1-212ENST00000622493 CROCC2H7BZ55 1655 aa21.23■□□□□ 0.99
CLTCL1-212ENST00000622493 SHANK2Q9UPX8 1470 aa21.23■□□□□ 0.99
CLTCL1-212ENST00000622493 HNRNPMP52272 730 aaKnown RBP eCLIP21.22■□□□□ 0.99
CLTCL1-212ENST00000622493 CCDC141Q6ZP82 1450 aa21.22■□□□□ 0.99
CLTCL1-212ENST00000622493 ABCC1P33527 1531 aa21.21■□□□□ 0.99
CLTCL1-212ENST00000622493 SYCP2Q9BX26 1530 aa21.21■□□□□ 0.99
CLTCL1-212ENST00000622493 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
CLTCL1-212ENST00000622493 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
CLTCL1-212ENST00000622493 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
CLTCL1-212ENST00000622493 MAP3K4Q9Y6R4 1608 aa21.2■□□□□ 0.98
CLTCL1-212ENST00000622493 CFAP74Q9C0B2 1584 aa21.2■□□□□ 0.98
CLTCL1-212ENST00000622493 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
CLTCL1-212ENST00000622493 RAB3GAP2Q9H2M9 1393 aa21.19■□□□□ 0.98
CLTCL1-212ENST00000622493 NAIPQ13075 1403 aa21.19■□□□□ 0.98
CLTCL1-212ENST00000622493 ADGRL2O95490 1459 aa21.19■□□□□ 0.98
CLTCL1-212ENST00000622493 ADGBQ8N7X0 1667 aa21.17■□□□□ 0.98
CLTCL1-212ENST00000622493 GCC2Q8IWJ2 1684 aa21.17■□□□□ 0.98
CLTCL1-212ENST00000622493 ARHGEF12Q9NZN5 1544 aa21.17■□□□□ 0.98
CLTCL1-212ENST00000622493 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
CLTCL1-212ENST00000622493 NCOA1Q15788 1441 aa21.16■□□□□ 0.98
CLTCL1-212ENST00000622493 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
CLTCL1-212ENST00000622493 ANKRD30AQ9BXX3 1397 aa21.15■□□□□ 0.98
CLTCL1-212ENST00000622493 ADGRL1O94910 1474 aa21.14■□□□□ 0.97
CLTCL1-212ENST00000622493 NEO1Q92859 1461 aa21.14■□□□□ 0.97
CLTCL1-212ENST00000622493 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
CLTCL1-212ENST00000622493 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
CLTCL1-212ENST00000622493 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
CLTCL1-212ENST00000622493 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
CLTCL1-212ENST00000622493 SCAPERQ9BY12 1400 aa21.11■□□□□ 0.97
CLTCL1-212ENST00000622493 TRAPPC8Q9Y2L5 1435 aa21.1■□□□□ 0.97
CLTCL1-212ENST00000622493 KIF13AQ9H1H9 1805 aa21.07■□□□□ 0.96
CLTCL1-212ENST00000622493 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
CLTCL1-212ENST00000622493 TEX14Q8IWB6 1497 aa21.06■□□□□ 0.96
CLTCL1-212ENST00000622493 PLXNC1O60486 1568 aa21.05■□□□□ 0.96
CLTCL1-212ENST00000622493 DHX57Q6P158 1386 aaKnown RBP21.05■□□□□ 0.96
CLTCL1-212ENST00000622493 ZNF518AQ6AHZ1 1483 aa21.05■□□□□ 0.96
CLTCL1-212ENST00000622493 AFAP1Q8N556 730 aa21.04■□□□□ 0.96
CLTCL1-212ENST00000622493 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
CLTCL1-212ENST00000622493 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
CLTCL1-212ENST00000622493 CLSPNQ9HAW4 1339 aa21.02■□□□□ 0.96
CLTCL1-212ENST00000622493 ANKRD50Q9ULJ7 1429 aa21.02■□□□□ 0.96
CLTCL1-212ENST00000622493 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
CLTCL1-212ENST00000622493 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
CLTCL1-212ENST00000622493 PPRC1Q5VV67 1664 aaKnown RBP21.01■□□□□ 0.95
CLTCL1-212ENST00000622493 KDM6BO15054 1643 aa21■□□□□ 0.95
CLTCL1-212ENST00000622493 DENND4BO75064 1496 aaPredicted RBP20.99■□□□□ 0.95
CLTCL1-212ENST00000622493 ZFYVE16Q7Z3T8 1539 aa20.99■□□□□ 0.95
CLTCL1-212ENST00000622493 KDM5CP41229 1560 aa20.99■□□□□ 0.95
CLTCL1-212ENST00000622493 INO80Q9ULG1 1556 aaPredicted RBP20.99■□□□□ 0.95
CLTCL1-212ENST00000622493 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
CLTCL1-212ENST00000622493 ATP7AQ04656 1500 aa20.97■□□□□ 0.95
CLTCL1-212ENST00000622493 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
CLTCL1-212ENST00000622493 MLH3Q9UHC1 1453 aa20.95■□□□□ 0.94
CLTCL1-212ENST00000622493 ERBINQ96RT1 1412 aa20.94■□□□□ 0.94
CLTCL1-212ENST00000622493 TRIM52Q96A61 297 aa20.92■□□□□ 0.94
CLTCL1-212ENST00000622493 RICTORQ6R327 1708 aa20.92■□□□□ 0.94
CLTCL1-212ENST00000622493 KIDINS220Q9ULH0 1771 aa20.92■□□□□ 0.94
CLTCL1-212ENST00000622493 HECW2Q9P2P5 1572 aa20.91■□□□□ 0.94
CLTCL1-212ENST00000622493 RAPGEF3O95398 923 aa20.9■□□□□ 0.94
CLTCL1-212ENST00000622493 MYT1LQ9UL68 1186 aa20.9■□□□□ 0.94
CLTCL1-212ENST00000622493 DHX29Q7Z478 1369 aaKnown RBP20.86■□□□□ 0.93
CLTCL1-212ENST00000622493 FRMPD1Q5SYB0 1578 aa20.86■□□□□ 0.93
CLTCL1-212ENST00000622493 ZMYM4Q5VZL5 1548 aa20.86■□□□□ 0.93
CLTCL1-212ENST00000622493 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
CLTCL1-212ENST00000622493 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
CLTCL1-212ENST00000622493 MAGI2Q86UL8 1455 aa20.84■□□□□ 0.93
CLTCL1-212ENST00000622493 TRHP20396 242 aaPredicted RBP20.84■□□□□ 0.93
CLTCL1-212ENST00000622493 UNC13BO14795 1591 aa20.83■□□□□ 0.92
CLTCL1-212ENST00000622493 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.92
CLTCL1-212ENST00000622493 NUP155O75694 1391 aa20.82■□□□□ 0.92
CLTCL1-212ENST00000622493 A2MP01023 1474 aa20.82■□□□□ 0.92
CLTCL1-212ENST00000622493 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
CLTCL1-212ENST00000622493 PZPP20742 1482 aa20.81■□□□□ 0.92
CLTCL1-212ENST00000622493 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms