RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 FANCAO15360 1455 aa27.18■■□□□ 1.94
SLC6A6-209ENST00000622176 PREX2Q70Z35 1606 aa27.16■■□□□ 1.94
SLC6A6-209ENST00000622176 CDC42BPAQ5VT25 1732 aa27.16■■□□□ 1.94
SLC6A6-209ENST00000622176 ARHGAP5Q13017 1502 aa27.15■■□□□ 1.94
SLC6A6-209ENST00000622176 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
SLC6A6-209ENST00000622176 CFDP1Q9UEE9 299 aaPredicted RBP27.13■■□□□ 1.93
SLC6A6-209ENST00000622176 CFAP74Q9C0B2 1584 aa27.13■■□□□ 1.93
SLC6A6-209ENST00000622176 AKNAQ7Z591 1439 aa27.12■■□□□ 1.93
SLC6A6-209ENST00000622176 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.93
SLC6A6-209ENST00000622176 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
SLC6A6-209ENST00000622176 MYOM3Q5VTT5 1437 aa27.07■■□□□ 1.92
SLC6A6-209ENST00000622176 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
SLC6A6-209ENST00000622176 ADGRL1O94910 1474 aa27.04■■□□□ 1.92
SLC6A6-209ENST00000622176 MIA2Q96PC5 1412 aa27.03■■□□□ 1.92
SLC6A6-209ENST00000622176 ZNF777Q9ULD5 760 aaPredicted RBP27.03■■□□□ 1.92
SLC6A6-209ENST00000622176 SCAPERQ9BY12 1400 aa27.01■■□□□ 1.91
SLC6A6-209ENST00000622176 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.91
SLC6A6-209ENST00000622176 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
SLC6A6-209ENST00000622176 PLEKHH2Q8IVE3 1493 aa27■■□□□ 1.91
SLC6A6-209ENST00000622176 ZNF644Q9H582 1327 aaPredicted RBP26.99■■□□□ 1.91
SLC6A6-209ENST00000622176 ABCC1P33527 1531 aa26.99■■□□□ 1.91
SLC6A6-209ENST00000622176 KIAA1107Q9UPP5 1409 aa26.99■■□□□ 1.91
SLC6A6-209ENST00000622176 ARHGEF12Q9NZN5 1544 aa26.96■■□□□ 1.91
SLC6A6-209ENST00000622176 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
SLC6A6-209ENST00000622176 FGD6Q6ZV73 1430 aa26.96■■□□□ 1.91
SLC6A6-209ENST00000622176 POGZQ7Z3K3 1410 aa26.94■■□□□ 1.9
SLC6A6-209ENST00000622176 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
SLC6A6-209ENST00000622176 HNRNPMP52272 730 aaKnown RBP eCLIP26.92■■□□□ 1.9
SLC6A6-209ENST00000622176 SYCP2Q9BX26 1530 aa26.91■■□□□ 1.9
SLC6A6-209ENST00000622176 FRMPD1Q5SYB0 1578 aa26.91■■□□□ 1.9
SLC6A6-209ENST00000622176 TRAPPC8Q9Y2L5 1435 aa26.9■■□□□ 1.9
SLC6A6-209ENST00000622176 MBD5Q9P267 1494 aa26.9■■□□□ 1.9
SLC6A6-209ENST00000622176 RICTORQ6R327 1708 aa26.9■■□□□ 1.9
SLC6A6-209ENST00000622176 TCOF1Q13428 1488 aaKnown RBP26.88■■□□□ 1.89
SLC6A6-209ENST00000622176 ZNF518AQ6AHZ1 1483 aa26.88■■□□□ 1.89
SLC6A6-209ENST00000622176 PTPN23Q9H3S7 1636 aa26.88■■□□□ 1.89
SLC6A6-209ENST00000622176 AFAP1Q8N556 730 aa26.88■■□□□ 1.89
SLC6A6-209ENST00000622176 RSPH4AQ5TD94 716 aa26.86■■□□□ 1.89
SLC6A6-209ENST00000622176 ZMYM4Q5VZL5 1548 aa26.84■■□□□ 1.89
SLC6A6-209ENST00000622176 KDM5CP41229 1560 aa26.84■■□□□ 1.89
SLC6A6-209ENST00000622176 KDM4FA0A1W2PPD8 638 aa26.82■■□□□ 1.88
SLC6A6-209ENST00000622176 ARHGEF5Q12774 1597 aa26.82■■□□□ 1.88
SLC6A6-209ENST00000622176 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
SLC6A6-209ENST00000622176 CCDC141Q6ZP82 1450 aa26.8■■□□□ 1.88
SLC6A6-209ENST00000622176 RRBP1Q9P2E9 1410 aaKnown RBP26.79■■□□□ 1.88
SLC6A6-209ENST00000622176 MLH3Q9UHC1 1453 aa26.79■■□□□ 1.88
SLC6A6-209ENST00000622176 FAM50AQ14320 339 aaKnown RBP26.78■■□□□ 1.88
SLC6A6-209ENST00000622176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.77■■□□□ 1.88
SLC6A6-209ENST00000622176 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
SLC6A6-209ENST00000622176 ABCC5O15440 1437 aa26.74■■□□□ 1.87
SLC6A6-209ENST00000622176 HECW2Q9P2P5 1572 aa26.73■■□□□ 1.87
SLC6A6-209ENST00000622176 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
SLC6A6-209ENST00000622176 ZFYVE16Q7Z3T8 1539 aa26.72■■□□□ 1.87
SLC6A6-209ENST00000622176 TSPY4P0CV99 314 aa26.72■■□□□ 1.87
SLC6A6-209ENST00000622176 TSPY10P0CW01 314 aa26.72■■□□□ 1.87
SLC6A6-209ENST00000622176 RTEL1-TNFRSF6BF6WH68 1400 aa26.71■■□□□ 1.87
SLC6A6-209ENST00000622176 DAPK1P53355 1430 aa26.71■■□□□ 1.87
SLC6A6-209ENST00000622176 DNMT1P26358 1616 aaKnown RBP26.7■■□□□ 1.86
SLC6A6-209ENST00000622176 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
SLC6A6-209ENST00000622176 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
SLC6A6-209ENST00000622176 INO80Q9ULG1 1556 aaPredicted RBP26.69■■□□□ 1.86
SLC6A6-209ENST00000622176 ATP7AQ04656 1500 aa26.68■■□□□ 1.86
SLC6A6-209ENST00000622176 KIDINS220Q9ULH0 1771 aa26.68■■□□□ 1.86
SLC6A6-209ENST00000622176 SHANK2Q9UPX8 1470 aa26.68■■□□□ 1.86
SLC6A6-209ENST00000622176 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
SLC6A6-209ENST00000622176 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
SLC6A6-209ENST00000622176 ATP10AO60312 1499 aa26.64■■□□□ 1.86
SLC6A6-209ENST00000622176 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
SLC6A6-209ENST00000622176 DIP2CQ9Y2E4 1556 aa26.63■■□□□ 1.85
SLC6A6-209ENST00000622176 ABCA6Q8N139 1617 aa26.62■■□□□ 1.85
SLC6A6-209ENST00000622176 PTPRKQ15262 1439 aa26.6■■□□□ 1.85
SLC6A6-209ENST00000622176 REREQ9P2R6 1566 aa26.57■■□□□ 1.84
SLC6A6-209ENST00000622176 CHIC2Q9UKJ5 165 aa26.56■■□□□ 1.84
SLC6A6-209ENST00000622176 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
SLC6A6-209ENST00000622176 ITGAEP38570 1179 aa26.55■■□□□ 1.84
SLC6A6-209ENST00000622176 PLXNC1O60486 1568 aa26.54■■□□□ 1.84
SLC6A6-209ENST00000622176 ANKRD30AQ9BXX3 1397 aa26.54■■□□□ 1.84
SLC6A6-209ENST00000622176 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
SLC6A6-209ENST00000622176 A2MP01023 1474 aa26.54■■□□□ 1.84
SLC6A6-209ENST00000622176 ROCK1Q13464 1354 aa26.52■■□□□ 1.84
SLC6A6-209ENST00000622176 DHX29Q7Z478 1369 aaKnown RBP26.52■■□□□ 1.84
SLC6A6-209ENST00000622176 ADGBQ8N7X0 1667 aa26.52■■□□□ 1.84
SLC6A6-209ENST00000622176 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
SLC6A6-209ENST00000622176 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
SLC6A6-209ENST00000622176 AGLP35573 1532 aa26.49■■□□□ 1.83
SLC6A6-209ENST00000622176 SIGLEC1Q9BZZ2 1709 aa26.48■■□□□ 1.83
SLC6A6-209ENST00000622176 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
SLC6A6-209ENST00000622176 DUOX2Q9NRD8 1548 aa26.46■■□□□ 1.83
SLC6A6-209ENST00000622176 BCORL1Q5H9F3 1711 aa26.43■■□□□ 1.82
SLC6A6-209ENST00000622176 ADAMTSL3P82987 1691 aa26.43■■□□□ 1.82
SLC6A6-209ENST00000622176 ERBINQ96RT1 1412 aa26.39■■□□□ 1.82
SLC6A6-209ENST00000622176 KIF3BO15066 747 aa26.37■■□□□ 1.81
SLC6A6-209ENST00000622176 ANKRD50Q9ULJ7 1429 aa26.36■■□□□ 1.81
SLC6A6-209ENST00000622176 MLECQ14165 292 aa26.35■■□□□ 1.81
SLC6A6-209ENST00000622176 EIF2AK4Q9P2K8 1649 aaKnown RBP26.35■■□□□ 1.81
SLC6A6-209ENST00000622176 MADDQ8WXG6 1647 aa26.34■■□□□ 1.81
SLC6A6-209ENST00000622176 HFM1A2PYH4 1435 aa26.33■■□□□ 1.81
SLC6A6-209ENST00000622176 NAIPQ13075 1403 aa26.32■■□□□ 1.8
SLC6A6-209ENST00000622176 GGT6Q6P531 493 aa26.31■■□□□ 1.8
SLC6A6-209ENST00000622176 PPP6R1Q9UPN7 881 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms