RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 MCCP23508 829 aa15.53■□□□□ 0.08
SLC6A6-210ENST00000622186 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
SLC6A6-210ENST00000622186 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.07
SLC6A6-210ENST00000622186 TAF7LQ5H9L4 462 aa15.52■□□□□ 0.07
SLC6A6-210ENST00000622186 RASSF8Q8NHQ8 419 aa15.51■□□□□ 0.07
SLC6A6-210ENST00000622186 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
SLC6A6-210ENST00000622186 NAP1L5Q96NT1 182 aaPredicted RBP15.51■□□□□ 0.07
SLC6A6-210ENST00000622186 MARCH6O60337 910 aa15.5■□□□□ 0.07
SLC6A6-210ENST00000622186 TCEAL9Q9UHQ7 104 aa15.49■□□□□ 0.07
SLC6A6-210ENST00000622186 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
SLC6A6-210ENST00000622186 CREBRFQ8IUR6 639 aa15.48■□□□□ 0.07
SLC6A6-210ENST00000622186 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
SLC6A6-210ENST00000622186 SRPK2P78362 688 aaKnown RBP15.47■□□□□ 0.07
SLC6A6-210ENST00000622186 RGS3P49796 1198 aa15.47■□□□□ 0.07
SLC6A6-210ENST00000622186 MS4A1P11836 297 aa15.46■□□□□ 0.06
SLC6A6-210ENST00000622186 PPM1FP49593 454 aaPredicted RBP15.44■□□□□ 0.06
SLC6A6-210ENST00000622186 KIAA1211Q6ZU35 1233 aa15.44■□□□□ 0.06
SLC6A6-210ENST00000622186 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
SLC6A6-210ENST00000622186 APBB1O00213 710 aa15.44■□□□□ 0.06
SLC6A6-210ENST00000622186 EVA1CP58658 441 aa15.43■□□□□ 0.06
SLC6A6-210ENST00000622186 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
SLC6A6-210ENST00000622186 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
SLC6A6-210ENST00000622186 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
SLC6A6-210ENST00000622186 STK26Q9P289 416 aa15.39■□□□□ 0.05
SLC6A6-210ENST00000622186 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
SLC6A6-210ENST00000622186 CC2D1BQ5T0F9 858 aaKnown RBP15.38■□□□□ 0.05
SLC6A6-210ENST00000622186 HSCBQ8IWL3 235 aa15.38■□□□□ 0.05
SLC6A6-210ENST00000622186 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
SLC6A6-210ENST00000622186 CCAR1Q8IX12 1150 aaKnown RBP15.37■□□□□ 0.05
SLC6A6-210ENST00000622186 PAXIP1Q6ZW49 1069 aaPredicted RBP15.37■□□□□ 0.05
SLC6A6-210ENST00000622186 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
SLC6A6-210ENST00000622186 TPM4P67936 248 aa15.36■□□□□ 0.05
SLC6A6-210ENST00000622186 PAF1Q8N7H5 531 aa15.36■□□□□ 0.05
SLC6A6-210ENST00000622186 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
SLC6A6-210ENST00000622186 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
SLC6A6-210ENST00000622186 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.35■□□□□ 0.058e-7■■■■■ 68.8
SLC6A6-210ENST00000622186 FOXD1Q16676 465 aa15.34■□□□□ 0.05
SLC6A6-210ENST00000622186 KANK1Q14678 1352 aa15.33■□□□□ 0.05
SLC6A6-210ENST00000622186 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.05
SLC6A6-210ENST00000622186 MSNP26038 577 aaKnown RBP15.33■□□□□ 0.04
SLC6A6-210ENST00000622186 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
SLC6A6-210ENST00000622186 HDGFL2Q7Z4V5 671 aaPredicted RBP15.31■□□□□ 0.04
SLC6A6-210ENST00000622186 GOLGA6L1Q8N7Z2 621 aa15.31■□□□□ 0.04
SLC6A6-210ENST00000622186 MORC1Q86VD1 984 aa15.3■□□□□ 0.04
SLC6A6-210ENST00000622186 GPATCH3Q96I76 525 aa15.29■□□□□ 0.04
SLC6A6-210ENST00000622186 PES1O00541 588 aaKnown RBP15.29■□□□□ 0.04
SLC6A6-210ENST00000622186 LTV1Q96GA3 475 aaPredicted RBP15.29■□□□□ 0.04
SLC6A6-210ENST00000622186 GGT6Q6P531 493 aa15.28■□□□□ 0.04
SLC6A6-210ENST00000622186 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
SLC6A6-210ENST00000622186 NOL10Q9BSC4 688 aaKnown RBP15.27■□□□□ 0.04
SLC6A6-210ENST00000622186 TPM3P06753 285 aa15.26■□□□□ 0.03
SLC6A6-210ENST00000622186 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
SLC6A6-210ENST00000622186 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
SLC6A6-210ENST00000622186 AMOTL1Q8IY63 956 aa15.24■□□□□ 0.03
SLC6A6-210ENST00000622186 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
SLC6A6-210ENST00000622186 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
SLC6A6-210ENST00000622186 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
SLC6A6-210ENST00000622186 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
SLC6A6-210ENST00000622186 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
SLC6A6-210ENST00000622186 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
SLC6A6-210ENST00000622186 TMF1P82094 1093 aa15.22■□□□□ 0.03
SLC6A6-210ENST00000622186 TPD52L1Q16890 204 aaPredicted RBP15.22■□□□□ 0.03
SLC6A6-210ENST00000622186 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
SLC6A6-210ENST00000622186 PATL2C9JE40 543 aaKnown RBP15.21■□□□□ 0.03
SLC6A6-210ENST00000622186 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
SLC6A6-210ENST00000622186 CCDC43Q96MW1 224 aaKnown RBP15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 AK7Q96M32 723 aa15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
SLC6A6-210ENST00000622186 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
SLC6A6-210ENST00000622186 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
SLC6A6-210ENST00000622186 AKAP17AQ02040 695 aaKnown RBP15.19■□□□□ 0.02
SLC6A6-210ENST00000622186 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
SLC6A6-210ENST00000622186 CALD1Q05682 793 aaKnown RBP15.18■□□□□ 0.02
SLC6A6-210ENST00000622186 TPM2P07951 284 aa15.18■□□□□ 0.02
SLC6A6-210ENST00000622186 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
SLC6A6-210ENST00000622186 ARID3AQ99856 593 aa15.17■□□□□ 0.02
SLC6A6-210ENST00000622186 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
SLC6A6-210ENST00000622186 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
SLC6A6-210ENST00000622186 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
SLC6A6-210ENST00000622186 SLC4A10Q6U841 1118 aa15.15■□□□□ 0.02
SLC6A6-210ENST00000622186 AMPHP49418 695 aa15.15■□□□□ 0.02
SLC6A6-210ENST00000622186 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
SLC6A6-210ENST00000622186 ITPRIPQ8IWB1 547 aa15.15■□□□□ 0.02
SLC6A6-210ENST00000622186 NUTM2DQ5VT03 806 aaPredicted RBP15.14■□□□□ 0.01
SLC6A6-210ENST00000622186 B4GALNT3Q6L9W6 998 aa15.14■□□□□ 0.01
SLC6A6-210ENST00000622186 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
SLC6A6-210ENST00000622186 NOL8Q76FK4 1167 aaKnown RBP15.13■□□□□ 0.01
SLC6A6-210ENST00000622186 CCDC97Q96F63 343 aaPredicted RBP15.13■□□□□ 0.01
SLC6A6-210ENST00000622186 SYAP1Q96A49 352 aaPredicted RBP15.12■□□□□ 0.01
SLC6A6-210ENST00000622186 VPS37DQ86XT2 251 aa15.12■□□□□ 0.01
SLC6A6-210ENST00000622186 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
SLC6A6-210ENST00000622186 U2AF1L5P0DN76 240 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 U2AF1Q01081 240 aaKnown RBP eCLIP15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 NUTM2BA6NNL0 878 aaPredicted RBP15.11■□□□□ 0.01
SLC6A6-210ENST00000622186 NUTM2EB1AL46 878 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms